Using GIS to Delineate Headwater Stream Origins in the Appalachian Coalfields of Kentucky

Headwater streams have a significant nexus or physical, chemical, and/or biological connection to downstream reaches. Generally, defined as 1st‐3rd order with ephemeral, intermittent, or perennial flow regimes, these streams account for a substantial portion of the total stream network particularly in mountainous terrain. Due to their often remote locations, small size, and large numbers, conducting field inventories of headwater streams is challenging. A means of estimating headwater stream location and extent according to flow regime type using publicly available spatial data is needed to simplify this complex process. Using field‐collected headwater point of origin data from three control watersheds, streams were characterized according to a set of spatial parameters related to topography, geology, and soils. These parameters were (1) compared to field‐collected point of origin data listed in three nearby Jurisdictional Determinations, (2) used to develop a geographic information system (GIS)‐based stream network for identifying ephemeral, intermittent, and perennial streams, and (3) applied to a larger watershed and compared to values obtained using the high‐resolution National Hydrography Dataset (NHD). The parameters drainage area and local valley slope were the most reliable predictors of flow regime type. Results showed the high‐resolution NHD identified no ephemeral streams and 9 and 65% fewer intermittent and perennial streams, respectively, than the GIS model.     

Biophysical‐Regulatory Classification and Profiling of Streams Across Management Units and Ecoregions1

Caruso, Brian S. and Joshua Haynes, 2011. Biophysical‐Regulatory Classification and Profiling of Streams Across Management Units and Ecoregions. Journal of the American Water Resources Association (JAWRA) 00(0):1‐22. DOI: 10.1111/j.1752‐1688.2010.00522.x Abstract: Aquatic resources management in the United States (U.S.) under Clean Water Act Section 404 has become more complex after recent Supreme Court decisions and U.S. Army Corps of Engineers and Environmental Protection Agency (USEPA) guidance. Many intermittent/ephemeral and headwater streams may not be jurisdictional if they lack a significant nexus with navigable waters. Streams in semiarid USEPA Region 8 were classified based on hydrologic permanence and stream order using National Hydrography Dataset (NHD) Plus and GIS to provide information across broad spatial scales to aid with jurisdictional determinations (JDs). Four classes were developed for profiling across management units and ecoregions. Based on medium‐resolution NHDPlus data, intermittent streams comprise >¾, and first order streams constitute >½ of the total stream length in Region 8. Mountain states and ecoregions have the largest percentage of perennial first order streams, whereas the Dakotas, plains, and desert ecoregions have the greatest percentages of intermittent first order and intermittent higher order streams. In the Upper Colorado River Basin, >50% of reaches are intermittent first order, and 9% are perennial first order. NHDPlus data can significantly underestimate the length of headwater and intermittent streams, but can still be a valuable tool to help develop stream classes and for regional JD planning and analysis. Refinement of the stream classes using high resolution NHD data and other key catchment parameters can improve their utility for JDs.     

Modeling Streams and Hydrogeomorphic Attributes in Oregon From Digital and Field Data1

Abstract: Managers, regulators, and researchers of aquatic ecosystems are increasingly pressed to consider large areas. However, accurate stream maps with geo‐referenced attributes are uncommon over relevant spatial extents. Field inventories provide high‐quality data, particularly for habitat characteristics at fine spatial resolutions (e.g., large wood), but are costly and so cover relatively small areas. Recent availability of regional digital data and Geographic Information Systems software has advanced capabilities to delineate stream networks and estimate coarse‐resolution hydrogeomorphic attributes (e.g., gradient). A spatially comprehensive coverage results, but types of modeled outputs may be limited and their accuracy is typically unknown. Capitalizing on strengths in both field and regional digital data, we modeled a synthetic stream network and a variety of hydrogeomorphic attributes for the Oregon Coastal Province. The synthetic network, encompassing 96,000 km of stream, was derived from digital elevation data. We used high‐resolution but spatially restricted data from field inventories and streamflow gauges to evaluate, calibrate, and interpret hydrogeomorphic attributes modeled from digital elevation and precipitation data. The attributes we chose to model (drainage area, mean annual precipitation, mean annual flow, probability of perennial flow, channel gradient, active‐channel width and depth, valley‐floor width, valley‐width index, and valley constraint) have demonstrated value for stream research and management. For most of these attributes, field‐measured, and modeled values were highly correlated, yielding confidence in the modeled outputs. The modeled stream network and attributes have been used for a variety of purposes, including mapping riparian areas, identifying headwater streams likely to transport debris flows, and characterizing the potential of streams to provide high‐quality habitat for salmonids. Our framework and models can be adapted and applied to areas where the necessary field and digital data exist or can be obtained.     

Hydrography Change Detection: The Usefulness of Surface Channels Derived From LiDAR DEMs for Updating Mapped Hydrography1

Abstract: The 1:24,000‐scale high‐resolution National Hydrography Dataset (NHD) mapped hydrography flow lines require regular updating because land surface conditions that affect surface channel drainage change over time. Historically, NHD flow lines were created by digitizing surface water information from aerial photography and paper maps. Using these same methods to update nationwide NHD flow lines is costly and inefficient; furthermore, these methods result in hydrography that lacks the horizontal and vertical accuracy needed for fully integrated datasets useful for mapping and scientific investigations. Effective methods for improving mapped hydrography employ change detection analysis of surface channels derived from light detection and ranging (LiDAR) digital elevation models (DEMs) and NHD flow lines. In this article, we describe the usefulness of surface channels derived from LiDAR DEMs for hydrography change detection to derive spatially accurate and time‐relevant mapped hydrography. The methods employ analyses of horizontal and vertical differences between LiDAR‐derived surface channels and NHD flow lines to define candidate locations of hydrography change. These methods alleviate the need to analyze and update the nationwide NHD for time relevant hydrography, and provide an avenue for updating the dataset where change has occurred.     

Estimating Contributions of Nitrate and Herbicides From Groundwater to Headwater Streams,Northern Atlantic Coastal Plain,United States1

Abstract: Groundwater transport often complicates understanding of surface‐water contamination. We estimated the regional flux of nitrate and selected herbicides from groundwater to nontidal headwater streams of the Atlantic Coastal Plain (New Jersey through North Carolina) based on late‐winter or spring base‐flow samples from 174 streams. Sampled streams were selected randomly, and flux estimates are based on resulting population estimates rather than on empirical models, which have been used previously for similar estimates. Base‐flow flux in the estimated 8,834 headwater streams of the study area are an estimated 21,200 kg/day of nitrate (as N) and 5.83, 0.565, and 20.7 kg/day of alachlor, atrazine, and metolachlor (and selected degradates), respectively. Base‐flow flux of alachlor and metolachlor is <3% of the total base‐flow flux of those compounds plus degradates. Base‐flow flux of nitrate and herbicides as a percentage of applications is typically highest in well‐drained areas and lowest in areas with abundant poor drainage and anoxic conditions. In Coastal Plain watersheds of Albemarle and Pamlico Sounds, <2% of applied nitrogen reaches headwater streams as base flow. On the Delmarva Peninsula part of the Chesapeake Bay watershed, however, more than 10% of such applications are transported through groundwater to streams, and base‐flow nitrate flux represents 70% of total nitrogen flux in headwater streams.     

Channel and Perennial Flow Initiation in Headwater Streams: Management Implications of Variability in Source-Area Size

Despite increasing attention to management of headwater streams as sources of water, sediment, and wood to downstream rivers, the extent of headwater channels and perennial flow remain poorly known and inaccurately depicted on topographic maps and in digital hydrographic data. This study reports field mapping of channel head and perennial flow initiation locations in forested landscapes underlain by sandstone and basalt lithologies in Washington State, USA. Contributing source areas were delineated for each feature using a digital elevation model (DEM) as well as a Global Positioning System device in the field. Systematic source area–slope relationships described in other landscapes were not evident for channel heads in either lithology. In addition, substantial variability in DEM-derived source area sizes relative to field-delineated source areas indicates that in this area, identification of an area–slope relationship, should one even exist, would be difficult. However, channel heads and stream heads, here defined as the start of perennial flow, appear to be co-located within both of the lithologies, which together with lateral expansion and contraction of surface water around channel heads on a seasonal cycle in the basalt lithology, suggest a controlling influence of bedrock springs for that location. While management strategies for determining locations of channel heads and perennial flow initiation in comparable areas could assign standard source area sizes based on limited field data collection within that landscape, field-mapped source areas that support perennial flow are much smaller than recognized by current Washington State regulations.     

A Spatially Explicit Model for Mapping Headwater Streams

Headwater streams are the primary sources of water in a drainage network and serve as a critical hydrologic link between the surrounding landscape and larger, downstream surface waters. Many states, including North Carolina, regulate activity in and near headwater streams for the protection of water quality and aquatic resources. A fundamental tool for regulatory management is an accurate representation of streams on a map. Limited resources preclude field mapping every headwater stream and its origin across a large region. It is more practical to develop a model for headwater streams based on a sample of field data that can then be extrapolated to a larger area of interest. The North Carolina Division of Water Quality has developed a cost‐effective method for modeling and mapping the location, length, and flow classification (intermittent and perennial) of headwater streams. We used a multiple logistic regression approach that combined field data and terrain derivatives for watersheds located in the Triassic Basins ecoregion. Field data were collected using a standard methodology for identifying headwater streams and origins. Terrain derivatives were generated from digital elevation models interpolated from bare‐earth Light Detection and Range data. Model accuracies greater than 80% were achieved in classifying stream presence and absence, stream length and perennial stream length, but were not as consistent in predicting intermittent stream length.     

The Role of Headwater Streams in Downstream Water Quality1

Abstract: Knowledge of headwater influences on the water‐quality and flow conditions of downstream waters is essential to water‐resource management at all governmental levels; this includes recent court decisions on the jurisdiction of the Federal Clean Water Act (CWA) over upland areas that contribute to larger downstream water bodies. We review current watershed research and use a water‐quality model to investigate headwater influences on downstream receiving waters. Our evaluations demonstrate the intrinsic connections of headwaters to landscape processes and downstream waters through their influence on the supply, transport, and fate of water and solutes in watersheds. Hydrological processes in headwater catchments control the recharge of subsurface water stores, flow paths, and residence times of water throughout landscapes. The dynamic coupling of hydrological and biogeochemical processes in upland streams further controls the chemical form, timing, and longitudinal distances of solute transport to downstream waters. We apply the spatially explicit, mass‐balance watershed model SPARROW to consider transport and transformations of water and nutrients throughout stream networks in the northeastern United States. We simulate fluxes of nitrogen, a primary nutrient that is a water‐quality concern for acidification of streams and lakes and eutrophication of coastal waters, and refine the model structure to include literature observations of nitrogen removal in streams and lakes. We quantify nitrogen transport from headwaters to downstream navigable waters, where headwaters are defined within the model as first‐order, perennial streams that include flow and nitrogen contributions from smaller, intermittent and ephemeral streams. We find that first‐order headwaters contribute approximately 70% of the mean‐annual water volume and 65% of the nitrogen flux in second‐order streams. Their contributions to mean water volume and nitrogen flux decline only marginally to about 55% and 40% in fourth‐ and higher‐order rivers that include navigable waters and their tributaries. These results underscore the profound influence that headwater areas have on shaping downstream water quantity and water quality. The results have relevance to water‐resource management and regulatory decisions and potentially broaden understanding of the spatial extent of Federal CWA jurisdiction in U.S. waters.     

Extent and Channel Morphology of Unmapped Headwater Stream Segments of the Quabbin Watershed,Massachusetts1

Brooks, Robert T. and Elizabeth A. Colburn, 2011. Extent and Channel Morphology of Unmapped Headwater Stream Segments of the Quabbin Watershed, Massachusetts. Journal of the American Water Resources Association (JAWRA) 47(1):158‐168. DOI: 10.1111/j.1752‐1688.2010.00499.x Abstract: Effective regulatory protection and management of headwater resources depend on consistent and accurate identification and delineation of stream occurrence. Published maps and digital resources fail to represent the true occurrence and extent of headwater streams. This study assessed the accuracy of mapped origins of “blue‐line” streams depicted on U.S. Geological Survey topographic maps, and, if present, the morphological characteristics of unmapped stream segments. We identified 170 mapped stream origins on the Quabbin Reservoir watershed, Massachusetts. Of 30 mapped stream origins, we identified and examined 26 unmapped stream segments above 25, with an average length of 502 m. Twenty unmapped tributaries occurred on 10 of the 26 unmapped segments, with an average length of 127 m. Wetland reaches occurred more frequently and were larger on unmapped than on mapped stream segments. A significant and complex stream network occurs above most mapped stream origins. For the Quabbin watershed, we estimate that there are 85.8 km of unmapped stream upgradient of 314.5 km of mapped streams. Reliance on mapped stream networks for regulatory standards allows for the potential disturbance or even destruction of the unmapped stream resources. Jurisdictional regulations and guidelines should be revised so that the occurrence of streams should require field validation.     

Summer Temperature Patterns in Headwater Streams of the Oregon Coast Range1

Abstract: Cool summertime stream temperature is an important component of high quality aquatic habitat in Oregon coastal streams. Within the Oregon Coast Range, small headwater streams make up a majority of the stream network; yet, little information is available on temperature patterns and the longitudinal variability for these streams. In this paper we describe preharvest spatial and temporal patterns in summer stream temperature for small streams of the Oregon Coast Range in forests managed for timber production. We also explore relationships between stream and riparian attributes and observed stream temperature conditions and patterns. Summer stream temperature, channel, and riparian data were collected on 36 headwater streams in 2002, 2003, and 2004. Mean stream temperatures were consistent among summers and generally warmed in a downstream direction. However, longitudinal trends in maximum temperatures were more variable. At the reach scale of 0.5‐1.7 km, maximum temperatures increased in 17 streams, decreased in seven streams and did not change in three reaches. At the subreach scale (0.1‐1.5 km), maximum temperatures increased in 28 subreaches, decreased in 14, and did not change in 12 subreaches. Models of increasing temperature in a downstream direction may oversimplify fine‐scale patterns in small streams. Stream and riparian attributes that correlated with observed temperature patterns included cover, channel substrate, channel gradient, instream wood jam volume, riparian stand density, and geology type. Longitudinal patterns of stream temperature are an important consideration for background characterization of water quality. Studies attempting to evaluate stream temperature response to timber harvest or other modifications should quantify variability in longitudinal patterns of stream temperature prior to logging.     

Physical and Temporal Isolation of Mountain Headwater Streams in the Western Mojave Desert,Southern California1

Abstract: Streams draining mountain headwater areas of the western Mojave Desert are commonly physically isolated from downstream hydrologic systems such as springs, playa lakes, wetlands, or larger streams and rivers by stream reaches that are dry much of the time. The physical isolation of surface flow in these streams may be broken for brief periods after rainfall or snowmelt when runoff is sufficient to allow flow along the entire stream reach. Despite the physical isolation of surface flow in these streams, they are an integral part of the hydrologic cycle. Water infiltrated from headwater streams moves through the unsaturated zone to recharge the underlying ground‐water system and eventually discharges to support springs, streamflow, isolated wetlands, or native vegetation. Water movement through thick unsaturated zones may require several hundred years and subsequent movement through the underlying ground‐water systems may require many thousands of years – contributing to the temporal isolation of mountain headwater streams.     

GEOMORPHOLOGY OF STEEPLAND HEADWATERS: THE TRANSITION FROM HILLSLOPES TO CHANNELS1

Headwater streams comprise 60 to 80 percent of the cumulative length of river networks. In hilly to mountainous terrain, they reflect a mix of hillslope and channel processes because of their close proximity to sediment source areas. Their morphology is an assemblage of residual soils, landslide deposits, wood, boulders, thin patches of poorly sorted alluvium, and stretches of bedrock. Longitudinal profiles of these channels are strongly influenced by steps created by sediment deposits, large wood, and boulders. Due to the combination of small drainage area, stepped shallow gradient, large roughness elements, and cohesive sediments, headwater streams typically transport little sediment or coarse wood debris by fluvial processes. Consequently, headwaters act as sediment reservoirs for periods spanning decades to centuries. The accumulated sediment and wood may be episodically evacuated by debris flows, debris floods, or gully erosion and transported to larger channels. In mountain environments, these processes deliver significant amounts of materials that form riverine habitats in larger channels. In managed steepland forests, accelerated rates of landslides and debris flows resulting from the harvest of headwater forests have the potential to seriously impact the morphology of headwater streams and downstream resources.     

A Validation Study of a Rapid Field-Based Rating System for Discriminating Among Flow Permanence Classes of Headwater Streams in South Carolina

Rapid field-based protocols for classifying flow permanence of headwater streams are needed to inform timely regulatory decisions. Such an existing method was developed for and has been used in North Carolina since 1998. The method uses ordinal scoring of 26 geomorphology, hydrology, and biology attributes of streams. The attribute scores are summed and compared to threshold scores to assign a flow permanence class. Our study objective was to evaluate the method’s ability to classify the flow permanence of forested stream reaches from Piedmont and Southeastern Plains ecoregions in South Carolina. Ephemeral reaches scored significantly lower than intermittent and perennial reaches, but scores from intermittent and perennial reaches did not differ. Scores collected in the dry and wet seasons were strongly correlated, indicating that the method was seasonally stable. Scores had positive nonlinear relationships with the maximum recorded wet duration and the proportion of the record that reaches were wet, but were not related to drying frequency. Scores of the presence of baseflow in the dry season were more important in flow permanence classification than those from the wet season. Other important attributes and parameters in discriminating flow classes were macrobenthos, rooted upland plants, bankfull width, drainage area, and ecoregion. Although the North Carolina method did not consistently differentiate intermittent from perennial reaches, the indicator-based approach is a strong foundation from which to build a protocol for South Carolina. Adding measures like bankfull width and drainage area, weighting by ecoregion, or shifting thresholds may be warranted modifications for South Carolina.     

Impacts of land use conversion on bankfull discharge and mass wasting

Mass wasting and channel incision are widespread in the Nemadji River watershed of eastern Minnesota and northwestern Wisconsin. While much of this is a natural response to glacial rebound, sediment coring and tree ring data suggest that land use has also influenced these erosional processes. We characterized land use, inventoried mass wasting, surveyed stream channels and collected discharge data along segments of five streams in the Nemadji River watershed. Due to natural relief in this region, wetlands and agricultural lands are concentrated in the flatter terrain of the uplands of the Nemadji watershed, while forestland (coniferous or deciduous) is concentrated in the deeply incised (50-200% slope) stream valleys. Bankfull discharge was higher where forests had been converted from coniferous to deciduous forests and where there were fewer wetlands. Mass wasting increased exponentially with bankfull flows. While mass wasting was not correlated with forest type conversion and agricultural land use, it was negatively dependent upon wetland extent in headwater areas. Interactions between the spatial distribution of land use and terrain obfuscate any clear cause-and-effect relationships between land use, hydrology and fluvial processes.     

RIPARIAN COMMUNITIES ASSOCIATED WITH PACIFIC NORTHWEST HEADWATER STREAMS: ASSEMBLAGES,PROCESSES, AND UNIQUENESS1

Riparian areas of large streams provide important habitat to many species and control many instream processes — but is the same true for the margins of small streams? This review considers riparian areas alongside small streams in forested, mountainous areas of the Pacific Northwest and asks if there are fundamental ecological differences from larger streams and from other regions and if there are consequences for management from any differences. In the moist forests along many small streams of the Pacific Northwest, the contrast between the streamside and upslope forest is not as strong as that found in drier regions. Small streams typically lack floodplains, and the riparian area is often constrained by the hillslope. Nevertheless, riparian‐associated organisms, some unique to headwater areas, are found along small streams. Disturbance of hillslopes and stream channels and microclimatic effects of streams on the riparian area provide great heterogeneity in processes and diversity of habitats. The tight coupling of the terrestrial riparian area with the aquatic system results from the closed canopy and high edge‐to‐area ratio for small streams. Riparian areas of the temperate, conifer dominated forests of the Pacific Northwest provide a unique environment. Forest management guidelines for small streams vary widely, and there has been little evaluation of the local or downstream consequences of forest practices along small streams.     

PREDICTING BASEFLOW ALKALINITY AS AN INDEX TO EPISODIC STREAM ACIDIFICATION AND FISH PRESENCE1

ABSTRACT: Regression models to predict baseflow alkalinity from basin hydrogeology were developed and verified for headwater streams on the Laurel Hill anticline in southwestern Pennsylvania. Predicted baseflow alkalinities were then used to estimate sensitivity to acidification and presence of trout (Salvelinus fontinalis) populations for 61 headwater streams. Sensitivity classifications were verified by surveying trout populations. Geologic variables relating to the carbonate rock burial depth, extent of carbonate rock recharge areas, and length of stream channel flowing through effluent carbonate rock outcrops were much more useful in predicting baseflow alkalinity than areal extent of carbonate rocks. Baseflow alkalinity was not well related to status of trout populations on these anticlinal basins, especially on noneffluent basins where bedrock dip exceeded surface slope.     

LOW FLOW SPATIAL CHARACTERISTICS IN FORESTED HEADWATER CHANNELS OF SOUTHWEST WASHINGTON1

ABSTRACT: Patterns of dry season surface flow in forested headwater channels of southwest Washington were observed during August to September 2001 and July to October 2002. In 2001, 17 channels were sampled once, and the uppermost points of continuous flow (CF) and surface water (SW) were located. In 2002, sampling was replicated three to five times at each of 21 channels. Annual and seasonal data suggested that the location of SW varied less than CF. In most channels, SW remained at or near the channel head year around. The pattern of surface flow between CF and the channel head was used to test alternative hypotheses describing dry season recession patterns: (A) surface flow consistently retreats in a downstream direction, and (B) flow comes from fixed sources along the channel, thus surface flow retreats up‐channel towards these sources. The dominant surface flow spatial pattern in streams less than 30 percent slope was increased intermittency without a clear pattern of retreat, and thus inconsistent with either hypothesis. High gradient channels (< 30 percent slope) exhibited a combination of increased intermittency, and extensive upward retreats of surface water consistent with Hypothesis B. Differences between 2001 and 2002 suggest late summer flows in small headwater basins were controlled by spring precipitation, rather than the typically greater winter precipitation.     

What’s a Stream Without Water? Disproportionality in Headwater Regions Impacting Water Quality

Headwater streams are critical components of the stream network, yet landowner perceptions, attitudes, and property management behaviors surrounding these intermittent and ephemeral streams are not well understood. Our research uses the concept of watershed disproportionality, where coupled social-biophysical conditions bear a disproportionate responsibility for harmful water quality outcomes, to analyze the potential influence of riparian landowner perceptions and attitudes on water quality in headwater regions. We combine social science survey data, aerial imagery, and an analysis of spatial point processes to assess the relationship between riparian landowner perceptions and attitudes in relation to stream flow regularity. Stream flow regularity directly and positively shapes landowners’ water quality concerns, and also positively influences landowners’ attitudes of stream importance—a key determinant of water quality concern as identified in a path analysis. Similarly, riparian landowners who do not notice or perceive a stream on their property are likely located in headwater regions. Our findings indicate that landowners of headwater streams, which are critical areas for watershed-scale water quality, are less likely to manage for water quality than landowners with perennial streams in an obvious, natural channel. We discuss the relationships between streamflow and how landowners develop understandings of their stream, and relate this to the broader water quality implications of headwater stream mismanagement.     

Hydrologic Connectivity and the Contribution of Stream Headwaters to Ecological Integrity at Regional Scales1

Abstract: Cumulatively, headwater streams contribute to maintaining hydrologic connectivity and ecosystem integrity at regional scales. Hydrologic connectivity is the water‐mediated transport of matter, energy and organisms within or between elements of the hydrologic cycle. Headwater streams compose over two‐thirds of total stream length in a typical river drainage and directly connect the upland and riparian landscape to the rest of the stream ecosystem. Altering headwater streams, e.g., by channelization, diversion through pipes, impoundment and burial, modifies fluxes between uplands and downstream river segments and eliminates distinctive habitats. The large‐scale ecological effects of altering headwaters are amplified by land uses that alter runoff and nutrient loads to streams, and by widespread dam construction on larger rivers (which frequently leaves free‐flowing upstream portions of river systems essential to sustaining aquatic biodiversity). We discuss three examples of large‐scale consequences of cumulative headwater alteration. Downstream eutrophication and coastal hypoxia result, in part, from agricultural practices that alter headwaters and wetlands while increasing nutrient runoff. Extensive headwater alteration is also expected to lower secondary productivity of river systems by reducing stream‐system length and trophic subsidies to downstream river segments, affecting aquatic communities and terrestrial wildlife that utilize aquatic resources. Reduced viability of freshwater biota may occur with cumulative headwater alteration, including for species that occupy a range of stream sizes but for which headwater streams diversify the network of interconnected populations or enhance survival for particular life stages. Developing a more predictive understanding of ecological patterns that may emerge on regional scales as a result of headwater alterations will require studies focused on components and pathways that connect headwaters to river, coastal and terrestrial ecosystems. Linkages between headwaters and downstream ecosystems cannot be discounted when addressing large‐scale issues such as hypoxia in the Gulf of Mexico and global losses of biodiversity.