Effects of near‐future ocean acidification,fishing, and marine protection on a temperate coastal ecosystem

Understanding ecosystem responses to global and local anthropogenic impacts is paramount to predicting future ecosystem states. We used an ecosystem modeling approach to investigate the independent and cumulative effects of fishing, marine protection, and ocean acidification on a coastal ecosystem. To quantify the effects of ocean acidification at the ecosystem level, we used information from the peer‐reviewed literature on the effects of ocean acidification. Using an Ecopath with Ecosim ecosystem model for the Wellington south coast, including the Taputeranga Marine Reserve (MR), New Zealand, we predicted ecosystem responses under 4 scenarios: ocean acidification + fishing; ocean acidification + MR (no fishing); no ocean acidification + fishing; no ocean acidification + MR for the year 2050. Fishing had a larger effect on trophic group biomasses and trophic structure than ocean acidification, whereas the effects of ocean acidification were only large in the absence of fishing. Mortality by fishing had large, negative effects on trophic group biomasses. These effects were similar regardless of the presence of ocean acidification. Ocean acidification was predicted to indirectly benefit certain species in the MR scenario. This was because lobster (Jasus edwardsii) only recovered to 58% of the MR biomass in the ocean acidification + MR scenario, a situation that benefited the trophic groups lobsters prey on. Most trophic groups responded antagonistically to the interactive effects of ocean acidification and marine protection (46%; reduced response); however, many groups responded synergistically (33%; amplified response). Conservation and fisheries management strategies need to account for the reduced recovery potential of some exploited species under ocean acidification, nonadditive interactions of multiple factors, and indirect responses of species to ocean acidification caused by declines in calcareous predators.     

Decadal changes in a NW Mediterranean Sea food web in relation to fishing exploitation

We analysed changes in the ecological roles of species, trophic structure and ecosystem functioning using four standardized mass-balance models of the South Catalan Sea (North-western Mediterranean). Models represented the ecosystem during the late 1970s, mid 1990s, early 2000s, and a simulated no-fishing scenario. The underlying hypothesis was that ecosystem models should quantitatively capture the increasing exploitation in the ecosystem from the 1970s to 2000s, as well as differences between the exploited and non-exploited scenarios. Biomass showed a general decrease, while there was an increase in biomass at lower trophic levels (TL) from the 1970s to 2000s. The efficiency of energy transfer (TE) from lower to higher TLs significantly increased with time. The ecosystem during the 1990s showed higher biomass and flows than during the 1970s and 2000s due to an increase in small pelagic fish biomass (especially sardines). Exploited food webs also showed similarities in terms of general structure and functioning due to high intensity of fishing already in the 1970s. This intensity was highlighted with low trophic levels in the catch, high consumption of production by fisheries, medium to high primary production required to sustain the catches and high losses in secondary production due to fishing. Significant differences on ecosystem structure and functioning were highlighted between the exploited and no-fishing scenarios. Biomass of higher TLs increased under the no-fishing scenario and the mean trophic level of the community and the fish/invertebrate biomass ratios were substantially lower in exploited food webs. The efficiency of energy transfer (TE) from lower to higher TLs was lower under the no-fishing scenario, and it showed a continuous decrease with increasing TL. Marine mammals, large hake, anglerfish and large pelagic fish were identified as keystone species of the ecosystem when there was no fishing, while their ecological importance notably decreased under the exploited periods. On the contrary, the importance of small-sized organisms such as benthic invertebrates and small pelagic fish was higher in exploited food webs.     

A simulation model to explore the response of the Gulf of Maine food web to large-scale environmental and ecological changes

A dynamic simulation model was constructed using outputs from a balanced Gulf of Maine (GOM) energy budget model as the initial parameter set. The model was structured to provide a recipient control set of dynamics, largely based off of flows to and from different biological groups. The model was used to produce Monte Carlo simulations that were compared (percent change in biomass) with basecase simulations for a variety of scenarios. Changes in primary production, large increases in pelagic and demersal fish biomass, increases in fishing mortality, and large increases in top predators such as baleen whales and pinnepids were simulated. These scenarios roughly simulated the potential impacts of climate change, altered fishing pressure, additional protected species mitigations, and combinations thereof. Results suggest that the GOM system is primarily influenced by bottom-up processes involving phytoplankton, zooplankton, and bacterial biomass. Pelagic and demersal fish were important in determining trends in some of the scenarios. Marine mammals, large pelagic fish, and seabirds have a minor role in the GOM system in terms of biomass flows among the ecosystem components. The system is resilient to large-scale change due, in part to many predator–prey linkages. However, major alterations could occur from sustained climate change, high fishing rates, and by combinations of these types of external forcing mechanisms.     

Multispecies perspective for small-scale fisheries management: A trophic analysis of La Paz Bay in the Gulf of California,Mexico

Given the complexity of small-scale fisheries and the difficulties for applying classical assessment methods, the status of these fisheries has been poorly documented. In this study, we used a trophic mass-balance model as an analytical alternative to evaluate the trophic impacts of small-scale fisheries as a whole on the marine ecosystem and their implications for ecosystem-based management, taking as a case study the La Paz bay and adjacent fishing grounds (BALAP) located in the Gulf of California, Mexico.Maturity indices, like ascendency and primary production to respiration ratio, indicate that the BALAP ecosystem is in a developing stage. This seems to be closely related to the reported two-season climatic regime that results in a nutrient supply characterized by an oscillating upwelling. The trophic model predicts a predominance of bottom-up control in the food web, which is congruent with the immaturity of the ecosystem. In this context, fisheries seem not to cause a significant impact to the ecosystem as a whole; however, target species show signals of being fully exploited by fisheries in the system. Red snapper and sharks showed the highest exploitation rates in the ecosystem. Based on these results, we discuss the current stock concept as a population-based management unit and the necessity for defining an ecosystem-based management unit.     

Biomass‐based targets and the management of multispecies coral reef fisheries

The failure of fisheries management among multispecies coral reef fisheries is well documented and has dire implications for the 100 million people engaged in these small‐scale operations. Weak or missing management institutions, a lack of research capacity, and the complex nature of these ecosystems have heralded a call for ecosystem‐based management approaches. However, ecosystem‐based management of coral reef fisheries has proved challenging due to the multispecies nature of catches and the diversity of fish functional roles. We used data on fish communities collected from 233 individual sites in 9 western Indian Ocean countries to evaluate changes in the site's functional composition and associated life‐history characteristics along a large range of fish biomass. As biomass increased along this range, fish were larger and grew and matured more slowly while the abundance of scraping and predatory species increased. The greatest changes in functional composition occurred below relatively low standing stock biomass (<600 kg/ha); abundances of piscivores, apex predators, and scraping herbivores were low at very light levels of fishing. This suggests potential trade‐offs in ecosystem function and estimated yields for different management systems. Current fishing gear and area restrictions are not achieving conservation targets (proposed here as standing stock biomass of 1150 kg/ha) and result in losses of life history and ecological functions. Fish in reefs where destructive gears were restricted typically had very similar biomass and functions to young and low compliance closures. This indicates the potentially important role of fisheries restrictions in providing some gains in biomass and associated ecological functions when fully protected area enforcement potential is limited and likely to fail. Our results indicate that biomass alone can provide broad ecosystem‐based fisheries management targets that can be easily applied even where research capacity and information is limited. Of particular value, is our finding that current management tools may be used to reach key ecosystem‐based management targets, enabling ecosystem‐based management in many socioeconomic contexts.     

Reconstructing historical marine ecosystems using food web models: Northern British Columbia from Pre-European contact to present

Mass-balance trophic models (Ecopath with Ecosim) are developed for the marine ecosystem of northern British Columbia (BC) for the historical periods 1750, 1900, 1950 and 2000 AD. Time series data are compiled for catch, fishing mortality and biomass using fisheries statistics and literature values. Using the assembled dataset, dynamics of the 1950-based simulations are fitted to agree with observations over 50 years to 2000 through the manipulation of trophic flow parameters and the addition of climate factors: a primary production anomaly and herring recruitment anomaly. The predicted climate anomalies reflect documented environmental series, most strongly sea surface temperature and the Pacific Decadal Oscillation index. The best-fit predator–prey interaction parameters indicate mixed trophic control of the ecosystem. Trophic flow parameters from the fitted 1950 model are transferred to the other historical periods assuming stationarity in density-dependent foraging tactics. The 1900 model exhibited an improved fit to data using this approach, which suggests that the pattern of trophic control may have remained constant over much of the last century. The 1950 model is driven forward 50 years using climate and historical fishing drivers. The resulting ecosystem is compared to the 2000 model, and the dynamics of these models are compared in a predictive forecast to 2050. The models suggest similar restoration trajectories after a hypothetical release from fishing.     

Ecological role of stomatopods (mantis shrimps) and potential impacts of trawling in a marine ecosystem of the southeast coast of India

Ecosystems are balanced by nature and each component in the system has a role in the sustenance of other components. A change in one component would invariably have an effect on others. Stomatopods (mantis shrimps) are common and ecologically important predatory crustaceans in tropical marine waters. The ecological role of mantis shrimps and potential impacts of trawling in a marine ecosystem were estimated using Ecopath with Ecosim (EwE) Version 5.0 software, by constructing a mass balanced Ecopath model of Parangipettai (Porto Novo) ecosystem. Based on fisheries information from the region, 17 ecological groups were defined including stomatopods. Both primary and secondary data on biomass, P/B, Q/B and diet composition were used as basic inputs. The mass balanced model gave a total system throughput of 14,756 t km⁻² year⁻¹. The gross efficiency of 0.000942 indicated higher contribution of lower food chain groups in the fishery though the mean trophic level was 3.08. The immature and developing stage of the ecosystem was indicated by the ratio of total primary production and total respiration (1.832) and the net system production (2643.30 t km⁻² year⁻¹). Key indices (flow to detritus, net efficiency and omnivory index), split mortality rates and mixed trophic impact of different ecological groups were obtained from the model. A flow diagram was constructed to illustrate the trophic interactions, which explained the biomass flows in the ecosystem with reference to stomatopods. Two temporal simulations were made, with 10 year durations in the mass balanced Ecopath model by using ecosim routine incorporated in EwE software. The effect of decrease in biomass of stomatopods in the ecosystem was well defined, in the first run with increase in stomatopod fishing mortality, and the group showed a high positive impact on benthopelagic fish biomass increase (129%). The simulation with increase in trawling efforts resulted in the biomass decline of different ecological groups as elasmobranchs to 1%, stomatopods to 2%, crabs and lobsters to 36%, cephalopods to 63%, mackerel to 78%, and shrimps to 89%. Present study warns stomatopod discards and further increase in trawling efforts in the region and it explained the need for ecosystem based fisheries management practices for the sustainability of marine fisheries.     

Modeling an exploited rocky coastal ecosystem: Bahia Tortugas, Mexico

A trophic structure model of the rocky coastal ecosystem in Bahia Tortugas, Mexico was constructed using Ecopath software to represent the main biomass flows in the system. Data for the model came from field observations (biomass estimates, stomach contents, and ecological observations for sea snails, abalones, lobster, some demersal finfishes, and macroalgae) carried out through ten field trips from 2006 to 2008. The results provide a snapshot of how the ecosystem operates. The model considers 23 functional groups. The total system throughput was 553 t/km²/year, 57% corresponds to internal consumption, 28% to respiration, 14% becomes detritus, and only 1% is removed through commercial fishing. The model suggests that even for exploited populations, predation and competition are heavier stresses than current fishing effort; however, because spiny lobster showed the second highest keystoneness’ index value, increasing fishing pressure on this group could strongly impact the entire ecosystem. We believe that this model has the potential to support management by allowing the exploration of the potential impacts of different fishing decisions at ecosystem level.     

Ecological metrics of biomass removed by three methods of purse-seine fishing for tunas in the eastern tropical Pacific Ocean

An ecosystem approach to fisheries management is a widely recognized goal, but describing and measuring the effects of a fishery on an ecosystem is difficult. Ecological information on the entire catch (all animals removed, whether retained or discarded) of both species targeted by the fishery and nontarget species (i.e., bycatch) is required. We used data from the well-documented purse-seine fishery for tunas (Thunnus albacares, T. obesus, and Katsuwonus pelamis) in the eastern tropical Pacific Ocean to examine the fishery's ecological effects. Purse-seine fishing in the eastern tropical Pacific is conducted in 3 ways that differ in the amount and composition of target species and bycatch. The choice of method depends on whether the tunas are swimming alone (unassociated sets), associated with dolphins (dolphin sets), or associated with floating objects (floating-object sets). Among the fishing methods, we compared catch on the basis of weight, number of individuals, trophic level, replacement time, and diversity. Floating-object sets removed 2-3 times as much biomass as the other 2 methods, depending on how removal was measured. Results of previous studies suggest the ecological effects of floating-object sets are thousands of times greater than the effects of other methods, but these results were derived from only numbers of discarded animals. Management of the fishery has been driven to a substantial extent by a focus on reducing bycatch, although discards are currently 4.8% of total catch by weight, compared with global averages of 7.5% for tuna longline fishing and 30.0% for midwater trawling. An ecosystem approach to fisheries management requires that ecological effects of fishing on all animals removed by a fishery, not just bycatch or discarded catch, be measured with a variety of metrics.     

Elucidation of ecosystem attributes of an oligotrophic lake in Hokkaido,Japan, using Ecopath with Ecosim (EwE)

The fishing practices in the oligotrophic Lake Toya, Hokkaido, Japan, have profound implications in the ecosystem sustainability. The status of the sockeye salmon (Oncorhynchus nerka) population has become a serious concern among the lake managers and policy makers during the last decades. While the decline of the sockeye salmon population has been well documented in Lake Toya, there is considerable uncertainty with regards to the impact on the broader system dynamics. In this study, our objective is to address this knowledge gap by undertaking a synthesis of the Lake Toya food web using the mass-balance modeling software Ecopath with Ecosim (EwE). Our primary research question is to examine the repercussions of the declining sockeye salmon population on the trophic dynamics of the lake. Namely, we assess if there are any competing species that might have benefited from the decrease of sockeye salmon standing biomass and to what extent do these changes propagate through the Lake Toya food web? Our analysis pinpoints the critical role of the Japanese smelt (Hypomesus transpacificus nipponensis) in the system, which demonstrates a wide range of effects on several functional groups at both higher and lower trophic levels in Lake Toya. In particular, being a substantial portion of the masu salmon (Oncorhynchus masou) and adult sockeye salmon diets, the Japanese smelt has a positive impact on the top predators of the system. Amphipods, insects, and shrimp strongly benefit from the autochthonous and allochthonous organic matter in the system, while the tight coupling between phytoplankton and zooplankton seems to be particularly critical for the integrity of the Lake Toya food web. Whereas the values of the different ecosystem attributes (e.g., primary production/biomass, biomass/total throughput, system omnivory index, amount of recycled throughput, Finn's cycling index) provide evidence that Lake Toya is an immature system, we note that the internal redundancy and the system overhead estimates suggest that the lake possesses substantial reserves to overcome external perturbations. We also examined the effects of a variety of fishing policies on the biomass of masu salmon and adult sockeye salmon, which verify the belief that the adult sockeye population is quite fragile with high likelihood to collapse. Our analysis also predicts that sockeye will not rebound unless the fishing pressure exerted is substantially reduced (>50% of the reference levels used). Masu salmon seems to benefit under all the scenarios examined indicating that the intensity of the current fishing activities is significantly lower than its biomass accumulation rate in the system.     

EcoTroph: Modelling marine ecosystem functioning and impact of fishing

EcoTroph (ET) is a model articulated around the idea that the functioning of aquatic ecosystems may be viewed as a biomass flow moving from lower to higher trophic levels, due to predation and ontogenetic processes. Thus, we show that the ecosystem biomass present at a given trophic level may be estimated from two simple equations, one describing biomass flow, the other their kinetics (which quantifies the velocity of biomass transfers towards top predators). The flow kinetic of prey partly depends on the abundance of their predators, and a top-down equation expressing this is included in the model. Based on these relationships, we simulated the impact on a virtual ecosystem of various exploitation patterns. Specifically, we show that the EcoTroph approach is able to mimic the effects of increased fishing effort on ecosystem biomass expected from theory. Particularly, the model exhibits complex patterns observed in field data, notably cascading effects and ‘fishing down the food web’. EcoTroph also provides diagnostic tools for examining the relationships between catch and fishing effort at the ecosystem scale and the effects of strong top-down controls and fast-flow kinetics on ecosystems resilience. Finally, a dynamic version of the model is derived from the steady-state version, thus allowing simulations of time series of ecosystem biomass and catches. Using this dynamic model, we explore the propagation of environmental variability in the food web, and illustrated how exploitation can induce a decrease of ecosystem stability. The potential for applying EcoTroph to specific ecosystems, based on field data, and similarities between EcoTroph and Ecopath with Ecosim (EwE) are finally discussed.     

Exploring fisheries strategies for the western English Channel using an ecosystem model

An ecosystem model of the western English Channel ecosystem in 1994 was used to explore the effects of the use of a fishing policy optimization routine on profits, number of jobs and ecosystem structure. The optimization for single objective led to the specialization of the fishing fleet, with some fleet types being almost excluded. The profits and mainly the job optimizations led to big changes in the ecosystem structure, with loss of diversity, but the overall biomass of all vertebrate groups represented in the model increased considerably. For the objective focusing on ecosystem structure, there was an increase in biodiversity, with many long-lived groups predicted to increase, although the overall vertebrate biomass suffered just a small increase. An “ideal” mixed policy configuration was found when slightly greater weight was given to ecosystem structure than was given to profits and jobs. This scenario led to an overall reduction in effort but also to increased profits and biodiversity, while keeping the number of jobs at the same level as the baseline estimates. The results of the optimizations showed that the average trophic level of the catches is quite resistant to changes in the underlying system structure. On the other hand, despite the high level of aggregation of the model structure, a biodiversity index estimated by the model presented large changes as a function of the weights placed on the single policy functions, reflecting the changes in the system structure. The output of the application of the fishing optimization presented here should be considered in qualitative rather than in quantitative terms as an aid and part contribution to the complicated discussions on future long term management actions. Nonetheless it points to an overall reduction in fishing capacity, an objective widely accepted within the scientific community, while keeping the fishery in a profitable state.     

Collapse and reorganization of a food web of Mwanza Gulf, Lake Victoria

Lake Victoria in East Africa is the world's second largest freshwater system. Over the past century the ecosystem has undergone drastic changes. Some 30 years after the introduction of Nile perch (Lates niloticus) and Nile tilapia (Oreochromis niloticus) in the 1950s, the highly diverse community of native haplochromines collapsed, leaving a system dominated by only four species: the native cyprinid dagaa (Rastrineobola argentea) and shrimp (Caridina nilotica), as well as the introduced Nile perch and Nile tilapia. More recently, an unexpected resurgence of haplochromines has been reported. To understand these changes in terms of ecosystem functioning and of changes in growth of trophic groups, we created mass balances of the food web near Mwanza, Tanzania, before, during, and after the Nile perch boom (1977, 1987, and 2005), using the application ECOPATH. We connected these mass balances with a dynamic model assuming linear trends in net growth rates of the trophic groups. Our analysis suggests that the Nile perch boom initially altered the biomass distribution over trophic levels. Also, results indicate that not only fishing but also changes at the detritivores' trophic level might have played an important role in driving changes in the system. Both the mass balances and the dynamic model connecting them reveal that, after a major distortion during the Nile perch boom, the biomass distribution over the main trophic levels had largely recovered its original (1977) state by 2005. However, no such return appeared in terms of community structure. Biodiversity in the new state is dramatically lower, consisting of introduced species and a few native surviving species. We conclude that at an aggregate level Lake Victoria's ecosystem has proved to be resilient in the sense that its overall trophic structure has apparently recovered after a major perturbation. By contrast, its intricate functional structure and associated biodiversity have proved to be fragile and seem unlikely to recover.     

Unintended Cultivation,Shifting Baselines,and Conflict between Objectives for Fisheries and Conservation

The effects of fisheries on marine ecosystems, and their capacity to drive shifts in ecosystem states, have been widely documented. Less well appreciated is that some commercially valuable species respond positively to fishing‐induced ecosystem change and can become important fisheries resources in modified ecosystems. Thus, the ecological effects of one fishery can unintentionally increase the abundance and productivity of other fished species (i.e., cultivate). We reviewed examples of this effect in the peer‐reviewed literature. We found 2 underlying ecosystem drivers of the effect: trophic release of prey species when predators are overfished and habitat change. Key ecological, social, and economic conditions required for one fishery to unintentionally cultivate another include strong top–down control of prey by predators, the value of the new fishery, and the capacity of fishers to adapt to a new fishery. These unintended cultivation effects imply strong trade‐offs between short‐term fishery success and conservation efforts to restore ecosystems toward baseline conditions because goals for fisheries and conservation may be incompatible. Conflicts are likely to be exacerbated if fisheries baselines shift relative to conservation baselines and there is investment in the new fishery. However, in the long‐term, restoration toward ecosystem baselines may often benefit both fishery and conservation goals. Unintended cultivation can be identified and predicted using a combination of time‐series data, dietary studies, models of food webs, and socioeconomic data. Identifying unintended cultivation is necessary for management to set compatible goals for fisheries and conservation. Cultivo Accidental, Líneas de Base Cambiantes y el Conflicto entre los Objetivos para las Pesquerías y la Conservación     

Modeling changes in the coastal ecosystem of the Pearl River Estuary from 1981 to 1998

The coastal ecosystem of the Pearl River Estuary (PRE) has been overfished and received a high level of combined pollution since the 1980s. Ecopath with Ecosim was used to construct two ecosystem models (for 1981 and 1998) to characterize the food web structure and functioning of the ecosystem. Pedigree work and simple sensitivity analysis were carried out to evaluate the quality of data and the uncertainty of the models. The two models seem reliable with regards to input data of good quality. Comparing the variations of outputs of these two models aimed to facilitate assessment of changes of the ecosystem during the past two decades.The trophic structure of the ecosystem has changed with an increase in the biomass proportion of lower trophic level (TL) organisms and a decrease in top predator biomass proportion. All the indices of ecosystem maturity examined show that the system was in a more mature condition in 1981 than in 1998, although the system has been in a condition of stress due to anthropogenic disturbances, such as environmental pollution and habitat destruction since 1981. The ecosystem was aggregated into six and seven integral TLs in 1981 and 1998, respectively, using the trophic aggregation routine of Ecopath. Most of the total system biomass and catch took place at TL II and III in both years. But the distribution of the total system biomass and catch at different TLs changed with decreasing proportions in higher TLs in 1998. The mean transfer efficiency was 9.1% and 10.2% in 1981 and 1998, respectively.Comparative network analysis allowed quantification of the importance of direct and indirect trophic interactions among functional groups. Moreover, a method derived from the mixed trophic impact (MTI) analysis allowed estimating importance of groups in terms of “keystoneness” and identifying the keystone species in the two models over the past two decades. The results indicate that there were no clear keystone species in 1998 but two keystone species at medium trophic levels were identified in 1981. Moreover, organisms located at low trophic levels such as phytoplankton, zooplankton and benthic invertebrates were identified to have relatively high keystoneness in the ecosystem.     

Lake of flies, or lake of fish? A trophic model of Lake Malawi

Ecosystem-focused models have, for the first time, become available for the combined demersal and pelagic components of a large tropical lake ecosystem, Lake Malawi. These provide the opportunity to explore continuing controversies over the production efficiencies and ecological functioning of large tropical lakes. In Lake Malawi these models can provide important insight to the effect of fishing on fish composition, and the potential competition that the lakefly Chaoborus edulis may have with fisheries production. A mass-balanced trophic model developed for the demersal fish community of the southern and western areas of Lake Malawi was integrated with an existing trophic model developed for the open-water pelagic. Input parameters for the demersal model were obtained from a survey of fish distributions, fish food consumption studies, and from additional published quantitative and qualitative information on the various biotic components of the community. The model was constructed using the Ecopath approach and software. The graphically presented demersal food web spanned four trophic levels and was based primarily on consumption of detritus, zooplankton and sedimented diatoms. Zooplankton was imported into the system at trophic levels three and four through fish predation on carnivorous and herbivorous copepods and Chaoborus larvae. It is proposed that the primary consumption of copepods was by fish migrating into the pelagic zone. Chaoborus larvae in the demersal were probably consumed near the lakebed as they conducted a daily migration from the pelagic to seek refuge in the sediments. This evidence for strong benthic-pelagic coupling provided the opportunity for linking the demersal model to the existing model for the pelagic community so producing the first model for the complete ecosystem. Energy fluxes through the resulting combined model demonstrated that the primary import of biomass to the demersal system was detritus of pelagic origin (72.1%) and pelagic zooplankton (10.6%). Only 15.8% of the biomass consumed within the demersal system was of demersal origin. Lakefly production is efficiently utilised by the lake fish community, and any attempt to improve fishery production through introduction of a non-native plantivorous fish species would have a negative impact on the stability and productivity of the lake ecosystem.     

Long-term trends in the trophic structure of the North Sea fish community: evidence from stable-isotope analysis, size-spectra and community metrics

Fishing has wide-ranging impacts on marine ecosystems. One of the most pervasive signs of intensive fishing is "fishing down the food web", with landings increasingly dominated by smaller species from lower trophic levels. Decreases in the trophic level of landings are assumed to reflect those in fish communities, because size-selective mortality causes decreases in the relative abundance of larger species and in mean body size within species. However, existing analyses of fishing impacts on the trophic level of fish communities have focused on the role of changes in species composition rather than size composition. This will provide a biased assessment of the magnitude of fishing impacts, because fishes feed at different trophic levels as they grow. Here, we combine body size versus trophic level relationships for North Sea fishes (trophic level assessed using nitrogen stable-isotope analysis) with species-size-abundance data from two time-series of trawl-survey data (whole North Sea 1982-2000, central and northern North Sea 1925-1996) to predict long-term trends in the trophic structure of the North Sea fish community. Analyses of the 1982-2000 time-series showed that there was a slow but progressive decline in the trophic level of the demersal community, while there was no trend in the trophic level of the combined pelagic and demersal community. Analyses of the longer time-series suggested that there was no trend in the trophic level of the demersal community. We related temporal changes in trophic level to temporal changes in the slopes of normalised biomass size-spectra (which theoretically represent the trophic structure of the community), mean log₂ body mass and mean log₂ maximum body mass. While the size-based metrics of community structure showed long-term trends that were consistent with the effects of increased fishery exploitation, these trends were only correlated with trophic level for the demersal community. Our analysis suggests that the effects of fishing on the trophic structure of fish communities can be much more complex than previously assumed. This is a consequence of sampled communities not reflecting all the pathways of energy transfer in a marine ecosystem and of the absence of historical data on temporal and spatial changes in the trophic level of individuals. For the North Sea fish community, changes in size structure due to the differential effects of fishing on species and populations with different life histories are a stronger and more universal indicator of fishing effects than changes in mean trophic level.     

How might we model an ecosystem?

Predicting ecosystem effects is of crucial importance in a world at threat from natural and human-mediated change. Here we propose an ecologically defensible representation of an ecosystem that facilitates predictive modelling. The representation has its roots in the early trophic and energetic theory of ecosystem dynamics and more recent functional ecology and network theory. Using the arable ecosystem of the UK as an example, we show that the representation allows simplification from the many interacting plant and invertebrate species, typically present in arable fields, to a more tractable number of trophic-functional types. Our compound hypothesis is that “trophic-functional types of plants and invertebrates can be used to explain the structure, diversity and dynamics of arable ecosystems”. The trophic-functional types act as containers for individuals, within an individual-based model, sharing similar trophic behaviour and traits of biomass transformation. Biomass, or energy, flows between the types and this allows the key ecological properties of individual abundance and body mass, at each trophic height, to be followed through simulations. Our preliminary simulation results suggest that the model shows great promise. The simulation output for simple ecosystems, populated with realistic parameter values, is consistent with current laboratory observations and provides exciting indications that it could reproduce field scale phenomena. The model also produces output that links the individual, population and community scales, and may be analysed and tested using community, network (food web) and population dynamic theory. We show that we can include management effects, as perturbations to parameter values, for modelling the effects of change and indicating management responses to change. This model will require robust analysis, testing and validation, and we discuss how we will achieve this in the future.     

Bayesian Decision‐Network Modeling of Multiple Stakeholders for Reef Ecosystem Restoration in the Coral Triangle

Proposals for marine conservation measures have proliferated in the last 2 decades due to increased reports of fishery declines and interest in conservation. Fishers and fisheries managers have often disagreed strongly when discussing controls on fisheries. In such situations, ecosystem‐based models and fisheries‐stock assessment models can help resolve disagreements by highlighting the trade‐offs that would be made under alternative management scenarios. We extended the analytical framework for modeling such trade‐offs by including additional stakeholders whose livelihoods and the value they place on conservation depend on the condition of the marine ecosystem. To do so, we used Bayesian decision‐network models (BDNs) in a case study of an Indonesian coral reef fishery. Our model included interests of the fishers and fishery managers; individuals in the tourism industry; conservation interests of the state, nongovernmental organizations, and the local public; and uncertainties in ecosystem status, projections of fisheries revenues, tourism growth, and levels of interest in conservation. We calculated the total utility (i.e., value) of a range of restoration scenarios. Restricting net fisheries and live‐fish fisheries appeared to be the best compromise solutions under several combinations of settings of modeled variables. Results of our case study highlight the implications of alternate formulations for coral reef stakeholder utility functions and discount rates for the calculation of the net benefits of alternative fisheries management options. This case study may also serve as a useful example for other decision analyses with multiple stakeholders. Modelo de Red de Decisión Bayesiana de Múltiples Actores Interesados en la Restauración de Ecosistemas de Arrecife en el Triángulo de Coral     

Key Features and Context‐Dependence of Fishery‐Induced Trophic Cascades

Abstract: Trophic cascades triggered by fishing have profound implications for marine ecosystems and the socioeconomic systems that depend on them. With the number of reported cases quickly growing, key features and commonalities have emerged. Fishery‐induced trophic cascades often display differential response times and nonlinear trajectories among trophic levels and can be accompanied by shifts in alternative states. Furthermore, their magnitude appears to be context dependent, varying as a function of species diversity, regional oceanography, local physical disturbance, habitat complexity, and the nature of the fishery itself. To conserve and manage exploited marine ecosystems, there is a pressing need for an improved understanding of the conditions that promote or inhibit the cascading consequences of fishing. Future research should investigate how the trophic effects of fishing interact with other human disturbances, identify strongly interacting species and ecosystem features that confer resilience to exploitation, determine ranges of predator depletion that elicit trophic cascades, pinpoint antecedents that signal ecosystem state shifts, and quantify variation in trophic rates across oceanographic conditions. This information will advance predictive models designed to forecast the trophic effects of fishing and will allow managers to better anticipate and avoid fishery‐induced trophic cascades.