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1.
Abstract: Swayne's hartebeest ( Alcelaphus buselaphus swaynei ) is an endangered antelope that survives in four or five relict populations in Ethiopia. We examined the two main populations (Senkele and Nechisar) for mitochondrial (D-loop) and nuclear (microsatellite) variability in order to measure levels of genetic variation within the subspecies and degree of differentiation between populations. For comparison, we examined samples from a large population of red hartebeest ( Alcelaphus buselaphus caama ). Both swaynei and caama exhibited high levels of variation. There was significant differentiation between the populations of swaynei at Senkele and Nechisar, and gene diversity in Nechisar, the smaller of the two populations, was significantly lower than that in Senkele. Many mitochondrial haplotypes and microsatellite alleles present at high frequencies among the Senkele individuals were missing in Nechisar, suggesting that the translocation of animals from Senkele undertaken in 1974 did not contribute notably to the gene pool in Nechisar. Subsamples taken from Senkele in 1988 and 1995 showed a significant change in allele frequencies, a change that probably can be attributed to a massive population decline during this period. We recommend that both populations be protected in situ to maintain as much as possible of the diversity that exists within the taxon and that a breeding program be established. In spite of the earlier unsuccessful attempt, we argue that translocation of animals for enhancement of population size as well as genetic variation in Nechisar should be considered.  相似文献   

2.
Patterns of Genetic Diversity and Its Loss in Mammalian Populations   总被引:3,自引:0,他引:3  
Abstract:  Policy aimed at conserving biodiversity has focused on species diversity. Loss of genetic diversity, however, can affect population persistence, evolutionary potential, and individual fitness. Although mammals are a well-studied taxonomic group, a comprehensive assessment of mammalian genetic diversity based on modern molecular markers is lacking. We examined published microsatellite data from populations of 108 mammalian species to evaluate background patterns of genetic variability across taxa and body masses. We tested for loss of genetic diversity at the population level by asking whether populations that experienced demographic threats exhibited lower levels of genetic diversity. We also evaluated the effect of ascertainment bias (a reduction in variability when microsatellite primers are transferred across species) on our assessment of genetic diversity. Heterozygosity did not vary with body mass across species ranging in size from shrews to whales. Differences across taxonomic groupings were noted at the highest level, between populations of marsupial and placental mammals. We documented consistently lower heterozygosity, however, in populations that had experienced demographic threats across a wide range of mammalian species. We also documented a significant ( p = 0.01) reduction in heterozygosity as a result of ascertainment bias. Our results suggest that populations of both rare and common mammals are currently losing genetic diversity and that conservation efforts focused above the population level may fail to protect the breadth of persisting genetic diversity. Conservation policy makers may need to focus their efforts below the species level to stem further losses of genetic resources.  相似文献   

3.
Abstract:  Captive-bred animals derived from native, alien, or hybrid stocks are often released in large numbers in natural settings with the intention of augmenting harvests. In brown trout ( Salmo trutta ), stocking with hatchery-reared non-native fish has been the main management strategy used to maintain or improve depleted wild brown trout populations in Iberian and other Mediterranean regions. This measure has become a serious threat to the conservation of native genetic diversity, mainly due to introgressive hybridization. Aware of this risk, the agency responsible for management of brown trout in the eastern Pyrenees (Spain) created "brown trout genetic refuges" to preserve the integrity of brown trout gene pools in this region. Within refuge areas, the prerefuge status with respect to fishing activities has been maintained, but hatchery releases have been banned completely. We evaluated this management strategy through a comparison of the stocking impact on native populations that accounted for stocking histories before and after refuge designations and fishing activities. In particular we examined the relevant scientific, cultural, and political challenges encountered. Despite agency willingness to change fishery policies to balance exploitation and conservation, acceptance of these new policies by anglers and genetic monitoring of refuge populations should also be considered. To improve management supported by genetic refuges, we suggest focusing on areas where the public is more receptive, considering the situation of local native diversity, and monitoring of adjacent introgressed populations. We recommend the use of directional supportive breeding only when a population really needs to be enhanced. In any case, management strategies should be developed to allow for protection within the context of human use.  相似文献   

4.
Genetic variation was examined in Helonias bullata , a threatened perennial plant species that occurs in isolated wetland habitats. Fifteen populations representing the species' geographic range were sampled. Genetic diversity was low for the species ( H es = 0.053) as well as within populations ( H ep = 0.029). Of the 33 allozyme loci examined, 11 (33%) were polymorphic, while on average only 12.8% (4) of the loci were polymorphic within populations. The number of alleles per polymorphic locus was 2.36 for the species and averaged 2.09 across populations. For every genetic parameter calculated, variation in H. bullata was lower than that typically found for narrowly distributed plant species. The lowest levels of genetic diversity were found in northern areas that were colonized following the last glacial epoch. The number of genotypes detected per population ranged from three to 21, with a mean of 13 for this clonally reproducing species. We found a relatively high proportion of total genetic diversity (30.6%) among populations and a significant correlation (p < 0.002) between genetic distance and geographic distance. Genetic drift phenomena appear to play a major role in the population genetics of this species. Anomalously, several populations that appeared most limited in size and vigor were genetically most variable, perhaps because they represent older, relictual populations. Life-history characteristics of H. bullata coupled with low levels of genetic diversity and the degradation and disappearance of wetlands threaten the existence of this species.  相似文献   

5.
Genetic differentiation and genetic variability of sporophytic and gametophytic populations of Gelidium arbuscula (Bory) from three localities sampled in 1989 and 1990 in the Canary Islands (Spain) were examined by isozyme electrophoresis. Twenty-three to 29 putative alleles corresponding to 22 gene loci, were compared. High deviations in Hardy-Weinberg equilibrium, and significant differences between allelic frequencies of sporophytic and gametophytic subpopulations at the same locality were found, suggesting a predominant asexual reproduction of G. arbuscula. The genetic variability (percentage of polymorphic loci, mean number of alleles per locus and average gene diversity) of haploid subpopulations was lower than that of diploid subpopulations at all three localities, being the lowest described for seaweeds. No correlation between genetic and geographical distance was found. The high genetic differentiation coefficient between all subpopulations suggests a very reduced genetic flow between subpopulations of the same and of different localities. These results suggest that the genetic structure of the populations of G. arbuscula from the Canary Islands is due to a founder-effect combined with a predominance of asexual reproduction. This is the first report comparing allelic frequencies between sporophytic and gametophytic subpopulations of seaweeds.  相似文献   

6.
Abstract: The number of individuals translocated and released as part of a reintroduction is often small, as is the final established population, because the reintroduction site is typically small. Small founder and small resulting populations can result in population bottlenecks, which are associated with increased rates of inbreeding and loss of genetic diversity, both of which can affect the long‐term viability of reintroduced populations. I used information derived from pedigrees of four monogamous bird species reintroduced onto two different islands (220 and 259 ha) in New Zealand to compare the pattern of inbreeding and loss of genetic diversity among the reintroduced populations. Although reintroduced populations founded with few individuals had higher levels of inbreeding, as predicted, other factors, including biased sex ratio and skewed breeding success, contributed to high levels of inbreeding and loss of genetic diversity. Of the 10–58 individuals released, 4–25 genetic founders contributed at least one living descendent and yielded approximately 3–11 founder–genome equivalents (number of genetic founders assuming an equal contribution of offspring and no random loss of alleles across generations) after seven breeding seasons. This range is much lower than the 20 founder–genome equivalents recommended for captive‐bred populations. Although the level of inbreeding in one reintroduced population initially reached three times that of a closely related species, the long‐term estimated rate of inbreeding of this one population was approximately one‐third that of the other species due to differences in carrying capacities of the respective reintroduction sites. The increasing number of reintroductions to suitable areas that are smaller than those I examined here suggests that it might be useful to develop long‐term strategies and guidelines for reintroduction programs, which would minimize inbreeding and maintain genetic diversity.  相似文献   

7.
Monitoring temporal changes in genetic variation has been suggested as a means of determining if a population has experienced a demographic bottleneck. Simulations have shown that the variance in allele frequencies over time ( F ) can provide reasonable estimates of effective population size ( Ne ). This relationship between F and Ne suggests that changes in allele frequencies may provide a way to determine the severity of recent demographic bottlenecks experienced by a population. We examined allozyme variation in experimental populations of the eastern mosquitofish ( Gambusia holbrooki ) to evaluate the relationship between the severity of demographic bottlenecks and temporal variation in allele frequencies. Estimates of F from both the fish populations and computer simulations were compared to expected rates of drift. We found that different methods for estimating F had little effect on the analysis. The variance in estimates of F was large among both experimental and simulated populations experiencing similar demographic bottlenecks. Temporal changes in allele frequencies suggested that the experimental populations had experienced bottlenecks, but there was no relationship between observed and expected values of F . Furthermore, genetic drift was likely to be underestimated in populations experiencing the most severe bottlenecks. The weak relationship between F and bottleneck severity is probably due to both sampling error associated with the number of polymorphic loci examined and the loss of alleles during the bottlenecks. For populations that may have experienced severe bottlenecks, caution should be used in making evolutionary interpretations or management recommendations based on temporal changes in allele frequencies.  相似文献   

8.
Abstract:  Populations at the periphery of a species' range are of interest to conservation biologists because they can show marked genetic differentiation from populations at the center of a range and because of potential hybridization among rare and common species. We examined two closely related Cyclamen species. One is a narrow endemic, and the other is more geographically widespread (both protected by law in continental southern France). We used floral traits and genetic variability to test for hybridization among the species in peripheral populations of the rare species. The species co-occurred on Corsica in a disjunct, peripheral part of the distribution of the endemic species and in an ecologically marginal area for the widespread species. The two species have hybridized and the endemic species showed high levels of introgression with its widespread congener. Genetic and floral variability in sites with both species was markedly higher than in sites with a single species. Our results highlight the need for a conservation strategy that integrates hybrid populations because they represent a source of novel diversity that may have adaptive potential.  相似文献   

9.
Abstract:  The Mesa Central of Mexico is of special conservation interest due to its high richness of freshwater fish species, of which the goodeines are one of the most representative groups. Through an integrated approach, we determined conservation priorities for goodeine populations. We based our recommendations on the genetic diversity (variation in five microsatellite DNA loci) in 10 populations of Zoogoneticus quitzeoensis and on an analysis of ecological (e.g., presence of exotic species), social (e.g., political situation), and environmental (e.g., pollution) information for 52 historical occurrence points for species in the genus Zoogoneticus . Patterns of genetic erosion and genetic diversity indices were closely associated with human impact. Recent bottleneck events were most evident in the populations from remnants of the lakes drained at the beginning of the twentieth century. We identified seven operational conservation units (OCUs), all of which should be conserved because they contain unique portions of the total variation of the species. Special attention needs to be given to increase genetic variability, recover population sizes, and reestablish contact among populations within OCUs. It is imperative to create an integrative and effective approach for the recovery and conservation of the freshwater fish diversity of Central Mexico that is based on social and natural sciences.  相似文献   

10.
Aguirre JD  Marshall DJ 《Ecology》2012,93(5):1134-1142
Reductions in genetic diversity can have widespread ecological consequences: populations with higher genetic diversity are more stable, productive and resistant to disturbance or disease than populations with lower genetic diversity. These ecological effects of genetic diversity differ from the more familiar evolutionary consequences of depleting genetic diversity, because ecological effects manifest within a single generation. If common, genetic diversity effects have the potential to change the way we view and manage populations, but our understanding of these effects is far from complete, and the role of genetic diversity in sexually reproducing animals remains unclear. Here, we examined the effects of genetic diversity in a sexually reproducing marine invertebrate in the field. We manipulated the genetic diversity of experimental populations and then measured individual survival, growth, and fecundity, as well as the size of offspring produced by individuals in high and low genetic diversity populations. Overall, we found greater genetic diversity increased performance across all metrics, and that complementarity effects drove the increased productivity of our high-diversity populations. Our results show that differences in genetic diversity among populations can have pervasive effects on population productivity within remarkably short periods of time.  相似文献   

11.
The genetic population structure of the recently introduced Asian clam, Potamocorbula amurensis, in San Francisco Bay was described using starch gel electrophoresis at eight presumptive loci. Specimens were taken from five environmentally distinct sites located throughout the bay. The population maintains a high degree of genetic variation, with a mean heterozygosity of 0.295, a mean polymorphism of 0.75, and an average of 3.70 alleles per locus. The population is genetically homogeneous, as evidenced from genetic distance values and F-statistics. However, heterogeneity of populations was indicated from a contingency chi-square test. Significant deviations from Hardy-Weinberg equilibrium and heterozygote deficiencies were found at the Lap-1 locus for all populations and at the Lap-2 locus for a single population. High levels of variability could represent a universal characteristic of invading species, the levels of variability in the source population(s), and/or the dynamics of the introduction. Lack of differentiation between subpopulations may be due to the immaturity of the San Francisco Bay population, the general purpose phenotype genetic strategy of the species, high rates of gene flow in the population, and/or the selective neutrality of the loci investigated.  相似文献   

12.
This paper reviews the history and evolution of the United States National Wildlife Refuge System, perhaps the largest and oldest wildlife conservation system in the world. The refuge system is guided by the doctrine of compatibility, which permits only those uses on a refuge which are "compatible with the purposes for which the refuge was established." Memoranda and documents spanning the last 100 years were examined, and key refuge personnel interviewed, to understand the historical basis for current refuge policies. Topics of particular importance were the origins of the compatibility doctrine, the origin and meaning of the sanctuary concept, and the means by which refuges were established.
Through time, the refuge system has shifted from a policy of strict protection of wildlife to a policy of integrating public uses of refuges. The doctrine of compatibility has evolved to facilitate public use of wildlife refuges. Increasingly, the needs for recreation and resource use have interfered with the purposes far which refuges were established. A legislative solution may be needed to ensure that these areas are protected and remain viable reserves for wildlife and natural communities.
The sustained conservation of reserve areas often represents a delicate balance between political constraints and biological realities. The examination of the National Wildlife Refuge System not only has ramifications for North American conservation, but illustrates many of the problems and pitfalls facing conservation and land management worldwide.  相似文献   

13.
It is thought that genetic variation can affect the persistence of a population through its influence on disease susceptibility. We assessed genome-wide genetic variation, variation at a locus involved in the immune system, and acceptance or rejection of skin grafts in three natural populations of the pocket gopher ( Thomomys bottae ). Multilocus DNA fingerprints confirmed previous allozyme data, revealing high levels of variation among Hastings Reserve pocket gophers and almost complete within-population identity for individuals from the two Patricks Point populations (Patricks J and Patricks F), although Patricks J animals were dissimilar to animals from Patricks F despite their proximity. Individuals from the high-variation population consistently rejected within-population reciprocal skin grafts, whereas Patricks J and Patricks F individuals accepted within-population grafts. Patricks J and Patricks F individuals were found to be immunocompetent, however, as revealed by the ability of all individuals to reject between-population grafts, including those that previously accepted within-population grafts. A DNA heteroduplex analysis was then used to directly characterize variability at DQα, a locus of the immune system's major histocompatability complex. Both populations low in genetic variation were fixed for unique DQα alleles, whereas observed heterozygosity in the Hastings population was 0.43, ascribable to at least three unique alleles. These data are in accord with previous cheetah skin-graft results and confirm that skin grafts can be used to assess genetic similarity. We suggest that although many animal populations can persist with extremely low levels of genetic variation in the wild, such populations may be at a greater risk of extinction from particular pathogens because of their genetic uniformity.  相似文献   

14.
Reviews that summarize the genetic diversity of plant species in relation to their life history and ecological traits show that forest trees have more genetic diversity at population and species levels than annuals or herbaceous perennials. In addition, among-population genetic differentiation is significantly lower in trees than in most herbaceous perennials and annuals. Possible reasons for these differences between trees and herbaceous perennials and annuals have not been discussed critically. Several traits, such as high rates of outcrossing, long-distance pollen and seed dispersal, large effective population sizes (Ne), arborescent stature, low population density, longevity, overlapping generations, and occurrence in late successional communities, may make trees less sensitive to genetic bottlenecks and more resistant to habitat fragmentation or climate change. We recommend that guidelines for genetic conservation strategies be designed differently for tree species versus other types of plant species. Because most tree species fit an LH scenario (low [L] genetic differentiation and high [H] genetic diversity), tree seeds could be sourced from a few populations distributed across the species’ range. For the in situ conservation of trees, translocation is a viable option to increase Ne. In contrast, rare herbaceous understory species are frequently HL (high differentiation and low diversity) species. Under the HL scenario, seeds should be taken from many populations with high genetic diversity. In situ conservation efforts for herbaceous plants should focus on protecting habitats because the typically small populations of these species are vulnerable to the loss of genetic diversity. The robust allozyme genetic diversity databases could be used to develop conservation strategies for species lacking genetic information. As a case study of reforestation with several tree species in denuded areas on the Korean Peninsula, we recommend the selection of local genotypes as suitable sources to prevent adverse effects and to insure the successful restoration in the long term.  相似文献   

15.
Acanthochromis Gill is a monotypic genus within the damselfish family Pomacentridae, erected for an unusual species [A. polyacanthus (Bleeker)] that uniquely lacks larval dispersal. Instead, offspring are reared in the parental territory, in the manner of cichlids, and fledged into the surrounding habitat. Phenotypic and genotypic variation was surveyed on the basis of body colouration and 7 polymorphic loci in 19 populations from 5 regions of the central and southern Great Barrier Reef (GBR). Variation in both characters was found at regional and local scales. Two colour morphs were recognised: a bicoloured morph from the three northern regions and a uniform dark morph from the two southern regions. Isozyme analysis showed a similar pattern with greatest variation between the different morphs, but also with significant variation at both regional and local scales within morphotypes. Heterozygosity was maximal in the central populations, which, together with other measures of variability, suggests a mixing of separate gene pools in this region and denies species status to the two morphotypes despite numerous fixed differences in allele frequencies between the most distant populations. The presence of fixed differences in multiple alleles between populations separated by 1000 km indicates negligible gene flow over such distances and long isolation of these gene pools. These patterns may reflect recolonisation of the GBR after the last sea-level rise by fish from two stocks. Founder effects and random drift in small populations after colonisation are probably the major sources of the local and regional variations observed at smaller spatial scales. This diversity has been maintained among populations at all scales by the very low levels of gene flow possible without an effective strategy for larval dispersal between coral reefs.  相似文献   

16.
Translocation, the intentional release of captive-propagated and/or wild-caught animals into the wild in an attempt to establish, reestablish, or augment a population, is a commonly used approach to species conservation. Despite the frequent mention of translocation as an aid in threatened or endangered species recovery plans, translocations have resulted in the establishment of few sustainable populations. To improve the effectiveness of translocation efforts, it is essential to identify and adopt features that contribute to successful translocations. This study analyzed 148 translocations of the endangered Gila topminnow (Poeciliopsis occidentalis) to identify various factors that have significantly influenced translocation success. We quantified success as the "persistence time" of translocated populations and used survival analysis to interpret the role of several factors. The following factors affected persistence times of translocated populations: season in which the fish were translocated, habitat type of the translocation site, and genetic origin of the fish stocked. In general, factors associated with stocking, the population stocked, and the site of translocation can significantly affect the persistence of translocated populations and thus increase the probability of translocation success. For Gila topminnow, future translocations should be undertaken in late summer or fall (not early summer), should occur into ponds (not streams, wells, or tanks), and should generally utilize individuals from genetic lineages other than Monkey Spring. For other species, a key lesson emerging from this work is that life history attributes for each translocated species need to be considered carefully.  相似文献   

17.
Preservation of genetic diversity within declining populations of endangered species is a major concern in the discipline of conservation biology. The endangered cheetah, Acinonyx jubatus , exhibits relatively little genetic variability (polymorphism = 0.02–0.04, heterozygosity = 0.0004–0.014). Since the discovery of the cheetah's relative homozygosity, this species has been frequently cited as an example of one whose survival may be compromised by the loss of genetic diversity. The cheetah's genetic uniformity is generally believed to be the result of an historical population bottle-neck followed by a high level of inbreeding. Evidence offered in support of this hypothesis includes the cheetah's present low level of genetic variability and symptoms of inbreeding depression in captive populations. Using available data on fluctuating asymmetry and genetic variation in other carnivores, I question the assumption that the present level of genetic diversity in the cheetah is indicative of a loss of former variability. Carnivores exhibit significantly lower levels of genetic variation than other mammals, and several carnivores for which data are available exhibit lower levels of heterozygosity and polymorphism than the cheetah does. Measures of fluctuating asymmetry do not support the hypothesis that the cheetah is suffering an increased level of bomozygosity due to genetic stress. Many of the phenotypic effects attributed to inbreeding depression, such as infertility, reduced litter sizes, and increased susceptibility to disease, are limited to captive individuals and may be explained as physiological or behavioral artifacts of captivity. In sum, the genetic constitution of the cheetah does not appear to compromise the survival of the species. Conservation efforts may be more effectively aimed at a real, immediate threat to the cheetah's future: the loss of its natural habitat.  相似文献   

18.
The razorback sucker ( Xyrauchen texanus ) is a large, long-lived catostomid fish endemic to the Colorado River drainage of western North America, endangered because of recruitment failure. Efforts to preserve the species have emphasized artificial propagation and reintroduction. Given the importance of maintaining genetic diversity in such a program, we examined mitochondrial DNA diversity in a source population (Lake Mohave, Arizona-Nevada) and three hatchery-produced year classes (1987, 1989, 1990). The source contained considerable variation, indicated by high haplotype diversity ( ĥ = 0.97) and a large number of unique haplotypes (17 in 25 individuals). Diversity also was high in the 1987 ( ĥ = 0.89, 6 haplotypes in 10 individuals) and 1989 hatchery-produced year classes ( ĥ = 0.91, 7 in 11), but significantly lower in the 1990 year class ( ĥ = 0.71, 4 in 10). Low diversity in the last class was likely because of differences among females in fecundity, viability of progeny, or both. Because natural populations have collapsed throughout the species' range, we must identify methods that preserve the most diversity. We examined three potential alternatives: standard hatchery propagation, natural spawning in predator-free environments, and protective custody of larvae collected from the lake with reintroduction after growth to a size likely to survive. The last is the preferred alternative and should be pursued as the most cost-effective option for preserving genetic diversity in the razorback sucker.  相似文献   

19.
Five populations of the bathyal trochid gastropod Bathybembix bairdii (Dall) taken from depths of 579 to 1156 m in the Southern California Continental Borderland were surveyed for levels of genetic variability at 18 presumptive gene loci, using techniques of starch gel electrophoresis. All the populations were highly similar genetically; none of the populations possessed unique alleles. Four of 5 polymorphic loci scored in all the populations displayed statistically significant heterogeneity of allelic frequencies among stations. Only the diallelic fumarase (FUM) locus displayed a trend with depth. The geographic and depth patterns of the genetic variability in these populations do not support the hypothesis that the high levels of genetic variability observed in bathyal populations are an artifact of gene flow between populations differentiated with depth. The 16.2% of the loci heterozygous per individual of B. bairdii is of the same order as the average heterozygosities reported for other deep-sea invertebrate taxa. These reports of high genetic variability in a physically constant and seasonless environment are reviewed and discussed in the context of the trophic-stability hypothesis of Ayala and Valentine and the time, size and divergence hypothesis of Soulé. Evidence is presented that despite the observed correlation of average heterozygosities in benthic marine invertebrates with seasonality of the trophic regime, this is not apparent for an enzyme system (leucine amino peptidase) which might be expected to display this trend if it reflected a genetic strategy to cope with trophic seasonality. The time, size and divergence hypothesis, focusing on population size, accounts for the general features of levels of genetic variability in deep-sea invertebrates.  相似文献   

20.
Abstract:  The U.S. Fish and Wildlife Service manages the 38-million-ha National Wildlife Refuge System, which is devoted primarily to wildlife conservation. I examined the capacity of the refuge system to conserve federally listed threatened and endangered animal species. Population viability data for a random sample of these species were analyzed and extrapolated. Three levels of population viability were distinguished: outbreeding, demographic, and evolutionary. One hundred eighty-six of the 514 federally listed animal species reside in whole or in part on the refuge system. Of these 186 species, approximately 81, 101, and 107 are supported by the system at evolutionary, demographic, and outbreeding viability levels, respectively. These figures correspond to 16%, 19%, and 21% of the 514 federally listed animal species, respectively. Various federal policies and programs facilitate the expansion of the refuge system, but other federal policies and programs facilitate economic growth, which tends to require the conversion of habitats faster than it provides for habitat conservation. Therefore the long-run effectiveness, extent, and endurance of the refuge system will depend largely on macroeconomic policy context.  相似文献   

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