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1.
为评估死菌DNA对厌氧消化污泥抗生素抗性基因(ARGs)和微生物群落分析的潜在干扰,本研究对3种不同类型厌氧消化污泥进行叠氮溴化丙锭(PMA)处理,比较在PMA屏蔽死菌DNA PCR扩增情况下污泥ARGs和微生物群落分析结果与未经PMA处理情况下的差异.结果表明,经PMA处理后,剩余污泥自厌氧消化样品和高含固厌氧消化污泥样品中的ARGs丰度分别下降了41%~86%和74%~98%;污泥水解液厌氧消化15 d后的污泥样品中ARGs下降幅度相对较小,但降幅最高也达到34%.PMA处理对3个来源不同的厌氧消化污泥微生物群落组成分析结果呈现不同程度的影响,对高含固厌氧消化污泥的微生物群落结构分析影响最为显著.在经PMA处理与未经PMA处理两种情况下,厌氧消化污泥ARGs与微生物群落组成相关性分析的结果也截然不同.研究证明了死菌DNA对厌氧消化污泥ARGs和微生物群落分析的潜在干扰,采用PMA预处理能够更准确地反映厌氧消化污泥中的微生物群落及菌体携带ARGs的特征.  相似文献   

2.
采用盆栽方法研究再生水、再生水+Pb、清水+Pb处理浇灌萝卜,以清水浇灌为对照对萝卜根际土壤微生物群落的影响进行研究。结果表明:(1)土壤总PLFA含量及各菌群生物量从大到小依次为:再生水再生水+Pb清水清水+Pb。再生水灌溉有利于萝卜根际微生物各类群数量的增加,丰富微生物多样性。用含铅的溶液(再生水+Pb、清水+Pb)浇灌萝卜,可抑制土壤微生物各类群的数量,G-受到的抑制尤为明显。(2)主成分分析表明,再生水灌溉与对照相比,土壤微生物群落结构差异最大。(3)土壤微生物各类群与土壤速效钾、硝酸盐氮含量呈极显著正相关(P0.01),真菌、放线菌与土壤有机质含量,G~+、G~-菌与p H均呈极显著正相关(P0.01)。G~+、G~-与萝卜地下鲜重均呈极显著负相关(P0.01),土壤微生物各类群与地上部分硝酸盐含量、与根冠比呈极显著正相关(P0.01)。  相似文献   

3.
应用基于16S rDNA的PCR-DGGE对超声波-好氧/缺氧污泥消化过程中微生物种群的多样性进行研究.通过SDS细胞裂解法提取不同时期污泥中的基因组DNA,采用通用引物进行V3区域PCR扩增,长约190 bp的PCR产物经DGGE分离后,获得污泥微生物群落的DNA特征指纹图谱,对条带进行切胶测序,使用序列数据进行同源性分析并建立系统发育树.DGGE图谱表明,在反应器运行的不同时期,微生物群落结构发生动态演替.5、10、15、20、25 d微生物相似性与0 d相比分别为61.2%、48.2%、46.4%、42.6%、41.7%,总细菌Shannon指数经历了一个从逐渐减少到趋于稳定的过程,这表明超声波改变污泥内部性质,导致微生物多样性的降低.UPGMA聚类分析将DGGE图谱区分为三大族群并对应于不同运行时期.测序结果表明,超声波-好氧/缺氧污泥消化中微生物群落主要为Firmicute、Genuscitrobacter、Bacilli、α-Proteobacteria、β-Proteobacteria.  相似文献   

4.
变性梯度凝胶电泳技术(DGGE)在微生物生态学领域有着广泛的应用.本文应用DGGE技术对处理含氨废气的生物滤塔中微生物多样性随时间的变化进行了研究.在生物滤塔运行的不同时间采集滤塔中的填料样品,进行了生物滤塔对氨处理效果的分析和DGGE分析.结果显示,污泥和混合填料生物滤塔氨的出气浓度在经过一段时间后,逐渐升高,而堆肥生物滤塔的运行情况较好,对氨的去除效率始终在98%以上.PCR-DGGE图谱显示,不同时间的相同填料中微生物DGGE图谱有着明显的差异性.Shannon指数分析表明,填料中微生物的多样性都随着反应器运行时间的延长而有所减少.运行一个月后,混合填料的微生物多样性指数最低为0.389;其次为污泥填料,其多样性指数为0.473;堆肥填料的微生物多样性程度最高为0.569.生物滤塔对氨的去除效果与填料中微生物多样性Shannon指数之间有一定的相关关系.主成分分析(PCA)显示对于堆肥和污泥来说,填料样品之间微生物群落结构相似性较高,而混合填料样品间的微生物群落结构相似性较低.  相似文献   

5.
Biodegradation mechanisms and microbial functional diversity during coupled p-nitrophenol (PNP) and p-aminophenol (PAP) degradation were studied in a bioelectrochemical system. PNP in the biocathode and PAP in the bioanode were almost completely removed within 28hr and 68hr respectively. The degradation followed the steps including hydrating hydroxyalkylation, dehydrogenating carbonylation, and hydrolating ring cleavage, etc. Metagemomic analysis based on the KEGG and eggNOG database annotations revealed the microbial composition and functional genes/enzymes related to phenol degradation in the system. The predominant bacteria genera were Lautropia, Pandoraea, Thiobacillus, Ignavibacterium, Truepera and Hyphomicrobium. The recognized biodegradation genes/enzymes related to pollutant degradation were as follows: pmo, hbd, & ppo for phenol degradation, nzba, amie, & badh for aromatic degradation, and CYP & p450 for xenobiotics degradation, etc. The co-occurrence of ARGs (antibiotic resistant genes), such as adeF, MexJ, ErmF, PDC-93 and Escherichia_coli_mdfA, etc., were annotated in CARD database during the biodegradation process. The Proteobacteria & Actinobacteria phylum was the primary host of both the biodegradation genes & ARGs in this system. The microbial functional diversity ensured the effective biodegradation of the phenol pollutants in the bioelectrochemical system.  相似文献   

6.
石油污染土壤的生物修复技术及微生物生态效应   总被引:10,自引:5,他引:5  
利用投菌法和生物刺激法对陕北子长石油污染土壤进行微生物修复研究.通过利用红外分光光度法测定不同处理方法对石油烃的去除效果确定了修复陕北石油污染土壤的最佳方案.修复过程中利用最大可能计数法(MPN)、PCR-琼脂糖电泳法、PCR-DGGE法分别测定了石油烃降解菌数目、催化基因、土壤微生物多样性对土壤微生物生态效应进行研究.结果发现石油污染土壤不同生物处理修复效果为:生物刺激(加入N、P营养物质)生物强化(投加降解菌)其他.土壤中石油烃降解率与可降解石油烃的催化基因含量之间存在正相关关系,修复过程中土壤中的石油烃和烷烃降解菌数量显著多于多环芳烃降解菌数量,投加外源降解菌SZ-1可以显著提高土壤细菌群落的多样性.研究结果有助于深入理解生物修复石油土壤过程中的微生物生态效应变化.  相似文献   

7.
于2012年5月、6月采集了大亚湾9个站点的表层水样,利用PCR-变性梯度凝胶电泳(PCR-DGGE)技术对浮游植物DNA指纹进行了分析,同时通过显微镜观察对浮游植物进行了定性定量分析.研究结果显示,大亚湾浮游植物种类丰富,共分析鉴定出浮游植物72种;浮游植物DNA指纹也较为丰富,2个月份指纹条带数分别为26条和28条.DGGE指纹条带数一般远远低于浮游植物种类数,在剔除了相对含量小于0.1%的非优势种后,DNA条带数与种类数变化趋势相近,说明DNA指纹图谱能较大程度地反映浮游植物优势种群的组成,而对于相对含量较少的物种,可能会由于优势种的屏蔽作用而被掩盖.DNA指纹图谱与浮游植物群落结构的聚类分析结果相近,富营养化的近岸站点聚在一起,而远岸站点聚为一类.虽然目前大亚湾浮游植物群落结构中以硅藻占据优势,但在某些站点大量出现的甲藻和蓝细菌值得进一步关注.本研究结果表明PCR-DGGE技术可在一定程度上运用于浮游植物群落结构分析.  相似文献   

8.
The characterization of microbial communities of different depth sediment samples was examined by a culture-independent method and compared with physicochemical parameters, those are organic matter (OM), total nitrogen (TN), total phosphorus (TP), pH and redox potential (Eh). Total genomic DNA was extracted from samples derived from different depths. After they were amplified with the GC-341 f/907r primer sets of partial bacterial 16S rRNA genes, the products were separated by denaturing gradient gel electrophoresis (DGGE). The profile of DGGE fingerprints of different depth sediment samples revealed that the community structure remained relatively stable along the entire 45 cm sediment core, however, principal-component analysis of DGGE patterns revealed that at greater sediment depths, successional shifts in community structure were evident. The principle coordinates analysis suggested that the bacterial communities along the sediment core could be separated into two groups, which were located 0-20 cm and 21-45 cm, respectively. The sequencing dominant bands demonstrated that the major phylogenetic groups identified by DGGE belonged to Bacillus, Bacterium, Brevibacillus, Exiguobacterium, γ-Proteobacterium, Acinetobacter sp. and some uncultured or unidentified bacteria. The results indicated the existence of highly diverse bacterial community in the lake sediment core.  相似文献   

9.
赵慧慧  肖娴  裴孟  赵远  梁玉婷 《环境科学》2016,37(9):3582-3589
长期石油污染改变了土壤微生物群落组成,降低了群落多样性,对生态系统造成严重的威胁.为了探讨长期石油污染对盐碱化土壤中微生物物种间相互作用关系的影响,采集胜利油田石油污染土壤和未污染土壤,利用随机矩阵方法构建分子生态网络.结果发现,污染土壤和未污染土壤中微生物功能基因组的分子生态网络存在显著差异(P0.001).与未污染土壤相比,污染土壤的网络节点数、连接数、平均连通度、模块数和模块性都显著降低,说明在石油污染的影响下土壤微生物网络拓扑结构发生变化;污染土壤和未污染土壤的模块枢纽基因、连接器基因均没有重叠,模块枢纽基因和连接器基因的网络拓扑角色发生了变化.通过构建烷烃、多环芳烃降解基因网络,发现负相互作用的比例较大,这可能反映了微生物功能群落间的竞争关系.  相似文献   

10.
生物-化学强化处理城市污水除磷试验   总被引:1,自引:0,他引:1       下载免费PDF全文
以PFS(聚合硫酸铁)和PAS(聚合硫酸铝)为混凝剂,分别在化学反应器和SBR(序批式活性污泥反应器)内,研究模拟城市污水的化学除磷和生物-化学强化除磷的效果. 结果表明:在化学反应器内,投加PFS和PAS均可提高TP的去除率,当投加量分别为0.20和1.00 mL/L时,出水ρ(TP)均在0.50 mg/L以下,TP去除率均超过90.0%. 在生物反应器内,投加PFS和PAS均可强化生物除磷效果,与化学除磷相比,PFS投加量需增至0.25 mL/L,TP去除率才可达到90.0%,单独投加PFS的除磷效果好于PFS强化生物除磷效果;而PAS投加量降至0.50 mL/L,出水ρ(TP)即低于0.50 mg/L,TP去除率可达到90.0%以上,PAS强化生物除磷效果好于单独投加PAS的除磷效果. 在生物反应器内投加PAS,TN去除率可提高12.5%;而投加PFS后TN去除率则下降3.3%. 在生物反应器内投加PFS和PAS,能将CODCr去除率从82.6%提至90.0%以上. 采用PCR-DGGE技术分析微生物群落特征发现,投加混凝剂的反应器内生物群落数量有所减少,但同时产生一些新生物种群,强化了功能种群的处理效果.   相似文献   

11.
以典型的再生水补水河流湿地为例,采用末端限制性片段长度多态性技术(T-RFLP)分析河道不同空间香蒲根际细菌群落结构差异,并借助单因素方差分析(one-way ANOVA)、Spearman等级相关分析和典范对应分析(CCA)方法解析麻峪湿地香蒲根际细菌群落结构空间差异特征的形成原因,以揭示再生水补水过程对河道湿地香蒲根际细菌群落的影响,并尝试找出空间差异形成的驱动因子.结果表明:随再生水干扰强度的增加,各类群细菌群落的丰富度、均匀度及多样性均呈现不同程度的降低趋势;其中γ-变形菌门(Gammaproteobacteria)、δ-变形菌门(Deltaproteobacteria)和绿弯菌门(Chloroflexi)、ε-变形菌门(Epsilonproteobacteria)和放线菌门(Actinobacteria)在再生水影响下均显著降低(P<0.05).Spearman等级相关分析显示pH值、DO(溶解氧)、TDS(总溶解固体)、ORP(氧化还原电位)、Sal(盐度)和NH4+-N(氨氮)与植物根际细菌群落多样性空间演替紧密相关.CCA分析结果进一步表明再生水补水口的上游细菌群落与TN(总氮)、TOC(总有机碳)及重金属Cr、Ni、Cu具有密切关系,这可能与这些污染物累积效应有关;补水口附近植物根际细菌群落则因补水口再生水水质不同而具显著差异,其中第Ⅱa类群主要受到水质变量pH值影响较大,而第Ⅱb类群与T(温度)、ORP和NH4+-N具有较高的相关性;补水口的下游细菌群落则因水体内源杂质及人为活动影响而同样与TOC及持久性痕量重金属生物循环密切相关.  相似文献   

12.
Microbial phosphorus (P) turnover is critical in C utilization efficiency in agroecosystems. It is therefore necessary to understand the P mobilization processes occurring during P fertilization in order to ensure both crop yield and environmental quality. Here, we established a controlled pot experiment containing soil amended with three different levels of starter P fertilizer and collected soil samples after 30, 60, and 90 days of incubation. Quantitative microbial element cycling (QMEC) smart chip technology and 16S rRNA gene sequencing were used to investigate functional gene structures involved in carbon, nitrogen and P cycling and the bacterial community composition of the collected samples. Although P fertilization did not significantly affect the structure of the soil microbial community, some rare microbiota were changed in particular phosphorus-solubilizing bacteria were enriched at the high P fertilization level, suggesting that the rare taxa make an important contribution to P turnover. P fertilization also altered the functional gene structure, and high P concentrations enhanced the functional gene diversity and abundance. Partial redundancy analysis further revealed that changes in rare taxa and functional genes of soil microorganisms drive the alteration of soil P pools. These findings extend our understanding of the microbial mechanisms of P turnover.  相似文献   

13.
焦化废水是毒性很大的典型工业废水,生物处理过程中需要微生物具备很强的适应能力.以探讨焦化废水对微生物的毒性抑制以及微生物对焦化废水的适应过程为目的,通过于焦化废水原水中接种市政污泥,在考察COD、苯酚、氨氮和硫氰化物等主要污染物指标降解的基础上,运用Illumina高通量测序平台分析降解过程微生物群落组成及多样性变化的响应关系.结果表明,接种了市政污泥的焦化废水培养16 h后COD开始下降,40 h时苯酚降解了97.14%,72 h时硫氰化物开始降解,96 h时硫氰化物浓度低于检测限,氨氮浓度随着硫氰化物的降解而升高.群落测序分析表明,不同培养阶段污泥中微生物表现出群落结构及丰度上的差异:在苯酚降解阶段,苯酚优势降解菌Acinetobacter、Pseudomonas的丰度增大,48 h总相对丰度为13.04%;在硫氰化物降解阶段,Sphingobacterium、Brevundimonas、Lysobacter、Chryseobacterium为主导菌属,96 h时其总相对丰度为16.13%;在144 h阶段,优势菌属则变为Fluviicola、Stenotrophomonas和Thiobacillus,总相对丰度为22.45%.由此认为,市政污泥克服了焦化废水中毒性成分的抑制作用之后能迅速适应环境,表现出微生物群落结构随着废水降解成分的变化而改变,环境因子和降解功能菌之间的竞争是群落结构演变的主要因素.  相似文献   

14.
南淝河细菌群落结构的研究   总被引:1,自引:0,他引:1  
为了研究受污染城市河道南淝河在进行修复前微生物群落的多样性,于2009年10月(秋季)和2010年1月(冬季)在南淝河河道中采集水样,直接从水中提取总DNA,用细菌16S rDNA的通用引物对V3区进行PCR扩增,PCR产物经DGGE(变形梯度凝胶电泳)分离后,获得水体细菌群落的DGGE指纹图谱;同时运用平板计数法对水体的异养细菌进行计数。结果表明:不同季节,不同位点南淝河的细菌群落的多样性都很丰富,但不同季节优势种有差异;相同季节临近位点细菌种群结构的相似性较高,且有顺河而下相近位点相似性增高的趋势。南淝河水体异养细菌数量秋季为20.3×103~616.3×103CFU/mL。冬季为2.3×103~53.6×103CFU/mL,冬季异养细菌数量比秋季低一个数量级,并且从上游到下游逐渐增多。但与其他同等富营养化水平的水体相比,其异养细菌含量较低。  相似文献   

15.
基于Illumina MiSeq高通量测序技术,以高原生境下A2O工艺的活性污泥为研究对象,探讨不同温度下微生物群落结构、丰度及相关性.结合污染物分解、吸附及转化等代谢过程中的主要功能蛋白、功能基因、酶的种类及丰度在碳、氮、磷等污染物代谢途径中的作用,从生物化学和分子水平的角度分析了高原地区A2O工艺对污水处理的微生物学机制.结果表明:优势细菌门为变形菌门、拟杆菌门、放线菌门、厚壁菌门及绿弯菌门,优势细菌属为norank_f__AKYH767、腐败螺旋菌、Ottowia、伯克氏菌、IMCC26207、Novosphingobium.污染物去除和微生物群落发挥作用的效果在15℃为最优,微生物群落的COG、代谢途径、基因和酶活性最适宜的温度为20℃.主要功能蛋白为一般功能预测、氨基酸运输与代谢和基因转录;主要代谢途径为:ABC转运蛋白,细菌双组分调节系统,嘌呤、核糖体及嘧啶等代谢,主要功能基因的产物(酶)为:烯酰辅酶A水合酶、乙酰辅酶A C-乙酰转移酶、醛脱氢酶(NAD+)、硫代硫酸盐及外多磷酸酶.  相似文献   

16.
细菌群落是实现厌氧氨氧化系统高效脱氮的核心,而厌氧氨氧化启动过程细菌群落多样性及其功能特征仍未被充分阐明.本研究采用升流式厌氧污泥床(UASB)反应器进行厌氧氨氧化系统启动,利用16S rRNA基因高通量测序技术并结合PICRUSt2功能预测分析,研究启动过程不同时间(d0、d30、d60和d90)细菌群落多样性及功能动态变化特征.结果表明,启动过程共检测到48个门、111个纲、269个目、457个科、840个属和1497个种;Candidatus_BrocadiaCandidatus_Kuenenia为检测到的厌氧氨氧化菌,且它们的相对丰度在启动过程不同时间存在显著差异(P<0.05).启动过程,细菌群落α多样性指数整体呈现显著的降低趋势(P<0.05),细菌群落结构呈现出明显的空间分异特征,且差异显著(R=0.846,P<0.01).PICRUSt2功能预测分析表明,启动过程,细菌群落具有丰富的功能多样性,一级功能层表现为有机系统和代谢方面较为活跃,二级功能层子功能基因丰度在厌氧氨氧化启动过程发生明显变化;细菌群落涉及49个参与氮素代谢的相关功能基因,且不同时间阶段参与硝化、反硝化、厌氧氨氧化、硝酸盐同化/异化还原和亚硝酸盐同化/异化还原过程的相关功能基因丰度发生明显变化.  相似文献   

17.
处理含酚废水曝气生物流化床中丝状菌种群结构的解析   总被引:1,自引:0,他引:1  
应用曝气生物流化床反应器(ABFT)处理含酚废水,随着进水ρ(苯酚)由100 mg/L提高到400 mg/L,苯酚的去除率稳定在100%左右,且苯酚的去除主要发生在4个反应池中的第一池. 利用扫描电镜(SEM)、荧光原位杂交(FISH)和变性梯度凝胶电泳(DGGE)技术对反应器内微生物种群进行分析. 扫描电镜结果表明,随着反应器进水ρ(苯酚)的提高,填料生物膜微生物逐渐演变为以丝状菌为主. 针对SSU rRNA的荧光原位杂交结果表明,反应器内丝状微生物主要为真菌. 分别对细菌和真菌的16S rDNA和18S rDNA 进行PCR-DGGE分析,结果表明,反应器内主要的苯酚降解菌为克氏地霉(Geotrichum klebahnii),同时存在发硫菌等丝状细菌. 聚类及多样性分析表明,苯酚对微生物种群表现出很强的选择性.   相似文献   

18.
The bacterial community structures in two sewage treatment plants with different processes and performance were investigated by denaturing gradient gel electrophoresis (DGGE) of nested polymerase chain reaction (nested PCR) amplified 16S rRNA gene fragments with group-specific primers. Samples of raw sewage and treated effluents were amplified using the whole-cell PCR method, and the activated sludge samples were amplified using the extracted genomic DNA before the PCR products were loaded on the same DGGE gel for bacterial community analysis. Ammonia-oxidizing bacterial and actinomycetic community analysis were also carried out to investigate the relationship between specific population structures and system or sludge performance. The two plants demonstrated a similarity in bacterial community structures of raw sewage and activated sludge, but they had different effluent populations. Many dominant bacterial populations of raw sewage did not appear in the activated sludge samples, suggesting that the dominant bacterial populations in raw sewage might not play an important role during wastewater treatment. Although the two plants had different sludge properties in terms of settleability and foam forming ability, they demonstrated similar actinomycetic community structures. For activated sludge with bad settling performance, the treated water presented a similar DGGE pattern with that of activated sludge, indicating the nonselective washout of bacteria from the system. The plant with better ammonium removal efficiency showed higher ammonia-oxidizing bacteria species richness. Analysis of sequencing results showed that the major populations in raw sewage were uncultured bacterium, while in activated sludge the predominant populations were beta proteobacteria.  相似文献   

19.
Nitrogenous heterocyclic compounds are key pollutants in coking wastewater; however, the functional potential of microbial communities for biodegradation of such contaminants during biological treatment is still elusive. Herein, a high throughput functional gene array (GeoChip 5.0) in combination with Illumina HiSeq2500 sequencing was used to compare and characterize the microbial community functional structure in a long run (500 days) bench scale bioreactor treating coking wastewater, with a control system treating synthetic wastewater. Despite the inhibitory toxic pollutants, GeoChip 5.0 detected almost all key functional gene (average 61,940 genes) categories in the coking wastewater sludge. With higher abundance, aromatic ring cleavage dioxygenase genes including multi ring1,2diox; one ring2,3diox; catechol represented significant functional potential for degradation of aromatic pollutants which was further confirmed by Illumina HiSeq2500 analysis results. Response ratio analysis revealed that three nitrogenous compound degrading genes- nbzA (nitro-aromatics), tdnB (aniline), and scnABC (thiocyanate) were unique for coking wastewater treatment, which might be strong cause to increase ammonia level during the aerobic process. Additionally, HiSeq2500 elucidated carbozole and isoquinoline degradation genes in the system. These findings expanded our understanding on functional potential of microbial communities to remove organic nitrogenous pollutants; hence it will be useful in optimization strategies for biological treatment of coking wastewater.  相似文献   

20.
The fungicide vinclozolin and insecticide λ-cyhalothrin are widely used to control canola (Brassica spp.) diseases and insect pests, respectively, in Canada. We investigated non-target effects of these pesticides, applied at recommended rates, on soil microbial biomass, functional bacterial diversity and functional community structure of soil bacteria (by evaluating patterns of C substrate utilization) in canola rhizosphere and bulk soil at three locations in Alberta from 2002 to 2004. Experimental treatments were (a) untreated control, (b) vinclozolin fungicide foliar application, (c) λ-cyhalothrin insecticide foliar application, and (d) vinclozolin and λ-cyhalothrin applications. No significant pesticide effects on soil microbial biomass or functional bacterial diversity were observed, but the functional structures of soil bacteria were altered. In 1 of 12 cases, the control treatment had a different soil bacterial community structure from the 3 pesticide treatments. The fungicide treatment had different bacterial community structures from the control or insecticide treatments in 3 of 12 cases, the insecticide treatment had different community structures from the control or fungicide treatments in 4 of 12 cases, and the combined fungicide and insecticide treatment had different community structures from the other treatments in 3 of 12 cases. Therefore, evaluating soil bacterial functional structures revealed pesticide effects that were not detected when bacterial diversity or microbial biomass were measured in canola rhizosphere or bulk soil.  相似文献   

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