Sperm traits of the quacking frog, Crinia georgiana: intra- and interpopulation variation in a species with a high risk of sperm competition

Sperm traits often show extreme variation both between and within species. Between-species variation may often be interpreted in the context of a sperm competition theory, but within-species variation has remained unexplained. Previous studies on intraspecific variation in sperm traits have focused on a limited set of variables and may have failed to explain observed variation because of potential trade-offs between different sperm traits. We report on variation in number, size, motility and longevity of sperm in the frog Crinia georgiana, a species where sperm competition is common. We found intrapopulation variation in sperm size and motility and interpopulation variation in relative sperm number and size. When we combined relative sperm number and size into one variable, and motility and longevity into another, we found significant interpopulation variation in these variables as well. We also detected considerable intra- and significant interpopulation variation in cumulative sperm quality, a combination of all four sperm traits. Furthermore, a significant effect of the interaction between population origin and male size on sperm characteristics indicated interpopulation variation in the strength of selection acting on sperm traits of males adopting different mating strategies. We discuss heterogeneity in the reproductive environment, a complex genetic background in the determination of sperm characteristics and varying levels of developmental noise as potential contributors to the observed variation in sperm traits.     

Conservation Value of Sites of Hybridization in Peripheral Populations of Rare Plant Species

Abstract:  Populations at the periphery of a species' range are of interest to conservation biologists because they can show marked genetic differentiation from populations at the center of a range and because of potential hybridization among rare and common species. We examined two closely related Cyclamen species. One is a narrow endemic, and the other is more geographically widespread (both protected by law in continental southern France). We used floral traits and genetic variability to test for hybridization among the species in peripheral populations of the rare species. The species co-occurred on Corsica in a disjunct, peripheral part of the distribution of the endemic species and in an ecologically marginal area for the widespread species. The two species have hybridized and the endemic species showed high levels of introgression with its widespread congener. Genetic and floral variability in sites with both species was markedly higher than in sites with a single species. Our results highlight the need for a conservation strategy that integrates hybrid populations because they represent a source of novel diversity that may have adaptive potential.     

Genetic Diversity and Population Size in Four Rare Southern Appalachian Plant Species

Allozyme diversity was examined in four rare, high-montane plant species from the Appalachian Mountains of southeastern North America. These species may represent relictual members or descendants of an alpine community that was more widespread during the late Pleistocene. We sampled five populations of Geum radiatum (Rosaceae), Carex misera (Cyperaceae), Trichophorum cespitosum (Cyperaceae), and the four known populations of Calamagrostis cainii (Poaceae). Genetic diversity was low for all species but was typical of that found for plant species with limited ranges. Low genetic diversity may reflect historical events associated with changes in the species' biogeography. As the Pleistocene climate warmed, suitable habitat decreased in areal extent and became fragmented, probably resulting in smaller, more-isolated populations. In recent times these species, which co-occur in fragile rock outcrop habitats, have been adversely affected by human activities. Genetic analyses revealed reduced diversity in populations of decreasing size for three species. Estimates of gene flow were low ( Nm < 1.0) in all four species. Positive associations between genetic diversity and population size, evidence of recent population declines, and the low estimates of gene flow suggest that genetic drift may play a prominent role in shaping the present-day genetic composition of these species. Furthermore, these data suggest that the genetically depauperate populations are unlikely to regain genetic variation without human intervention.     

Conservation and Distribution of Genetic Variation in a Polytypic Species, the Cutthroat Trout

Abstract: The cutthroat trout (Salmo clarki) presents a series of unusual and difficult problems in conservation biology. As many as 16 subspecies have been recognized in the recent literature. The genetic distance between subspecies based upon 46 enzyme loci ranges from that usually seen between congeneric species to virtual genetic identity. Subspecies from the western portion of the range of the cutthroat trout are genetically more similar to rainbow trout (Salmo gairdneri) than they are to the other subspecies of cutthroat trout. In addition, much of the genetic variation within the west-slope cutthroat trout (S. c. lewisi) results from alleles found in only one or two local populations, but they often occur at high frequencies in those populations. Thus, preserving the genetic variation in westslope cutthroat trout entails preserving as many local populations as possible.
Captive populations of cutthroat trout present a series of opportunities and genetic problems. A number of management agencies are using captive populations to supplement and reestablish natural populations. Basic genetic principles must be understood and followed in establishing and maintaining captive populations. We describe examples of unsuccessful and successful efforts by management agencies to develop captive populations.
The greatest danger to the conservation of the cutthroat trout is introgressive hybridization among subspecies and with rainbow trout. Several factors make salmonid fishes especially susceptible to problems associated with introgressive hybridization. We conclude that biochemical analysis provides a more reliable and informative means of detecting interbreeding than morphological characters. Interbreeding between westslope and Yellowstone cutthroat trout and nonnative Salmo appears to be common and widespread throughout the natural range of these subspecies.     

Intraspecific Chromosome Number Variation: a Neglected Threat to the Conservation of Rare Plants

Abstract: The effectiveness of rare plant conservation will increase when life history, demographic, and genetic data are considered simultaneously. Inbreeding depression is a widely recognized genetic concern in rare plant conservation, and the mixing of genetically diverse populations in restoration efforts is a common remedy. Nevertheless, if populations with unrecognized intraspecific chromosome variation are crossed, progeny fitness losses will range from partial to complete sterility, and reintroductions and population augmentation of rare plants may fail. To assess the current state of cytological knowledge of threatened and endangered plants in the continental United States, we searched available resources for chromosome counts. We also reviewed recovery plans to discern whether recovery criteria potentially place listed species at risk by requiring reintroductions or population augmentation in the absence of cytological information. Over half the plants lacked a chromosome count, and when a taxon did have a count it generally originated from a sampling intensity too limited to detect intraspecific chromosome variation. Despite limited past cytological sampling, we found 11 plants with documented intraspecific cytological variation, while 8 others were ambiguous for intraspecific chromosome variation. Nevertheless, only one recovery plan addressed the chromosome differences. Inadequate within‐species cytological characterization, incomplete sampling among listed taxa, and the prevalence of interspecific and intraspecific chromosome variation in listed genera, suggests that other rare plants are likely to have intraspecific chromosome variation. Nearly 90% of all recovery plans called for reintroductions or population augmentation as part of recovery criteria despite the dearth of cytological knowledge. We recommend screening rare plants for intraspecific chromosome variation before reintroductions or population augmentation projects are undertaken to safeguard against inadvertent mixtures of incompatible cytotypes.     

A Hierarchical View of Genetic Structure in the Rare Annual Plant Clarkia springvillensis

Genetic structure at several spatial scales was examined in the rare California annual, Clarkia springvillensis . Using seven isozyme-encoding loci as genetic markers, we assessed the amount and distribution of genetic variation among three populations and eight subpopulations. Total genetic variation was lower than in species with similar life history traits but equivalent to that of other endemic plants. Spatial autocorrelation showed some evidence for very limited differentiation within subpopulations at a scale of 1–2 m. The subpopulations, separated by tens of meters, were found to be more differentiated from each other ( F _sp = 0.084) on average than were populations ( F,pt = 0.017). This local genetic differentiation was not correlated with physical distance between subpopulations. The low F_pt estimates suggest that substantial gene flow is occurring among populations. However, the lack of correlation between genetic and geographic distances and the significant differentiation of subpopulations suggest that genetic drift is occurring within populations. Therefore, we believe the apparent homogeneity of populations is due to each population's gene frequencies' being an average of several divergent subpopulations. If drift is causing differentiation within populations, it may eventually cause differentiation between populations. The importance of using a hierarchical approach to evaluating genetic structure is clear. Patterns occurring at one spatial scale may not be evident at others. One should not necessarily conclude that gene flow is substantial and that the risk of genetic erosion via drift is negligible just because differentiation between populations is small; the system may not be at equilibrium. This lesson is particularly important when recent changes in climate or land use are apparent.     

Genetic structure and allozyme variation of sea bass (Dicentrarchus labrax and D. punctatus) in the Mediterranean Sea

This paper reports data on 28 allozyme loci in wild and artificially reared sea bass (Dicentrarchus labrax) samples, originating from either coastal lagoon or marine sites in the Mediterranean Sea. F _ST analysis (θ estimator) indicated strong genetic structuring among populations; around 34% of the overall genetic variation is due to interpopulation variation. Pairwise θ estimates showed that, on average, the degree of genetic structuring was much higher between marine populations than between samples from lagoons. Six polymorphic loci showed differences in allele frequencies between marine and lagoon samples. Multivariate analyses of individual allozymic profiles and of allele frequencies suggested that different arrays of genotypes prevail in lagoons compared to marine samples, particularly at those loci that, on the basis of previous acclimation experiments, had been implicated in adaptation to freshwater. On the other hand, variation at “neutral” allozyme loci reflects to a greater extent the geographic location of populations. Allozyme differentiation was also studied in a D. labrax population from the Portuguese coast. Average genetic distance between this population and the Mediterranean populations was quite high (Nei's D = 0.236) and calls into question the taxonomic status of the Portuguese population. Finally, genetic relationships between D. labrax and D. punctatus were evaluated. Average Nei's D was 0.648, revealing high genetic differentiation between the two species, even for two sympatric populations of these species in Egypt; thus gene flow was not indicated between species. Received: 24 October 1996 / Accepted: 27 November 1996     

An investigation of genetic population structure in blue crabs,Callinectes sapidus,using nuclear gene sequences

Spatial and temporal genetic heterogeneity in the sequences of nuclear protein-coding genes were investigated in populations of the blue crab, Callinectes sapidus. Haplotype frequencies of these novel markers were determined for adult crabs collected along 300 km in the northern Gulf of Mexico in two different years (2010 and 2011), as well as for megalopal recruits collected in 2010. Tests of genetic differentiation among all locations and between locations spanning known genetic breaks in other species were conducted. In addition, samples from distant locations within the range of C. sapidus were used to assess genetic divergence on a broader geographic scale. Significant between-year differences were found for adults at one location and near significant spatial differentiation was found across northern Gulf of Mexico locations in 2010. These results suggest that although the large population sizes and meroplanktonic life history of blue crabs promote widespread gene flow on a regional scale, genetic composition can change over just one year. Substantial divergence between the northern Gulf of Mexico and Venezuela suggests the possibility that temporal shifts in haplotype frequencies could result from variation in the rate of immigration from genetically distinct source populations. The possible effects of the Deepwater Horizon Oil Spill and attendant fisheries closures during the sampling phase of this study are also considered.     

Bathymetric patterns of genetic variation in a deep-sea protobranch bivalve, Deminucula atacellana

The origin of the deep-sea benthic fauna is poorly understood and represents an enormous gap in our understanding of basic evolutionary phenomena. One obstacle to studying evolutionary patterns in the deep sea has been the technical difficulty of measuring genetic variation in species that are typically minute, rare, and must be recovered from extreme depths. We used molecular genetic techniques to quantify variation in the 16S rRNA mitochondrial gene within and among populations of the common protobranch bivalve Deminucula atacellana (Schenck, 1939). We analyzed 89 individuals from nine samples collected in the 1960s along a depth gradient from 1100 to 3800 m in the western North Atlantic. Genetic variability within populations is much lower than between populations, and peak haplotype numbers occur near the center of its depth distribution. Continental slope (<2500 m) and rise (>2500 m) populations were genetically distinct despite the lack of any obvious topographic or oceanographic features that would impede gene flow. These findings indicate that the deep-sea macrofauna can have strong population structure over small (134 km) spatial scales, similar to that observed in shallow-water and terrestrial organisms. This surprisingly high biodiversity at the genetic level affords the potential for adaptation and evolutionary diversification, the ultimate historical causes of high species diversity in the deep-sea benthos. Received: 24 July 1997 / Accepted: 26 January 1998     

Genetic structuring and gene flow in Cerastoderma glaucum (Bivalvia: Cardiidae): evidence from allozyme variation at different geographic scales

Genetic variation at 16 enzyme loci was analysed in 20 Mediterranean and 1 Baltic population of Cerastoderma glaucum. Spatial genetic variation at different geographic scales was investigated. In general, this species was fairly genetically structured (over all loci Š=0.088), according to the fragmentary nature of its habitat. Spatial structuring of genetic diversity was shown to follow different models, depending on the geographic scale considered: a stepping-stone model provided a good fit at a wide scale, with gene flow inversely related to geographic distance, whereas at small scale, genetic relationships among samples could not be interpreted as simply the effect of physical distance among populations. Results are discussed taking into account the intrinsic and extrinsic factors which are most likely to affect the patterns of genetic structuring in coastal marine animals. Electronic supplementary material to this paper can be obtained by using the Springer LINK server located at http://dx.doi.org/10.1007/s00227-001-0753-x     

Spatio-temporal patterns in the genetic structure of recently settled blue mussels (<Emphasis Type="Italic">Mytilus</Emphasis> spp.) across a hybrid zone

Previous studies of a hybrid zone between the mussels Mytilus edulis Linnaeus and M. galloprovincialis Lamarck have not resolved the relative importance of the genetic composition of settling larval cohorts versus post-settlement selection in determining the distribution of the parental species and their hybrids. In the present study, recently settled mussels (spat) were collected from 20 sites in southwest England throughout the summer and fall (May–October) in 1998 and 1999. This study investigated the spatio-temporal patterns of settlement and genetics of mussel spat by genetically identifying M. edulis, M. galloprovincialis and their hybrids using the diagnostic PCR marker Glu-5. Settlement was observed earlier in populations of M. edulis than in populations of M. galloprovincialis. Settlement occurred in hybrid populations at times intermediate to and overlapping with both of the parental populations. Temporal genetic variation within years was rare at most sites, while there was some variation between the two years. Spatial genetic variation, however, was common among spat settling within the hybrid populations and matched that observed in small, sub-adults at the same sites. No consistent directional changes in allele frequency were observed over the course of several weeks after settlement. These data suggest that the observed spatial variation in the adult populations is the result of spatial variation in settling larval cohorts and not of either temporal genetic variation or of selection soon after settlement.Communicated by J.P. Grassle, New Brunswick     

When Are Peripheral Populations Valuable for Conservation?

A great deal of effort is spent protecting geographically peripheral populations of widespread species. We consider under what conditions it is appropriate to expend resources to protect these populations. The conservation value of peripheral populations depends upon their genetic divergence from other conspecific populations. Peripheral populations are expected to diverge from central populations as a result of the interwoven effects of isolation, genetic drift, and natural selection. Available empirical evidence suggests that peripheral populations are often genetically and morphologically divergent from central populations. The long-term conservation of species is likely to depend upon the protection of genetically distinct populations. In addition, peripheral populations are potentially important sites of future speciation events. Under some circumstances, conservation of peripheral populations may be beneficial to the protection of the evolutionary process and the environmental systems that are likely to generate future evolutionary diversity.     

Highly Differentiated Populations of the Narrow Endemic Plant Maguire Primrose (Primula maguirei)

Maguire primrose (Primula maguirei) is a geographically restricted plant species, known only from a 19-km stretch of Logan Canyon in northern Utah (U.S.A.). We examined variation at 13 isozyme loci from 25 individuals of P. maguirei at each of eight sites. At individual loci we detected no statistically significant deviations from Hardy-Weinberg proportions within sites (subpopulations). However, some loci were almost fixed for different alleles at the upper reaches of the species' range relative to populations approximately 10 km away. The total mean gene diversity among loci was 0.22, of which 55% was partitioned within subpopulations, 0.7% among subpopulations within populations (100 m spatial scale), 3% among populations separated by about 1 km, and 41% between an Upper Canyon group of populations and a Lower Canyon group (10-km scale). We detected no gametic disequilibria among loci within subpopulations (and populations). Two hypotheses are proposed to explain the results: (1) past genetic bottlenecks and (2) genetic divergence as a by-product of local adaptations to different habitats. Regardless of the causes of allozymic differentiation, our results suggest that plans for artificial establishment or reestablishment of P. maguirei populations should use source populations within 1 km of the establishment site. This study emphasizes the potential use of data on population genetic structure for managing and monitoring rare species.     

Allozyme variation in populations of the dog-whelkNucella lapillus (Prosobranchia: Muricacea) from the South West peninsula of England

Four populations of the predatory gastropodNucella lapillus were sampled at sites around the South West Peninsula of England in 1986, and analysed for allozyme variation at 18 enzyme loci. Two of these loci, Gpd-1 andHk-1, exhibited sex-specific phenotypes. An absolute locus association was observed between two other loci,Mdh-1 andEst-3. This association was only found at one site (Prawle), and it is suggested that the presence of chromosomal polymorphisms could explain this finding. As a measure of overall similarity, Nei's genetic identity statistic,I, was calculated; the mean for all populations was 0.989, with values ranging from 0.981 to 0.997. Although similar on this gross level, considerable interpopulation variation was evident. Observed mean heterozygosity (per locus) ranged from 0.043 to 0.104 (mean 0.074). Populations differed also in the loci at which significant heterozygote deficits were seen (of the seven deficits recorded only those at thePep-1 locus were consistent across sites) and in the presence of rare alleles undetected elsewhere. The variation observed showed no correlation to shell morphology or geographical distance and confirmed the conclusion that species of the genusNucella show considerable disjunct variation.     

Population structure of the widely dispersing marine bryozoan Membranipora membranacea (Cheilostomata): implications for population history, biogeography, and taxonomy

Morphologically plastic, cryptic, or geographically widespread species pose similar challenges to the evolutionary biologist: their taxonomic status is often unclear yet must be known to study almost any aspect of their biology, ecology, evolution, or biogeography. The marine bryozoan Membranipora membranacea (L.) is morphologically plastic and geographically widespread in temperate oceans of the Northern and Southern Hemispheres, and its taxonomy is unclear. This study examined genetic relationships among allopatric populations and sympatric morphs of this species, or species complex. Colonies were collected from 1992 to 1995. Allozymes were used to elucidate the relationships among four widely separated populations, two in the North Atlantic and two in the North Pacific Ocean. Allozymes and mtDNA sequencing were used to clarify the genetic relationships among three sympatric morphs that might correspond to the species M. villosa Hincks and M. membranacea in the northeastern Pacific (Washington State). Populations in the North Atlantic and North Pacific had no fixed allelic differences at the loci tested but were separated by an average Nei's genetic distance of 0.581, suggesting their near-sibling species status. Populations from Friday Harbor (Washington) and Catalina Island (California) were not significantly differentiated, which was attributed to high gene flow. Populations on either side of the North Atlantic were genetically indistinguishable, which is most likely due to the recent establishment of the West Atlantic populations from European founders. At Friday Harbor, sympatric morphs varying in their spination and spine inducibility were genetically indistinguishable, supporting the hypothesis that M. villosa is an induced phenotype of M. membranacea and not a distinct species in the northeastern Pacific. Since such phenotypic plasticity is common in cheilostome bryozoans, the morphospecies concept must be used with caution. Received: 31 August 1998 / Accepted: 10 August 1999     

Comparisons of Genetic Diversity in the Endangered Adenophora lobophylla and Its Widespread Congener, A. potaninii

Abstract: Starch-gel electrophoresis was used to examine the levels and distribution of genetic diversity in two Adenophora species: the narrow endangered Adenophora lobophylla and its widespread congener, A. potaninii . Based on allozyme variation at 18 putative loci, we measured high levels of genetic variability both in the endangered and the widespread species, with 83.3% of the loci being polymorphic. The mean expected heterozygosity within populations (   H _ep  ) and within species (   H _es  ) were 0.234 and 0.244 for A. potaninii and were as high as 0.210 and 0.211 for A. lobophylla . There was higher differentiation among populations in A. potaninii (   F _ST = 0.155) than in A. lobophylla (   F _ST = 0.071). The high levels of genetic diversity in the present allozyme survey are consistent with the morphological variation observed in these species and may be attributed to high outcrossing rates in the Adenophora species. In addition, A. lobophylla was identified as a distinct species on the basis of Nei's genetic distances and thus should be given a high priority for protection. It is noteworthy that the endangered A. lobophylla maintains much higher genetic diversity than most endemic or narrowly distributed plant species in spite of its restricted distribution. We hypothesize that A. lobophylla has become endangered for ecological and stochastic reasons, including habitat destruction or environmental changes, mud slides, and human disturbance such as grazing and mowing. Consequently, habitat protection is of particular importance for conserving this endangered species.     

Stepping-stone gene flow in the solitary coral Balanophyllia elegans: equilibrium and nonequilibrium at different spatial scales

Limited dispersal should result in genetic differences between populations proportional to geographic distances of separation. This association between gene flow and distance can be disrupted by (1) continuing genetic exchange among distant populations, (2) historical changes in gene flow, and (3) physical barriers or corridors to dispersal. The movements of larvae are thought to determine dispersal capability in benthic marine invertebrates. The solitary scleractinian Balanophyllia elegans Verrill possesses crawling larvae capable of only limited dispersal. Paradoxically, however, inferred levels of gene flow between pairs of localities spread over much of the 4000 km range of B. elegans exhibited a weaker relationship with geographical separation than that expected for a linear array of populations in which all genetic exchange takes place between adjacent populations. In this paper, I examined the pattern of gene flow (inferred from the frequencies of eight polymorphic allozyme loci) in B. elegans at a smaller (1 to 50 km) spatial scale to determine (1) whether gene flow at this spatial scale conformed to the expectations of the stepping-stone model, and (2) whether continuing long-distance gene flow or historical changes in gene flow were responsible for the weak relationship between gene flow and distance observed previously at the rangewide spatial scale. Between May and August 1992, I collected 75 adults from each of 18 localities along the coast of Sonoma County, California, USA. These populations of B. elegans were significantly subdivided both among localities separated by 1 to 50 km (F _LT =0.053, Se=0.0075) and among patches separated by 4 to 8 m (F PL=0.026, SE=0.0023). The observed slope and correlation (r ²=0.54) between inferred levels of gene flow and the geographic distance at the 1 to 50 km spatial scale conformed to equilibrium expectations (obtained by simulation) for a linear stepping-stone model, although those from the rangewide spatial scale did not. This implies that the mechanisms conferring patterns of inferred genetic differentiation between localities in B. elegans differ fundamentally with spatial scale. At a scale of 1 to 50 km, continuing gene flow and drift have equilibrated and the process of isolation-bydistance may facilitate local adaptive change. At a broader spatial scale, historical changes in gene flow, perhaps affected by late Pleistocene climatic fluctuations, disrupt the equilibration of gene flow and genetic drift, so that genetic differentiation may not increase continuously with separation between populations.     

Longitudinal monitoring of neutral and adaptive genomic diversity in a reintroduction

Restoration programs in the form of ex-situ breeding combined with reintroductions are becoming critical to counteract demographic declines and species losses. Such programs are increasingly using genetic management to improve conservation outcomes. However, the lack of long-term monitoring of genetic indicators following reintroduction prevents assessments of the trajectory and persistence of reintroduced populations. We carried out an extensive monitoring program in the wild for a threatened small-bodied fish (southern pygmy perch, Nannoperca australis) to assess the long-term genomic effects of its captive breeding and reintroduction. The species was rescued prior to its extirpation from the terminal lakes of Australia's Murray-Darling Basin, and then used for genetically informed captive breeding and reintroductions. Subsequent annual or biannual monitoring of abundance, fitness, and occupancy over a period of 11 years, combined with postreintroduction genetic sampling, revealed survival and recruitment of reintroduced fish. Genomic analyses based on data from the original wild rescued, captive born, and reintroduced cohorts revealed low inbreeding and strong maintenance of neutral and candidate adaptive genomic diversity across multiple generations. An increasing trend in the effective population size of the reintroduced population was consistent with field monitoring data in demonstrating successful re-establishment of the species. This provides a rare empirical example that the adaptive potential of a locally extinct population can be maintained during genetically informed ex-situ conservation breeding and reintroduction into the wild. Strategies to improve biodiversity restoration via ex-situ conservation should include genetic-based captive breeding and longitudinal monitoring of standing genomic variation in reintroduced populations.     

Relationship of Genetic Variation to Population Size in Wildlife

Genetic diversity is one of three levels of biological diversity requiring conservation. Genetic theory predicts that levels of genetic variation should increase with effective population size. Soulé (1976) compiled the first convincing evidence that levels of genetic variation in wildlife were related to population size, but this issue remains controversial. The hypothesis that genetic variation is related to population size leads to the following predictions: (1) genetic variation within species should be related to population size; (2) genetic variation within species should be related to island size; (3) genetic variation should be related to population size within taxonomic groups; (4) widespread species should have more genetic variation than restricted species; (5) genetic variation in animals should be negatively correlated with body size; (6) genetic variation should be negatively correlated with rate of chromosome evolution; (7) genetic variation across species should be related to population size; (8) vertebrates should have less genetic variation than invertebrates or plants; (9) island populations should have less genetic variation than mainland populations; and (10) endangered species should have less genetic variation than nonendangered species. Empirical observations support all these hypotheses. There can be no doubt that genetic variation is related to population size, as Soulé proposed. Small population size reduces the evolutionary potential of wildlife species.     

Symbiont diversity within the widespread scleractinian coral<Emphasis Type="Italic"> Plesiastrea versipora</Emphasis>, across the northwestern Pacific

The molecular diversity of symbiotic dinoflagellates associated with the widespread western Pacific coral Plesiastrea versipora was explored in order to examine if associations between reef-building corals and symbiotic dinoflagellates change with environment. Several ribosomal DNA genes with different evolutionary rates were used, including the large subunit (28S), the 5.8S region and the internal transcribed spacers (ITS). The phylogenetic analysis of the 28S and 5.8S rDNA regions indicated that a single endosymbiont species, highly related to one of the species of Symbiodinium in clade C (= Symbiodinium goreaui, Trench et Blank), associates with P. versipora along the Ryukyu Archipelago. The persistence of the same endosymbiont within P. versipora across this wide array of latitudes may be a result of such features as the Kuroshio Current, which brings tropical temperatures as far north as Honshu, Japan. Analysis of the faster evolving ITS rDNA region revealed significant genetic variability within endosymbionts from different populations. This variation was due to a high degree of interpopulation variability, based on the proportion of pairwise variation detected among the populations (0.95% approximately). By comparison with other studies, the results also indicate that some ITS1 haplotypes from P. versipora endosymbionts seem to be widely distributed within the western Pacific Ocean, ranging from the Great Barrier Reef to the northeast of the China Sea.