Parameterising competing zooplankton for survival in plankton functional type models

Marine plankton ecosystems are an important component of biogeochemical cycling in the oceans. Operational plankton functional type (PFT) models, that group plankton according to their biogeochemical properties, are currently being developed to resolve biogenic gas exchange between the ocean and atmosphere, and to model the lowest trophic levels in fisheries models. A fundamental problem with these models is that PFTs often go extinct in computer simulations, effectively removing the biogeochemical processes from the models. Cropp and Norbury [Cropp, R., Norbury, J., 2009a. Parameterizing plankton functional type models: insights from a dynamical systems perspective. J. Plankton Res. 31, 939-963] demonstrated that parameter combinations that allowed all PFTs to stay extant for all time in stable, homogeneous environments were rare in a PFT model with two competing phytoplankton and one zooplankton (NP₁P₂Z). In this paper, we examine the dynamical properties of a generic predator-predator-prey PFT model, and apply the analysis techniques developed by Cropp and Norbury to a simple example PFT model with one phytoplankton and two zooplankton (NPZ₁Z₂) in order to explore its properties and parameter space. We find that the properties of predator-predator-prey PFT systems are fundamentally different from those of predator-prey-prey PFT systems. The likelihood of parameter combinations for which all PFTs stay extant for all time in predator-predator-prey PFT systems depends critically on the process formulations used, and the properties of co-existing zooplankton (as defined by their parameter values) are quite different to those of co-existing phytoplankton.     

Effects of Pioneer Tree Species Hyperabundance on Forest Fragments in Northeastern Brazil

Abstract: Despite many studies on fragmentation of tropical forests, the extent to which plant and animal communities are altered in small, isolated forest fragments remains obscure if not controversial. We examined the hypothesis that fragmentation alters the relative abundance of tree species with different vegetative and reproductive traits. In a fragmented landscape (670 km²) of the Atlantic Forest of northeastern Brazil, we categorized 4056 trees of 182 species by leafing pattern, reproductive phenology, and morphology of seeds and fruit. We calculated relative abundance of traits in 50 1‐ha plots in three types of forest configurations: forest edges, small forest fragments (3.4–83.6 ha), and interior of the largest forest fragment (3500 ha, old growth). Although evergreen species were the most abundant across all configurations, forest edges and small fragments had more deciduous and semideciduous species than interior forest. Edges lacked supra‐annual flowering and fruiting species and had more species and stems with drupes and small seeds than small forest fragments and forest interior areas. In an ordination of species similarity and life‐history traits, the three types of configurations formed clearly segregated clusters. Furthermore, the differences in the taxonomic and functional (i.e., trait‐based) composition of tree assemblages we documented were driven primarily by the higher abundance of pioneer species in the forest edge and small forest fragments. Our work provides strong evidence that long‐term transitions in phenology and seed and fruit morphology of tree functional groups are occurring in fragmented tropical forests. Our results also suggest that edge‐induced shifts in tree assemblages of tropical forests can be larger than previously documented.     

哀牢山西坡主要植被类型的特征与物种组成

研究了云南哀牢山西坡主要植被类型的物种组成和群落生态特征,结果如下: 1)物种多样性在低山季风常阔叶林中最高; 2)乔木径级在中山湿性常绿阔叶林中最大,而乔木密度则在山顶苔藓矮林最大; 3)当取样面积达1 500m2后,各植被类型物种增加速度变得缓和. 图 4表 3参 32     

广东南部电白小良试验站4种森林群落结构的对比研究

通过对小良试验站不同类型、不同林龄的３种人工林群落（群落Ｂ：桉林；群落Ｃ：松桉混交林；群落Ｄ：阔叶混交林）与当地自然次生热带季雨林（乡土林）相比较，从群落结构的角度探讨人工恢复热带森林的可行性．结果表明：从桉林到松桉混交林到阔叶混交林，３种人工林群落的组成结构和空间结构向着复杂性和稳定性方向发展，并逐渐向地带性自然次生林方向演替；群落的相似性研究也表明，阔叶混交林是３种人工林中与乡土林最为相似．因此，对于极度退化的热带丘陵台地区，在一定工程和生物措施基础上，用先锋绿化树种造林成功后，及时用多层多种的阔叶混交林改造原有先锋林，可以加速人工林向地带性植被类型演替．     

Fragmentation drives tropical forest fragments to early successional states: A modelling study for Brazilian Atlantic forests

Land use leads to massive habitat destruction and fragmentation in tropical forests. Despite its global dimensions the effects of fragmentation on ecosystem dynamics are not well understood due to the complexity of the problem. We present a simulation analysis performed by the individual-based model FORMIND. The model was applied to the Brazilian Atlantic Forest, one of the world's biodiversity hot spots, at the Plateau of São Paulo. This study investigates the long-term effects of fragmentation processes on structure and dynamics of different sized remnant tropical forest fragments (1-100 ha) at community and plant functional type (PFT) level. We disentangle the interplay of single effects of different key fragmentation processes (edge mortality, increased mortality of large trees, local seed loss and external seed rain) using simulation experiments in a full factorial design.Our analysis reveals that particularly small forest fragments below 25 ha suffer substantial structural changes, biomass and biodiversity loss in the long term. At community level biomass is reduced up to 60%. Two thirds of the mid- and late-successional species groups, especially shade-tolerant (late successional climax) species groups are prone of extinction in small fragments. The shade-tolerant species groups were most strongly affected; its tree number was reduced more than 60% mainly by increased edge mortality. This process proved to be the most powerful of those investigated, explaining alone more than 80% of the changes observed for this group. External seed rain was able to compensate approximately 30% of the observed fragmentation effects for shade-tolerant species.Our results suggest that tropical forest fragments will suffer strong structural changes in the long term, leading to tree species impoverishment. They may reach a new equilibrium with a substantially reduced subset of the initial species pool, and are driven towards an earlier successional state. The natural regeneration potential of a landscape scattered with forest fragments appears to be limited, as external seed rain is not able to fully compensate for the observed fragmentation-induced changes. Our findings suggest basic recommendations for the management of fragmented tropical forest landscapes.     

古田山国家级自然保护区常绿阔叶林类型及其群落物种多样性研究

在群落调查的基础上，分析了古田山自然保护区常绿阔叶林的群落类型和群落物种多样性特征．结果表明：古田山自然保护区常绿阔叶林主要有6种类型(群系)，即甜槠林、栲树林、野含笑-钩栗林、青冈林、虎皮楠-甜槠林、乌冈栎-青冈林，并对各群落类型的结构和物种组成进行了描述．从各群落的外貌、结构和种类组成上看，均具有我国典型常绿阔叶林的基本特征．不同群落类型其物种多样性大小不同，栲树林和野含笑-钩栗林物种多样性较高，虎皮楠-甜槠林和乌冈栎-青冈林物种多样性较低．在群落垂直结构中，灌木层→乔木层→草本层物种多样性依次降低，乔木层与灌木层之间物种多样性差异不显著，草本层的物种丰富度、物种多样性指数均明显小于乔木层和灌木层．与邻近4个山地常绿阔叶林物种多样性相比较，古田山常绿阔叶林物种多样性比纬度位置高的黄山和大别山要大，但比纬度位置低的乌岩岭和缙云山小．     

Overlooked biodiversity loss in tropical smallholder agriculture

Smallholder agriculture is the main driver of deforestation in the western Amazon, where terrestrial biodiversity reaches its global maximum. Understanding the biodiversity value of the resulting mosaics of cultivated and secondary forest is therefore crucial for conservation planning. However, Amazonian communities are organized across multiple forest types that support distinct species assemblages, and little is known about smallholder impacts across the range of forest types that are essential for sustaining biodiversity. We addressed this issue with a large-scale field inventory of birds (point counts) and trees (transects) in primary forest and smallholder agriculture in northern Peru across 3 forest types that are key for Amazonian biodiversity. For birds smallholder agriculture supported species richness comparable to primary forest within each forest type, but biotic homogenization across forest types resulted in substantial losses of biodiversity overall. These overall losses are invisible to studies that focus solely on upland (terra firma) forest. For trees biodiversity losses in upland forests dominated the signal across all habitats combined and homogenization across habitats did not exacerbate biodiversity loss. Proximity to forest strongly predicted the persistence of forest-associated bird and tree species in the smallholder mosaic, and because intact forest is ubiquitous in our study area, our results probably represent a best-case scenario for biodiversity in Amazonian agriculture. Land-use planning inside and outside protected areas should recognize that tropical smallholder agriculture has pervasive biodiversity impacts that are not apparent in typical studies that cover a single forest type. The full range of forest types must be surveyed to accurately assess biodiversity losses, and primary forests must be protected to prevent landscape-scale biodiversity loss.     

中国癌症与土壤中钼元素的关系

利用土壤中钼元素资料 110 376个数据 ,癌死亡调查资料 7870 80例 ,研究了胃癌、食管癌、肝癌、宫颈癌、肺癌、大肠癌、白血病、鼻咽癌、乳腺癌死亡率与人群生存区土壤环境中钼元素的关系。结果表明 ,胃癌、食管癌、宫颈癌死亡率与钼元素有相关性 ,等级相关系数分别为 - 0 .4 2 4 6( P<0 .0 2 5) ,- 0 .54 53( P<0 .0 0 2 5) ,- 0 .3369( P<0 .0 5)。     

Effects of Local Disturbance of Tropical Forests on Frugivores and Seed Removal of a Small-Seeded Afrotropical Tree

Abstract:  Small-scale, local disturbance of tropical forests, for example from selective logging, is widespread, but its effects on biodiversity and ecosystem function have rarely been studied. In 3 East African tropical rainforests, we investigated the effect of different levels of local forest disturbance on the frugivore community and on tree visitation and fruit removal rates of the small-seeded tree Celtis durandii. We quantified birds and primates in little and heavily disturbed sites, distinguishing between forest specialists, forest generalists, and forest visitors. We quantified frugivorous tree visitors and seed removal rates of C. durandii trees in the same sites. Forest disturbance reduced the species richness and density of the frugivore community and of forest specialists. Frugivorous species and individuals visiting the study trees were reduced significantly, which led to a marginally significant decline in fruit removal by all frugivores and a significant reduction in removal by forest specialists. Reduction in fruit removal by forest specialists was not compensated for by increases in removal by forest generalists or visitors. Results did not differ among the 3 rainforests, which suggests they were consistent at a regional scale. So local forest disturbance led to a loss of frugivores and their seed removal services. This suggests that large-seeded tree species and trees with small fruits are losing seed dispersers. Thus, local forest disturbance appears to have a more general negative impact on frugivores and their seed dispersal services than anticipated previously.     

江苏北部城镇绿化策略研究

在对江苏北部气候，植物区系，森林植被研究的基础上，从生态学角度提出该地区城镇绿化策略，包括：立足于落叶阔叶树种，积极引种耐寒发阔叶树种，根据生境特点合理布局树种。     

鼎湖山粗死木质残体生物量特征

对鼎湖山季风常绿阔叶林1 hm2永久性样地内粗死木质残体(Coarse woody debris,简称CWD)的生物量、存在形式及分解状态进行研究.结果表明:1)鼎湖山季风常绿阔叶林CWD的生物量为42.09 t hm-2,其中倒木和枯立木分别为32.81 t hm-2、9.28 t hm-2,所占比例分别为77.9%、22.1%.1999~2010年间CWD年均输入量为1.68 t hm-2a-1.2)CWD主要优势树种为锥栗(Castanopsis chinensis)、黄杞(Engelhardtia roxburghiana)和荷木(Schima superba),所占比例分别为54.0%、15.1%和13.9%.3)CWD径级主要分布在30 cm以下,但对CWD生物量贡献最大的径级在30 cm以上.4)CWD的分解状态主要为中度分解状态,占CWD总生物量的61.2%.研究还表明,鼎湖山季风常绿阔叶林的CWD生物量呈逐年增加趋势.图2表3参17     

Resprouting as a persistence strategy of tropical forest trees: relations with carbohydrate storage and shade tolerance

Resprouting is an important persistence strategy for woody species and represents a dominant pathway of regeneration in many plant communities, with potentially large consequences for vegetation dynamics, community composition, and species coexistence. Most of our knowledge of resprouting strategies comes from fire-prone systems, but this cannot be readily applied to other systems where disturbances are less intense. In this study we evaluated sapling responses to stem snapping for 49 moist-forest species and 36 dry-forest species from two Bolivian tropical forests. To this end we compared in a field experiment the survival and height growth of clipped and control saplings for a two-year period, and related this to the shade tolerance, carbohydrate reserves, and the morphological traits (wood density, leaf size) of the species. Nearly all saplings resprouted readily after stem damage, although dry-forest species realized, on average, a better survival and growth after stem damage compared to moist-forest species. Shade-tolerant species were better at resprouting than light-demanding species in moist forest. This resprouting ability is an important prerequisite for successful regeneration in the shaded understory, where saplings frequently suffer damage from falling debris. Survival after stem damage was, surprisingly, only modestly related to stem reserves, and much more strongly related to wood density, possibly because a high wood density enables plants to resist fungi and pathogens and to reduce stem decay. Correlations between sampling performance and functional traits were similar for the two forest types, and for phylogenetically independent contrasts and for cross-species analyses. The consistency of these results suggests that tropical forest species face similar trade-offs in different sites and converge on similar sets of solutions. A high resprouting ability, as well as investments in stem defense and storage reserves, form part of a suite of co-evolved traits that underlies the growth-survival trade-off, and contributes to light gradient partitioning and species coexistence. These links with shade tolerance are important in the moist evergreen forest, which casts a deep, more persistent shade, but tend to diminish in dry deciduous forest where light is a less limiting resource.     

Conservation of Epiphyte Diversity in an Andean Landscape Transformed by Human Land Use

Abstract: Epiphytes are diverse and important elements of tropical forests, but as canopy‐dwelling organisms, they are highly vulnerable to deforestation. To assess the effect of deforestation on epiphyte diversity and the potential for epiphyte conservation in anthropogenically transformed habitats, we surveyed the epiphytic vegetation of an Ecuadorian cloud forest reserve and its surroundings. Our study was located on the western slopes of the Andes, a global center of biodiversity. We sampled vascular epiphytes of 110 study plots in a continuous primary forest; 14 primary forest fragments; isolated remnant trees in young, middle‐aged, and old pastures; and young and old secondary forests. It is the first study to include all relevant types of habitat transformation at a single study site and to compare epiphyte diversity at different temporal stages of fragmentation. Epiphyte diversity was highest in continuous primary forest, followed by forest fragments and isolated remnant trees, and lowest in young secondary forests. Spatial parameters of habitat transformation, such as fragment area, distance to the continuous primary forest, or distance to the forest edge from inside the forest, had no significant effect on epiphyte diversity. Hence, the influence of dispersal limitations appeared to be negligible or appeared to operate only over very short distances, whereas microclimatic edge effects acted only in the case of completely isolated trees, but not in larger forest fragments. Epiphyte diversity increased considerably with age of secondary forests, but species assemblages on isolated remnant trees were impoverished distinctly with time since isolation. Thus, isolated trees may serve for recolonization of secondary forests, but only for a relatively short time. We therefore suggest that the conservation of even small patches of primary forest within agricultural landscape matrices is essential for the long‐term maintenance of the high epiphyte diversity in tropical cloud forests.     

Common ectomycorrhizal networks may maintain monodominance in a tropical rain forest

Most tropical rain forests contain diverse arrays of tree species that form arbuscular mycorrhizae. In contrast, the less common monodominant rain forests, in which one tree species comprises more than 50% of the canopy, frequently contain ectomycorrhizal (ECM) associates. In this study, I explored the potential for common ECM networks, created by aggregations of ECM trees, to enhance seedling survivorship near parent trees. I determined the benefit conferred by the common ECM network on seedling growth and survivorship of an ECM monodominant species in Guyana. Seedlings with access to an ECM network had greater growth (73% greater), leaf number (55% more), and survivorship (47% greater) than seedlings without such access, suggesting that the ECM network provides a survivorship advantage. A survey of wild seedlings showed positive distance-dependent distribution and survival with respect to conspecific adults. These experimental and survey results suggest that the negative distance-dependent mechanisms at the seedling stage thought to maintain tropical rain forest diversity are reversed for ECM seedlings, which experience positive feedbacks from the ECM network. These results may in part explain the local monodominance of an ECM tree species within the matrix of high-diversity, tropical rain forest.     

祁连山北坡自然恢复杨桦林地植物功能型组成及其影响因素

依据生活型(乔木、藤本、灌木、半灌木、多年生禾草、多年生杂类草和一二年生草本)和水分生态型(旱生、旱中生、中生和湿生)将祁连山北坡次生杨桦林28个调查样地中的81个物种划分为18种植物功能型(Plant functiontypes,PFTs),并通过典范对应分析(CCA)方法研究植物功能型与环境因子间的关系.结果表明:自然恢复杨桦林地植物功能型主要集中在中生多年生杂类草(PFTs16)、湿生多年生杂类草(PFTs23)、旱中生多年生杂类草(PFTs9)和中生灌木(PFTs18)4个植物功能型上;乔、灌、草三层冠层特征和中生植物的大量出现,反映了群落植物生活型趋于复杂化和结构化,生态型逐渐向中生化方向演替的特点;土壤容重、有机碳和全氮含量主要影响植物的生活型分异特征,土壤含水量和林冠郁闭度是植物的水分生态型分异的主要环境因子,而坡位、坡度控制着群落植物总体分布格局的形成.图1表3参31     

Interactions among Frugivores and Fleshy Fruit Trees in a Philippine Submontane Rainforest

Abstract: We assessed the potential effect of frugivore extinctions on forest regeneration in the North Negros Forest Reserve, a forest fragment that is one of the last remaining wet tropical rainforest ecosystems in the biogeographic region of the central Philippine Islands. We evaluated foraging observations of 19 species of birds, fruit bats, and other mammals in three successional habitats and identified tree species that are potentially at risk because their seeds are dispersed by frugivores that are seriously endangered. The relative abundance of zoochorous trees in this forest community was exceptionally high (80%), suggesting that the process of forest regeneration will change drastically if endangered frugivores are hunted to extinction. We grouped 45 tree species as early-, mid-, or late-successional species based on their population structure and we demonstrated that early-successional tree species were visited by a wide spectrum of frugivores, whereas mid- and late-successional species were visited mostly by hornbills (Bucerotidae) and fruit pigeons (Columbidae). Late-successional tree species were most specialized with respect to dispersers and could therefore be susceptible to extinction. We recommend tree species that could be useful for assisted natural regeneration projects in the reserve because they are visited by a variety of frugivores. Of those, we recommend early-successional trees for open-field plantations and mid-successional tree species for enrichment plantings.     

Predicting leaf physiology from simple plant and climate attributes: a global GLOPNET analysis.

Knowledge of leaf chemistry, physiology, and life span is essential for global vegetation modeling, but such data are scarce or lacking for some regions, especially in developing countries. Here we use data from 2021 species at 175 sites around the world from the GLOPNET compilation to show that key physiological traits that are difficult to measure (such as photosynthetic capacity) can be predicted from simple qualitative plant characteristics, climate information, easily measured ("soft") leaf traits, or all of these in combination. The qualitative plant functional type (PFT) attributes examined are phylogeny (angiosperm or gymnosperm), growth form (grass, herb, shrub, or tree), and leaf phenology (deciduous vs. evergreen). These three PFT attributes explain between one-third and two-thirds of the variation in each of five quantitative leaf ecophysiological traits: specific leaf area (SLA), leaf life span, mass-based net photosynthetic capacity (Amass), nitrogen content (N(mass)), and phosphorus content (P(mass)). Alternatively, the combination of four simple, widely available climate metrics (mean annual temperature, mean annual precipitation, mean vapor pressure deficit, and solar irradiance) explain only 5-20% of the variation in those same five leaf traits. Adding the climate metrics to the qualitative PFTs as independent factors in the model increases explanatory power by 3-11% for the five traits. If a single easily measured leaf trait (SLA) is also included in the model along with qualitative plant traits and climate metrics, an additional 5-25% of the variation in the other four other leaf traits is explained, with the models accounting for 62%, 65%, 66%, and 73% of global variation in N(mass), P(mass), A(mass), and leaf life span, respectively. Given the wide availability of the summary climate data and qualitative PFT data used in these analyses, they could be used to explain roughly half of global variation in the less accessible leaf traits (A(mass), leaf life span, N(mass), P(mass)); this can be augmented to two-thirds of all variation if climatic and PFT data are used in combination with the readily measured trait SLA. This shows encouraging possibilities of progress in developing general predictive equations for macro-ecology, global scaling, and global modeling.     

Persistence of Forest Birds in the Costa Rican Agricultural Countryside

Abstract:  Understanding the persistence mechanisms of tropical forest species in human-dominated landscapes is a fundamental challenge of tropical ecology and conservation. Many species, including more than half of Costa Rica's native land birds, use mostly deforested agricultural countryside, but how they do so is poorly known. Do they commute regularly to forest or can some species survive in this human-dominated landscape year-round? Using radiotelemetry, we detailed the habitat use, movement, foraging, and nesting patterns of three bird species, Catharus aurantiirostris , Tangara icterocephala , and Turdus assimilis , by obtaining 8101 locations from 156 individuals. We chose forest birds that varied in their vulnerability to deforestation and were representative of the species found both in forest and human-dominated landscapes. Our study species did not commute from extensive forest; rather, they fed and bred in the agricultural countryside. Nevertheless, T. icterocephala and T. assimilis , which are more habitat sensitive, were highly dependent on the remaining trees. Although trees constituted only 11% of land cover, these birds spent 69% to 85% of their time in them. Breeding success of C. aurantiirostris and T. icterocephala in deforested habitats was not different than in forest remnants, where T. assimilis experienced reduced breeding success. Although this suggests an ecological trap for T. assimilis , higher fledgling survival in forest remnants may make up for lower productivity. Tropical countryside has high potential conservation value, which can be enhanced with even modest increases in tree cover. Our findings have applicability to many human-dominated tropical areas that have the potential to conserve substantial biodiversity if appropriate restoration measures are taken.     

Ethnobotany of Woody Species in Second-Growth, Old-Growth, and Selectively Logged Forests of Northeastern Costa Rica

Abstract: We assessed quantitatively the woody species used for timber, medicine, and other products in 10 tropical wet-forest stands with different land-use histories in the Atlantic lowlands of northeastern Costa Rica. Species were classified into 20 use categories based on regional ethnobotanical studies. Three size classes of woody vegetation were sampled in nested, contiguous plots along transects: trees (≥5 cm diameter at breast height [dbh]), saplings (>1 m high, <5 cm dbh), and seedlings (>20 cm high, <1 m high). Our study included five second-growth stands, three old-growth stands, and two selectively logged stands. Of the 459 woody species surveyed, 70% of the species and 86% of the total number of individuals had at least one use. Overall, species richness was highest for medicinal species (167 species). Absolute and relative abundance of medicinal and timber trees was significantly higher in second-growth stands than in old-growth and selectively logged stands. For 8 of the 15 use categories examined statistically, stem density showed no significant differences across forest types for any stem size class. Young, tropical, second-growth forests and selectively logged forests have high utilitarian as well as conservation value and will likely become important sources of forest products. The success of secondary forest regeneration, however, depends critically upon conservation of genetically diverse source populations in forest fragments and protected old-growth stands.     

Carbohydrate storage and light requirements of tropical moist and dry forest tree species

In many plant communities, there is a negative interspecific correlation between relative growth rates and survival of juveniles. This negative correlation is most likely caused by a trade-off between carbon allocation to growth vs. allocation to defense and storage. Nonstructural carbohydrates (NSC) stored in stems allow plants to overcome periods of stress and should enhance survival. In order to assess how species differ in carbohydrate storage in relation to juvenile light requirements, growth, and survival, we quantified NSC concentrations and pool sizes in sapling stems of 85 woody species in moist semi-evergreen and dry deciduous tropical forests in the rainy season in Bolivia. Moist forest species averaged higher NSC concentrations than dry forest species. Carbohydrate concentrations and pool sizes decreased with the light requirements of juveniles of the species in the moist forest but not in the dry forest. Combined, these results suggest that storage is especially important for species that regenerate in persistently shady habitats, as in the understory of moist evergreen forests. For moist forest species, sapling survival rates increased with NSC concentrations and pool sizes while growth rates declined with the NSC concentrations and pool sizes. No relationships were found for dry forest species. Carbon allocation to storage contributes to the growth-survival trade-off through its positive effect on survival. And, a continuum in carbon storage strategies contributes to a continuum in light requirements among species. The link between storage and light requirements is especially strong in moist evergreen forest where species sort out along a light gradient, but disappears in dry deciduous forest where light is a less limiting resource and species sort out along drought and fire gradients.