Characterization and catabolic genes detection of three oil-degrading Rhodococcus spp.北大核心CSCD

Oil pollution is one of the major factors causing environmental deterioration. Bioremediation of oil contaminated environments by microorganisms attracts much research attention. This study aimed to screen efficient oil-degrading bacteria from oil contaminated soil and analyze their characteristics and catabolic genes. Oil-degrading bacteria were screened from oil contaminated soil in minimal medium containing crude oil and identified by morphological, physiological and biochemical characteristics and 16S rDNA sequence analysis. Their growth and degradation characteristics were studied with ultraviolet spectroscopy and GC-MS analysis. The surfactant production was studied by adopting culture method. The major oil-degrading related genes were detected by t he PCR a mplification. As a result, t hree oil-degrading bacteria strains named KB1, 2182 and JC3-47 were isolated from the oil contaminated soil samples. The strains could use crude oil as the sole carbon source to degrade oil with a degrading rate of 41.02%, 32.26% and 55.90%, respectively, when cultured in minimal medium containing crude oil for 3 days. The bacteria were identified to belong to genus Rhodococcus. With 100% similarity of 16S rDNA sequences of the three strains with known ones of Rhodococcus, KB1 was preliminarily identified as Rhodococcus erythropolis, 2182 as Rhodococcus equi, and JC3-47 as Rhodococcus qingshengii. They grew well at 10-50 °C, with the initial pH of 3-9 and the NaCl concentration of 0-5%. The optimal temperature for bacterial growth was 35 °C, 35 °C and 30 °C respectively. KB1 and 2182 could grow at pH 2 and 9.0% of NaCl. The bacteria grew well in broth containing different organic substrates as sole carbon source, such as n-dodecane, n-octadecane, benzene, methylbenzene, xylene and naphthaline. KB1 and JC3-47 could grow well in broth containing pyrene. GC-MS analysis revealed that the bacteria could effectively degrade medium- and long-chain alkane components in crude oil. The bacteria produced biosurfactants and decreased the surface tension of the culture broth. They also showed adhesion activities to n-hexadecane. The oil-degrading related genes such as alkane monooxygenase, aromatic-ring-hydroxylating dioxygenase and catechol dioxygenase genes were detected in all the three strains. Besides, biphenyl dioxygenase genes were detected in KB1 and 2182. The isolated Rhodococcus spp. strains could effectively degrade petroleum hydrocarbons with high adaptabilities to extreme environments such as high salt and low temperature. They are supposed to be applied broadly in the bioremediation of oil contaminated soil in such environments.     

Migration behavior and in-situ bioremediation of chlorinated hydrocarbon solvent in vadose zone: a review北大核心CSCD

It is of great significance for in-situ bioremediation to clarify the migration behavior and biodegradation laws of chlorinated hydrocarbon solvents (CHS) in the vadose zone. We systematically summarized the phase distribution of CHS, the interaction between different phases, and the migration characteristics and clarified the evolution rules of CHS under different phases in the polluted vadose zone. CHS exists in the vadose zone as the NAPL, dissolved phase, adsorbed phase, gas phase, and other phases, where there are three decay evolution stages: early, middle, and late stages. Phase change and diffusion matrix size are important indicators at different stages; at the same time, gas, solid, liquid and NAPL phase CHS have a variety of interactive relationships in the vadose zone. Subsequently, the characteristics of the three main biological metabolic pathways of CHS in the vadose zone–aerobic co-metabolism, direct oxidation and anaerobic reduction, and dechlorination–and their influencing factors were summarized. Generally speaking, the anaerobic dechlorination capacity decreases with a decrease in the number of chlorine atoms, whereas the aerobic degradation capacity increases with a decrease in the number of chlorine atoms. The current status of in-situ remediation of CHS in the vadose zone was summarized using biostimulation and bioaugmentation methods, indicating that adding nutrient substances and injecting anaerobic dechlorination strains of Dehalococcoides are effective means of remediation. Simultaneously, the factors influencing the biodegradation of CHS in the vadose zone were elaborated to acquire a systematic insight into the significance of redox characteristics (oxygen) on the degradation of CHS. Finally, research on the biodegradation of CHS in the vadose zone is prospected, and it is necessary to carry out research on the interactive relationship between different phases of CHS, the data monitoring of CHS, the structure of the functional bacterial community, and research and development of active strains to provide theoretical guidance for the in-situ remediation of CHS in the vadose zone. © 2022 Science Press. All rights reserved.     

Protective effect of exogenous nitric oxide and salicylic acid on the photosynthetic apparatus of tomato seedling leaves under NaCl stress北大核心CSCD

Using the tomato variety 'Qin Feng Bao Guan' as experimental material, and by the hydroponics nutrient solution method, we investigated the effects of single and compound applications of nitric oxide (NO) donor sodium nitroprusside (SNP) and salicylic acid (SA) on the gas exchange and chlorophyll fluorescence parameters, RuBisCO activation, CO2 response curve, photosynthetic pigment content, and xanthophyll cycle in seedling leaves under an NaCl stress of 100 mmol/L. The main findings were as follows: (1) Single or combined applications of SNP and SA could increase the net photosynthetic rate (Pn), stomatal conductance (Gs), PS II maximal photochemistry efficiency (Fv/Fm), antenna conversion efficiency (Fv'/Fm'), practical photochemical efficiency (φPS?), photochemical fluorescence quenching coefficient (qP), and chlorophyll fluorescence decay rate (Rfd) of tomato seedling leaves at different rates, and significantly reduce the intercellular CO2 concentration (Ci), original fluorescence (Fo), and PS II non-photochemical fluorescence quenching coefficient (NPQ), after NaCl stress treatment. The strongest effect was observed after applying a combination of SNP and SA. (2) Under NaCl stress, the decrease of CO2 carboxylation efficiency (CE), RuBP maximum regeneration rate (Jmax), RuBisCO and its activation enzyme activity, and the maximum carboxylation rate (Vc max) in tomato seedling leaves could be effectively relieved by SNP, SA, or SNP + SA applications; however, SNP + SA treatment had the strongest effect. (3) Single or combined applications of SNP and SA could effectively inhibit the decrease of the contents of photosynthetic pigments (chlorophyll a, chlorophyll b, and carotenoids), the ratio of chlorophyll a and chlorophyll b, xanthophyll cycle pool size (V + A + Z), and the increase of the de-epoxidation extent of the xanthophyll cycle (A + Z)/(V + A + Z). The combined application of SNP and SA had the most prominent effect. In conclusion, the heat dissipation of the antenna, which is dependent on the xanthophyll cycle, is not the physiological mechanism for the protection of the photosynthetic apparatus by exogenous NO, SA alone, or compound treatment in tomato seedling leaves under NaCl stress. It is the main reason for the increase of photosynthetic function and enhanced salt tolerance of leaves tomato seedlings that the protection of PS II and its primary electron acceptor quinone (QA) downstream electron transfer patency, and the improvement of CO2 assimilation activity by application of exogenous NO, SA alone, or a combination of the two; synergistic effects were observed after using a combination of SNP and SA. © 2018 Science Press. All rights reserved.     

Dechlorination of 2,2＇,4,4＇,5,5＇-hexachlorobiphenyl by thermal reaction with activated carbon-supported copper or zinc

Activated carbon （AC）-supported copper or zinc made from ion exchange resin （IRCu-C and IRZn-C） have an increased metal load of 557.3 mg·g^-1 and 502.8 mg·g^-1 compared to those prepared by the traditional method involving impregnation with AC and copper （II） citrate or zinc citrate solution （LaCu-C and LaZn-C） of 12.9 mg·g^-1 and 46.0 mg·g^-1 respectively. When applied to decompose 2,2＇,4,4＇,5,5＇-hexachlorobiphenyl at 250 ℃, IRCu-C achieved higher activity of 99.0% decomposition efficiency than LaCu-C of 84.7%, IRZn-C of 90.5% and LaZn-C of 62.7%. When the reaction temperature rose to 350 ℃, all the four kinds of reactants can decompose PCB- 153 with efficiency above 90%. Further, X-ray photoelec- tron spectroscopy characterization of IRCu-C before and after the reaction indicated transformation of 19.1% of Cu atoms into Cu^2＋, illustrating that Cu is the active ingredient or electron donor promoting the decomposition of PCB- 153. The mechanism underlying this process differs from a traditional H donor. However, there is no significant change on the surface of IRZn-C before and after the reaction, suggesting that Zn acts as catalyst during the process of PCB-153 decomposition.     

Isolation,identification, and the degradation characteristics of a BDE-47 degrading strain北大核心CSCD

In an effort to remove BDE-47 residues from the environment, a bacterial strain that is capable of utilizing BDE-47 as the sole carbon source was isolated and screened from soil collected from an e-waste recycling area in Tianjin to analyze the degradation properties. The strain was preliminarily identified as Enterobacter sp. according to a 16S rDNA gene sequence analysis. The strain degraded 35.8% of 525 μg/L of BDE-47 in 35 d when the initial concentration of bacteria was 7.1 × 105 cells/ mL. The product of the biodegradation of BDE-47 was BDE-28. The biodegradation of BDE-47 fit well with first-order kinetics, and its degradation kinetics was ln Ct = - 0.104t + 6.22. With the addition of an electron acceptor, such as Fe3+, SO4 2- and NO3 -, the BDE-47 degradation rate was significantly increased to 49.8%, 59.1%, and 67.3%, respectively. The above results revealed that the strain could degrade BDE-47, which is of importance in the application of environmental bioremediation of BDE-47. © 2018 Science Press. All rights reserved.     

水生细菌对原生动物的反捕食对策

The research progress in the defense strategies of aquatic bacteria to protozoa was reviewed in this paper, Aquatic bacteria can reduce or avoid grazing mortality from protozoa through changing size or shape, reducing cell surface hydrophobieity, reducing mobility or searching refuges. It is the main trends of the field in the future to study the coevolution mode of aquatic bacteria and protozoa. Ref 47     

Genotoxic Effect of Phenol on the Cells of Onion (Allium cepa) Roots

The roots of onion (Allium cepa) stand out for having cells with large size and small number of chromosomes.These characteristics make them useful in bioassays for the measurement of a variety of cytogenetic and morphological parameters , in which they can be used as toxicity indicators of the induction and formation of micronuclei and chromosomal aberrations.Based on this background , the potential genotoxic effect of phenol concentration on cells of A.ceparoots was investigated either in terms of induced aberrations or micronuclei formation.The results demonstrated that the higher the concentration of phenol , the higher the incidence of abnormalities , thus confirming the genotoxicity of this pollutant.     

Detailed analysis of PCBs and PCDD/Fs impurities in a dielectric oil sample （ASKAREL Nr 1740） from an imported transformer in China

Homolog and congener profiles of polychlori- nated biphenyls （PCBs）, polychlorinated dibenzo-p- dioxins （PCDDs） and polychlorinated dibenzofurans （PCDFs） in commercial PCBs formulations are useful information for the source appointment of PCBs contam- ination as well as the risk assessment caused by potential exposure. Dielectric oil （ASKAREL Nr 1740） in an imported transformer found in China was sampled and analyzed by isotope dilution technology using high resolution gas chromatography-high resolution mass spectrometry （HRGC/HRMS）. The detailed homolog and congener profiles of PCBs obtained were compared with those of known Aroclor formulations. High similarity in the homolog profile between the oil sample and Aroclor 1260was found, with the hexachlorinated and hepta- chlorinated biphenyls accounting for more than 80.2% of the total PCBs concentration. Severn indicator PCBs contribute about 30%, while 12 PCB congeners （i.e., # 153, #143, #168, #180, #149, #165, #138, #170, #190, #187, #174, #181） account for more than 50% of the total PCB concentrations. Total concentration ofPCDDs, PCDFs and dioxin-like PCBs （DL-PCBs） was found to be 740 ng TEQ/g, of which 620 ng TEQ/g came from DL-PCBs. The contribution of PCDDs to the total TEQ was neglectable. The concentration of PCDFs homologs follows the order of OCDF 〉 HxCDFs 〉 HpCDFs 〉 PeCDFs 〉 TeCDFs, which is in consistence with the previous study on Aroclor 1260. Three DL-PCBs congeners （i.e., #118, #156, #157） accounted for 77% of the total concentration of DL-PCBs, also they contribute 72% in the TEQ caused by DL-PCBs.     

Impacts of surfactants on the ecotoxicological effects of TiO2-NP and/or Cd contamination in sediments北大核心CSCD

Surfactants may alter the interaction between engineered nanoparticles (ENP) and coexisting pollutants, and further influence the ecotoxicity of these pollutants. This research aimed to evaluate the impacts of the surfactant sodium dodecyl benzene sulfonate (SDS) on the ecotoxicological effects of TiO2-NP and Cd combined contamination in freshwater sediments by deposit-feeding gastropoda Bellamya aeroginosa. We investigated the effects of TiO2-NP and/or Cd contamination in the presence of different concentrations of SDS on DNA damage, Na+, K+-ATPase activities, malondialdehyde (MDA) levels, and protein carbonyl (PCO) levels in the hepatopancreas of B. aeroginosa following 21-d chronic sediment bioassay. The results showed that low concentration (5 μg g-1) of Cd had no toxicity to B. aeroginosa, while relatively high concentration (25 μg g-1) displayed obvious toxicity, and that SDS could significantly enhance the toxicity of Cd to B. aeroginosa. TiO2-NP with nontoxic concentration could enhance the toxicity of Cd with low concentration to B. aeroginosa, but had no effects on the toxicity of Cd with high concentration. SDS could significantly enhance the toxicity of TiO2-NP and Cd combined contamination to B. aeroginosa in a SDS-concentration-dependent manner. When assessing the potential environmental risk of ENP, we should not only focus on the toxicity of ENP itself, or the interaction between ENP and coexisting contaminants, but also should consider the potential impacts of surfactants and other environmental factors.     

Dynamic characteristics of woody plant regeneration in karst secondary forests in central Guizhou北大核心CSCD

Based on community data (2012, 2020) of the Tianlong Mountain evergreen and deciduous broadleaved mixed forest plot in central Guizhou, China, the species composition, importance value index, diversity, and dynamic changes were estimated to explore the renewal and change characteristics of karst secondary forests. The results showed that: (1) the number of individual species in the investigated two hm2 plot encompassing 33 families and 55 genera, totaling 69 species decreased from 10 276 to 7837. Five families, 10 genera, and 18 species were newly added, while seven families, nine genera, and 11 species disappeared. The difference between the importance value indices of the species was obvious; that of Lithocarpus confinis (20.97–23.26) was much higher than that of other species. Except for some species, the overall inter-annual differences were not large, and the status of mesophytic and shaded species has increased. Life forms were dominated by small trees and shrubs or small trees, and the plant number density of different life forms is reduced. (2) The Margalef and Shannon-Wiener indices of shrubs were the largest, and the Pielou indices of shrubs or small trees were the largest. The composition of most life forms has increased; the diversity became richer; and the uniform distribution of individual species has increased, but the change was small. (3) With respect to the spatial distribution pattern, the species were generally clustered, and only a few were randomly distributed. The Cx, I, m*, CA, and G indices of the species were reduced, and those of some species were quite different. A tendency for aggregated distribution was observed over random distribution, but the aggregation degree of Lithocarpus sphaerocephala was still high. The PAI index of most species increased but was not obvious, whereas the K value changed irregularly. Overall, the species composition, importance value index, diversity, and spatial distribution pattern of the main species in this community have changed to some extent but without any significant fluctuations. L. sphaerocephala was still the dominant species in succession, and the species composition of the flora was stable. The restoration of vegetation and the development of the entire community are slow. © 2022 Science Press. All rights reserved.     

Toxic Effect of a Pesticide, Diflubenzuron on Freshwater Microinvertebrate (Tetrahymena pyriformis)

Harmful bugs affect food production,directly by the qualitativeor quantitative reduction of the harvests,or indirectly while servinglike vectors of several illnesses of the plants and human[1].Many chemical products are used by human for a long time inthe…     

Simultaneous removal of arsenate and fluoride from water by AI-Fe （hydr）oxides

A1-Fe （hydr）oxides with different A1/Fe molar ratios （4：1, 1：1, 1：4, 0：1） were prepared using a co- precipitation method and were then employed for simultaneous removal of arsenate and fluoride. The 4A1 ： Fe was superior to other adsorbents for removal of arsenate and fluoride in the pH range of 5.0-9.0. The adsorption capacity of the A1-Fe （hydr）oxides for arsenate and fluoride at pH 6.50.3 increased with increasing A1 content in the adsorbents. The linear relationship between the amount of OH released from the adsorbent and the amount of arsenate or fluoride adsorbent by 4A1 ： Fe indicated that the adsorption of arsenate and fluoride by A1- Fe （hydr）oxides was realized primarily through quantita- tive ligand exchange. Moreover, there was a very good correlation between the surface hydroxyl group densities of A1-Fe （hydr）oxides and their adsorption capacities for arsenate or fluoride. The highest adsorption capacity for arsenate and fluoride by 4A1 ： Fe is mainly ascribed to its highest surface hydroxyl group density besides its largest pHpzc. The dosage of adsorbent necessary to remove arsenate and fluoride to meet the drinking water standard was mainly determined by the presence of fluoride since fluoride was generally present in groundwater at much higher concentration than arsenate.     

Research progress on hydrothermal dissolution and hydrolysis of lignocellulose and lignocellulosic waste

Ethanol production from lignocellulosic waste has attracted considerable attention because of its feasi- bility and the generation of valuable products. Previous studies have shown that pretreatment and hydrolysis are key processes for lignocellulose conversion. Hydrothermal process is a promising technique because of its efficiency to break down the lignocellulosic structures and produce fermentable hexoses. Most studies in this field have therefore focused on understanding these processes or optimizing the parameters, but commonly reported low yields of fermentable hexoses. The inability to produce high yields of fermentable hexoses is mainly attributed to inadequate information on the conversion mechanisms of lignocellulose, particularly the reaction rules of dissolu- tion, which is a limiting step in the entire conversion process. This paper critically reviewed the progress done in the research and development of the hydrothermal dissolution and hydrolysis of lignocellulose. Principles, processes, and related studies on separate dissolution and asynchronous hydrolysis of lignin, hemieellulose, and cellulose are presented. Potential research prospects are also suggested.     

Role of biologic components in a novel floating-bed combining Ipomoea aquatic,Corbicula fluminea and biofilm carrier media

A novel floating-bed incorporated with water spinach （Ipomoea aquatica）, Asiatic clam （Corbicula fluminea）, and carrier media supported biofilm was developed for eutrophic water purification. The contribu- tions of each biologic component to the removals of total nitrogen （TN）, total phosphorus （TP） and Chl.a were examined. The nutrient removals due to the direct uptake by either water spinach or Asiatic clam were less than 10%, suggesting a negligible role of biologic assimilation and leaving the biofilm as the indispensable biologic compo- nent in the floating-bed. Chl.a was reduced mainly by Asiatic clams via filter-feeding. Meanwhile, the digestion and excretion of Asiatic clams benefited the proliferation of nitrifying and denitrifying bacteria, resulting in the improvement of TN removal. In summary, the synergetic effects of water spinach, Asiatic clams and biofilms would promote the eutrophic water treatment performance of floating-bed in comparison with the conventional floating- bed with vegetation as the single biologic component.     

Structure and function of the eversible glands of the aquatic firefly <Emphasis Type="Italic">Luciola leii</Emphasis> (Coleoptera: Lampyridae)

Summary. When attacked or otherwise disturbed, larvae of the aquatic firefly Luciola leii display fork-shaped glands laterally from the meso- and metathorax as well as each abdominal segment. Glandular eversion is accompanied by a strong pine oil-like odour, thanatosis and glowing from paired larval light organs. Observations by SEM and TEM revealed that there are numerous, almost spherical protuberances, measuring 9 μm in diameter on the surface of each gland. Each protuberance is connected to a well developed secretory cell via a 0.1 μm thick and 0.2 μm long stalk and bears three to six 7 μm long spines on its apex. The convoluted glandular walls measure 0.2 μm. The cytoplasm of the secretory cells is characterized by the presence of numerous mitochondria and an extensive system of cisternae and tubular endoplasmic reticulum. Preliminary GC-MS analysis of the glandular secretion revealed two volatile terpenoids: terpinolene and γ-terpinene. Choice and no-choice bioassays involving fish and ants as well as other predators demonstrate that the secretions serve as an effective deterrent against a range of ecologically relevant enemies. The larval postural adjustments, light emission, everted glands, and glandular release of distasteful or repellent compounds, appear to function as a multi-modal, aposematic larval defence. The tandem evolution of glandular secretions and conspicuousness in larval fireflies could partially explain their successful radiation into both aquatic and terrestrial habitats.     

Comprehensive health condition assessment on partial sewers in a southern Chinese city based on fuzzy mathematic methods

A self-developed sewer health assessment system using the fuzzy comprehensive evaluation and analytical hierarchy process was applied to give a comprehensive health condition evaluation on part of the local sewers in a southern Chinese city based on the sewer video data collected by a sewer inspection closed circuit television （CCTV） robot. Aside from the overall condition evaluation, the structure, function, and stability status of the sewer were also analyzed using the method. A comprehensive index H was proposed to give the overall health condition of pipes with different defects, and Ht, Hs, and If were used to quantify the defects affecting the tightness, stability, and function of the pipe, respectively. Results show that 48% of the inspected pipes were in good condition （0〈H〈0.25）, and about 33% of the sewer pipes analyzed were categorized to be at severe or urgent condition levels （H 〉 0.5）, although most of the pipes were installed only within five years. Frequent sedimentation affects the function of the sewer, and deformation and joint damage affect the structure of the sewer.     

Telling Duckweed Apart:Genotyping Technologies for the Lemnaceae

The family of Lemnaceae,commonly called duckweed,comprise five genera and 37 species of aquaticmonocotyledonous plants that are endemic to lakes,ponds and brackish water bodies on most continents. They are angiospermsthat have the highest biomass production rate and have been used to remediate wastewater from both municipal andindustrial sources. With these attractive features,duckweed is poised to be a novel agricultural platform that can complementcurrent terrestrial crops. In addition,their remarkable ability to adapt to diverse climates and conditions may provide newunderstanding of stress tolerance and genome adaptability mechanisms. However,one of the first challenges facing theseapplications is to establish reliable and rapid methods for identification of closely related strains that may have very differentbehaviour or properties. This review article summarizes the state of the arts for this endeavour and provides the outlook for thisquest in the near future.     

Removal of pharmaceutical and personal care products by sequential ultraviolet and ozonation process in a full-scale wastewater treatment plant

The application of appropriate advanced treat- ment process in the municipal wastewater treatment plants （WWTPs） has become an important issue considering the elimination of emerging contaminants, such as pharma- ceutical and personal care products （PPCPs）. In the present study, the removal of 13 PPCPs belonging to different therapeutic classes by the sequential ultraviolet （UV） and ozonation process in a full-scale WWTP in Beijing was investigated over the course of ten months. Most of the target PPCPs were effectively removed, and the median removal efficiencies of individual PPCPs, ranging from -13% to 89%, were dependent on their reaction rate constants with molecular ozone. Noticeable fluctuation in the removal efficiencies of the same PPCPs was observed in different sampling campaigns. Nevertheless, the sequential UV and ozonation process still made a significant contribution to the total elimination of most PPCPs in the full-scale WWTP, by compensating for the poor or fluctuant removal performance of PPCPs by biologic treatment process.     

Membrane Fouling in Microfiltration of Sanitary Landfill Leachate for Removals of Colourand Solids

In this research,the treatability of solids from sanitary landfill leachate by microfiltration membrane was investigated and the fouling of the membrane was carefully studied.Continuous microfiltration process was carried out for 21 h in experimental system involved coagulation with Moringa oleifera followed by filtration using submerged hollow fibre microfiltration membrane (MFM).Coagulation with M.Oleifera,air diffusers and back flush technique were used for preventing or alleviating fouling of the membrane.The hollow fibre MFM showed high removals of 98%,91% and 99% for turbidity,colour and total suspended solids respectively.It was obtained at the beginning of the filtration.However,quality of the filtrate rapidly declined during the filtration process.Fouling was found to proceed according to the classical cake filtration model.Coagulation with M.Oleifera as well as the back-flush technique could not fully restore the deterioration occurred to the membrane.