Conservation of Marine Megafauna through Minimization of Fisheries Bycatch

Abstract: Many populations of marine megafauna, including seabirds, sea turtles, marine mammals, and elasmobranchs, have declined in recent decades due largely to anthropogenic mortality. To successfully conserve these long‐lived animals, efforts must be prioritized according to feasibility and the degree to which they address threats with the highest relative impacts on population dynamics. Recently, Wilcox and Donlan (2007, Frontiers in Ecology and the Environment) and Donlan and Wilcox (2008, Biological Invasions) proposed a conservation strategy of “compensatory mitigation” in which fishing industries offset bycatch of seabirds and sea turtles by funding eradication of invasive mammalian predators from the terrestrial reproductive sites of these marine animals . Although this is a creative and conceptually compelling approach, we find it flawed as a conservation tool because it has narrow applicability among marine megafauna, it does not address the most pervasive threats to marine megafauna, and it is logistically and financially infeasible. Invasive predator eradication does not adequately offset the most pressing threat to most marine megafauna populations—fisheries bycatch. For seabird populations, fisheries bycatch and invasive predators infrequently are overlapping threats. Invasive predators have limited population‐level impacts on sea turtles and marine mammals and no impacts on elasmobranchs, all of which are threatened by bycatch. Implementing compensatory mitigation in marine fisheries is unrealistic due to inadequate monitoring, control, and surveillance in the majority of fleets. Therefore, offsetting fisheries bycatch with eradication of invasive predators would be less likely to reverse population declines than reducing bycatch. We recommend that efforts to mitigate bycatch in marine capture fisheries should address multiple threats to sensitive bycatch species groups, but these efforts should first institute proven bycatch avoidance and reduction methods before considering compensatory mitigation.     

Chemical defense in the eggs and embryos of antarctic sea stars (Echinodermata)

Fifteen species of reproductively mature echinoderms (11 sea stars, 3 sea urchins, 1 sea cucumber) were collected from McMurdo Sound, Antarctica, during austral spring and summer of 1985 and 1986; eggs and embryos were obtained, and were tested for ichthyonoxicity using the common marine killifishFundulus grandis as a model predator. Chemical deterrents occurred in the large, yolky eggs of the pelagic lecithotrophic sea starPerknaster fuscus and the planktotrophic sea starPorania antarctica. Brooded embryos of the sea starsDiplasterias brucei andNotasterias armata were also noxious. Significant ichthyonoxicity was not detected in the remaining 7 species of sea stars, 3 sea urchins, and 1 sea cucumber. Chemical deterrents were generally effective at concentrations below a single egg or embryo per agar test-pellet. Although chemicals found in these eggs and embryos are noxious to an allopatric fish, they may not be noxious to sympatric fish.     

Sea Turtles in North Carolina Waters

Until the turn of the century the inshore waters of North Carolina harbored populations of sea turtles large enough to support a commercial fishery. Based on a 4- to-5-year record of sighting reports by the public, interviews of recreational fishermen, and records kept by commercial fishermen the waters continue to provide important developmental habitats for loggerhead, green, and Kemp's ridley sea turtles. Leathertback and hawksbill sea turtles infrequently entered the inshore waters. Reports from the public and commercial fishermen indicated that sea turtles were present offshore North Carolina all year and were present in inshore waters April through December. Sea turtles were encountered most frequently in the Atlantic Ocean, but seasonal encounters in some inshore waters, such as Core and Pamlico Sounds, often were greater. In early May large numbers of leatherbacks were sighted in the ocean and moved northward along the beach. Reported sightings of leatherbacks declined markedly by late June. Based on incidental captures by commercial fishermen loggerhead turtles were the most numerous species in Pamlico and Core Sounds (80%), followed by green (15%) and Kemp's ridley sea turtles (5%). Most captured turtles were immature, and all were released alive. The abundance of immature sea turtles in North Carolina inshore waters serves to emphasize that southeast U.S. estuaries are important habitats for these threatened and endangered species. This recognition supported the decision of the U.S. National Marine Fisheries Service to extend the requirement for turtle excluder devices in shrimp trawls to inshore areas during the entire year, full implementation of these requirements was achieved by December 1994.     

Etude préliminaire,in situ,de la distribution du plutonium dans différents tissus et organes de Cancer pagurus (Crustacea: Decapoda) et de Pleuronectes platessa (Pisces: Pleuronectidae)

Plutonium distribution was preliminary investigated in tissues and organs of the crab Cancer pagurus and the plaice Pleuronectes platessa collected inshore near the La Hague fuel reprocessing plant (France). There is an important transfer of plutonium from sea water to the gills and exoskeleton of the crab, these organs representing a large surface adsorption. In the plaice, only the gut strongly accumulates plutonium, indicating contamination by feeding. The edible parts of these two marine species, particularly the flesh, do not constitute, for man, an important source of contamination by environmental plutonium.     

Implications of Urbanization for Artisanal Parrotfish Fisheries in the Western Solomon Islands

Abstract: Increasing migration into urbanized centers in the Solomon Islands poses a great threat to adjacent coral reef fisheries because of negative effects on the fisheries and because it further erodes customary management systems. Parrotfish fisheries are of particular importance because the feeding habits of parrotfish (scrape and excavate coral) are thought to be critical to the resilience of coral reefs and to maintaining coral reef health within marine protected areas. We investigated the ecological impact of localized subsistence and artisanal fishing pressure on parrotfish fisheries in Gizo Town, Western Solomon Islands, by analyzing the density and size distribution of parrotfish with an underwater visual census (UVC), recall diary (i.e., interviews with fishers), and creel surveys to independently assess changes in abundance and catch‐per‐unit‐effort (CPUE) over 2 years. We then compared parrotfish data from Gizo Town with equivalent data from sites open to and closed to fishing in Kida and Nusa Hope villages, which have different customary management regimes. Results indicated a gradient of customary management effectiveness. Parrotfish abundance was greater in customary management areas closed to fishing, especially with regard to larger fish sizes, than in areas open to fishing. The decline in parrotfish abundance from 2004 to 2005 in Gizo was roughly the same magnitude as the difference in abundance decline between inside and outside customary management marine reserves. Our results highlight how weak forms of customary management can result in the rapid decline of vulnerable fisheries around urbanized regions, and we present examples in which working customary management systems (Kinda and Nusa Hope) can positively affect the conservation of parrotfish—and reef fisheries in general—in the highly biodiverse Coral Triangle region.     

Distribution of Todarodes pacificus (Cephalopoda: Ommastrephidae) paralarvae near the Kuroshio off southern Kyushu, Japan

The distribution and abundance of Japanese common squid [Todarodes pacificus (Steenstrup, 1880)] paralarvae off southern Kyushu Island near the Kuroshio were examined in relation to water types in the region. Surveys were conducted in 1996 and 1997 using paired, 70 cm diameter Bongo nets. Temperature–salinity plots from 0, 50 and 100 m depths were used to assign sampling stations to three water types: inshore, mixing and Kuroshio. In total, 4103 T. pacificus paralarvae were collected at 59 of 72 stations. Catch densities at positive stations ranged between 8 and 4282 ind./50 m² sea surface area. Catches during both years were highest in mixing waters, followed by inshore and Kuroshio waters. Total catches were highest just north of the oceanographic front at the inshore edge of the Kuroshio and declined with increasing distance away from the front. Catches of paralarvae ≤1.0 mm mantle length also peaked near the front. In both years, ≥85% of all paralarvae and ≥69% of those ≤1.0 mm mantle length occurred less than 25 km from the front. We conclude that most spawning off southwest Kyushu occurs near the frontal zone, where Kuroshio and inshore waters meet. Received: 18 November 1998 / Accepted: 11 May 1999     

Anchovy (<Emphasis Type="Italic">Engraulis encrasicolus</Emphasis>) egg density measurements in the Bay of Biscay: evidence for the spatial variation in egg density with sea surface salinity

Knowledge of the pelagic vertical distribution of fish eggs is central for several aspects of fisheries science including fisheries recruitment and egg production studies. In modelling egg vertical distributions, variation in fish egg density is an important issue. Though variation in egg density between individual eggs has been reported, evidence for significant spatial variation in egg density is novel. The present study provides evidence that egg density of anchovy (Engraulis encrasicolus) varies spatially across spawning sites in the Bay of Biscay, depending on the regional scale variation in sea water properties due to river discharge. We measured the density of the eggs using a density gradient column at 17 stations in 2005 and 2006 as well as their diameter. At station, the variability in the individual egg density was statistically distributed according to a Gaussian probability function. Significant variation in the mean egg density was observed across stations. Mean egg density displayed a significant correlation with sea surface salinity. Results are discussed in light of the mechanisms determining the egg density.     

Biochemical genetics of the sea anemone Bunodosoma cavernata and the zoogeography of the Gulf of Mexico

Much of the inshore fauna of the Gulf of Mexico has a disjunct distribution around the tip of Florida. Some of this fauna is composed of temperate, Carolinian species whose separation is thought to be due to warming after the last glacial period. Other species with this distribution are more eurythermal, and the vicariant event affecting them is unclear. One such eurythermal species is the sea anemone Bunodosoma cavernata. Using the genetic distance between Gulf and Atlantic populations of this species as an estimator of time since divergence, it is concluded that the vicariant event was the emergence of Florida in the Pliocene. It is suggested that the present Gulf Stream system maintains the separation of these populations.     

Habitat associations and diet of young-of-the-year Pacific cod (<Emphasis Type="Italic">Gadus macrocephalus</Emphasis>) near Kodiak,Alaska

The influence of environmental variables and habitat on growth and survival of juvenile gadoid species in the Atlantic has been clearly demonstrated; conversely, in the North Pacific little is known about the habitat and ecology of juvenile Pacific cod (Gadus macrocephalus Tilesius). The hypothesis that density of young-of-the-year (YOY) Pacific cod in nearshore habitats is predicted by shallow depth and the presence of eelgrass and macroalgae was tested in a variety of nearshore habitats adjacent to commercial fishing grounds near Kodiak Island, AK. From 10 to 22 August 2002, a beach seine and small-meshed beam trawl were used to capture YOY Pacific cod (n = 254) ranging from 42 to 110 mm fork length. Depth, water temperature, salinity, sediment grain size, and percent cover by emergent structure (i.e. tube-dwelling polychaetes, sea cucumber mounds, macroalgae) were measured prior to fishing. Density of YOY Pacific cod was highest in areas of moderate depth (15–20 m) and positively and linearly related to percent cover by sea cucumber mounds and to salinity. No previous studies have documented fish utilizing sea cucumber mounds as habitat. Furthermore, eelgrass and macroalgae were inconsequential to cod distribution. Diets consisted mainly of small calanoid copepods, mysids, and gammarid amphipods and were significantly related to cod length and depth. This work provides important information on previously undocumented factors that affect distribution and feeding of YOY Pacific cod, which ultimately influence growth and survival in this species.     

十二烷基苯磺酸钠(SDBS)及消油剂对刺参幼参的急性毒性

为探究表面活性剂对海洋棘皮动物的影响,测定了十二烷基苯磺酸钠(SDBS)和消油剂对刺参(Stichopus japonicas )幼参的急性毒性。结果显示,SDBS对刺参幼参的72 h-LC₅₀和96 h-LC₅₀分别为2.50和1.71 mg·L^-1;消油剂对刺参幼参的96 h-LC₅₀为7 498.94 mg·L^-1。刺参幼参相对于多刺裸腹溞(Moina macrocopa )和脊尾白虾仔虾(Palaemon carincauda )对SDBS的敏感性较高,相对于安氏伪镖水蚤(Pseudodiaptomus annandalei )对SDBS的敏感性则较低,SDBS对刺参幼参的毒性明显大于十二烷基磺酸钠(SDS),消油剂的96 h-LC₅₀ 远远大于SDBS和SDS,毒性非常小,但这仅是对刺参幼参而言,大多数研究忽视了消油剂自身对生物体存在的影响,因此这方面的研究工作还需要继续开展。     

The structure of subtidal algal and invertebrate assemblages at the Chatham Islands,New Zealand

We examined the distribution and abundance of organisms on subtidal rocky reefs at nine sites around the Chatham Islands, a remote group 780 km east of southern New Zealand. We sampled five depth strata ranging from 1 to<16 m to identify spatial patterns in the abundance of algae and invertebrates and to assess their variation within and among sites. This information is used to discuss hypotheses concerning community structure at this remote locality. Several patterns were apparent. The immediate subtidal was occupied by the southern bull kelp Durvillaea spp. A suite of 11 fucalean species were dominant to a depth of 10 m with an average abundance of 28 m^-2, while one species, Carpophyllum flexuosum, occurred mostly in deeper water. Only two laminarian species of algae were present at the islands. The indigenous Lessonia tholiformis was abundant at 2.5 to 15 m and was not found in deeper water, while the giant kelp Macrocystis pyrifera was abundant at two sites in 12 to 18 m. The commercially valuable abalone Haliotis iris was extremely abundant in shallow water, with an overall mean of 6 m^-2 at 5 m. The sea urchin Evechinus chloroticus was common, but reached high densities only in small (<25 m²) patches. The characteristic urchin-dominated zones reported in kelp beds world-wide were not seen. There was considerable site-to-site variation in the occurrence and abundance of individual species. Some differences between sites were associated with shelter from swell (e.g. M. pyrifera was found only in sheltered sites) and physical habitat (e.g. juvenile H. iris were found only beneath boulders inshore), but much of the variation could not be explained by physical or depth-related factors alone. We hypothesize that the differences in these kelp bed assemblages compared to mainland New Zealand are partially due to the high degree of endemism at the Chatham Islands. Local variation cannot be explained by herbivory, and is most likely the result of the various life-history characteristics of the major habitat-forming species, the large brown algae.     

Functional regression on remote sensing data in oceanography

The aim of this study is to propose the use of a functional data analysis approach as an alternative to the classical statistical methods most commonly used in oceanography and water quality management. In particular we consider the prediction of total suspended solids (TSS) based on remote sensing (RS) data. For this purpose several functional linear regression models and classical non-functional regression models are applied to 10 years of RS data obtained from medium resolution imaging spectrometer sensor to predict the TSS concentration in the coastal zone of the Guadalquivir estuary. The results of functional and classical approaches are compared in terms of their mean square prediction error values and the superiority of the functional models is established. A simulation study has been designed in order to support these findings and to determine the best prediction model for the TSS parameter in more general contexts.     

Assessment of total and organic vanadium levels and their bioaccumulation in edible sea cucumbers: tissues distribution,inter-species-specific,locational differences and seasonal variations

The objective of this study is to investigate the levels, inter-species-specific, locational differences and seasonal variations of vanadium in sea cucumbers and to validate further several potential factors controlling the distribution of metals in sea cucumbers. Vanadium levels were evaluated in samples of edible sea cucumbers and were demonstrated exhibit differences in different seasons, species and sampling sites. High vanadium concentrations were measured in the sea cucumbers, and all of the vanadium detected was in an organic form. Mean vanadium concentrations were considerably higher in the blood (sea cucumber) than in the other studied tissues. The highest concentration of vanadium (2.56 μg g⁻¹), as well as a higher degree of organic vanadium (85.5 %), was observed in the Holothuria scabra samples compared with all other samples. Vanadium levels in Apostichopus japonicus from Bohai Bay and Yellow Sea have marked seasonal variations. Average values of 1.09 μg g⁻¹ of total vanadium and 0.79 μg g⁻¹ of organic vanadium were obtained in various species of sea cucumbers. Significant positive correlations between vanadium in the seawater and V _org in the sea cucumber (r = 81.67 %, p = 0.00), as well as between vanadium in the sediment and V _org in the sea cucumber (r = 77.98 %, p = 0.00), were observed. Vanadium concentrations depend on the seasons (salinity, temperature), species, sampling sites and seawater environment (seawater, sediment). Given the adverse toxicological effects of inorganic vanadium and positive roles in controlling the development of diabetes in humans, a regular monitoring programme of vanadium content in edible sea cucumbers can be recommended.

     

Completely disjunct mitochondrial DNA haplotype distribution without a phylogeographic break in a planktonic developing gastropod

Planktonic developing organisms are generally assumed to be good dispersers showing little genetic structuring in neutral markers. At first glance, this also applies to the planktonic developing periwinkle Tectarius striatus, an endemic gastropod from Macaronesia (i.e. Azores, Madeira, Canary Islands and Cape Verde Islands), where the only sign of genetic structuring hitherto is provided by a non-significant allozyme/RAPD heterogeneity between the Cape Verde Islands and the other archipelagos. However, partial sequences of the mitochondrial cytochrome b and cytochrome oxidase I genes now show that the Cape Verde Islands and the three other archipelagos have no haplotypes in common, whereas the latter three do share several haplotypes. Nevertheless, this highly disjunct haplotype distribution does not entail a phylogeographic break separating the haplotypes of both areas in two reciprocally monophyletic groups. This remarkable geographic and phylogenetic structuring may be explained by assuming that T. striatus colonized the Macaronesian archipelagos in periods when sea levels were lower (and/or volcanic activity was higher), so that seamounts peaked above sea level and could act as stepping-stones. Yet, after the last glacial period seamounts submerged, thus preventing further stepping-stones mediated dispersal of T. striatus between the Cape Verde Islands and the other archipelagos, while not affecting dispersal among the latter because of their closer proximity and connectivity. Hence, these contrasting patterns of neutral genetic variation in T. striatus show that genetic structuring in planktonic developing species may be far more complex than is usually assumed.     

Comparison and ranking of different modelling techniques for prediction of site index in Mediterranean mountain forests

Forestry science has a long tradition of studying the relationship between stand productivity and abiotic and biotic site characteristics, such as climate, topography, soil and vegetation. Many of the early site quality modelling studies related site index to environmental variables using basic statistical methods such as linear regression. Because most ecological variables show a typical non-linear course and a non-constant variance distribution, a large fraction of the variation remained unexplained by these linear models. More recently, the development of more advanced non-parametric and machine learning methods provided opportunities to overcome these limitations. Nevertheless, these methods also have drawbacks. Due to their increasing complexity they are not only more difficult to implement and interpret, but also more vulnerable to overfitting. Especially in a context of regionalisation, this may prove to be problematic. Although many non-parametric and machine learning methods are increasingly used in applications related to forest site quality assessment, their predictive performance has only been assessed for a limited number of methods and ecosystems.In this study, five different modelling techniques are compared and evaluated, i.e. multiple linear regression (MLR), classification and regression trees (CART), boosted regression trees (BRT), generalized additive models (GAM), and artificial neural networks (ANN). Each method is used to model site index of homogeneous stands of three important tree species of the Taurus Mountains (Turkey): Pinus brutia, Pinus nigra and Cedrus libani. Site index is related to soil, vegetation and topographical variables, which are available for 167 sample plots covering all important environmental gradients in the research area. The five techniques are compared in a multi-criteria decision analysis in which different model performance measures, ecological interpretability and user-friendliness are considered as criteria.When combining these criteria, in most cases GAM is found to outperform all other techniques for modelling site index for the three species. BRT is a good alternative in case the ecological interpretability of the technique is of higher importance. When user-friendliness is more important MLR and CART are the preferred alternatives. Despite its good predictive performance, ANN is penalized for its complex, non-transparent models and big training effort.     

Predicting the Spatial Distribution of a Seabird Community to Identify Priority Conservation Areas in the Timor Sea

Understanding spatial and temporal variability in the distribution of species is fundamental to the conservation of marine and terrestrial ecosystems. To support strategic decision making aimed at sustainable management of the oceans, such as the establishment of protected areas for marine wildlife, we identified areas predicted to support multispecies seabird aggregations in the Timor Sea. We developed species distribution models for 21 seabird species based on at‐sea survey observations from 2000–2013 and oceanographic variables (e.g., bathymetry). We applied 4 statistical modeling techniques and combined the results into an ensemble model with robust performance. The ensemble model predicted the probability of seabird occurrence in areas where few or no surveys had been conducted and demonstrated 3 areas of high seabird richness that varied little between seasons. These were located within 150 km of Adele Island, Ashmore Reef, and the Lacepede Islands, 3 of the largest aggregations of breeding seabirds in Australia. Although these breeding islands were foci for high species richness, model performance was greatest for 3 nonbreeding migratory species that would have been overlooked had regional monitoring been restricted to islands. Our results indicate many seabird hotspots in the Timor Sea occur outside existing reserves (e.g., Ashmore Reef Marine Reserve), where shipping, fisheries, and offshore development likely pose a threat to resident and migratory populations. Our results highlight the need to expand marine spatial planning efforts to ensure biodiversity assets are appropriately represented in marine reserves. Correspondingly, our results support the designation of at least 4 new important bird areas, for example, surrounding Adele Island and Ashmore Reef. Pronostico de la Distribución Espacial de una Comunidad de Aves Marinas para Identificar Áreas Prioritarias de Conservación en el Mar de Timor     

Reproduction,growth and mortality of the holothurian Cucumaria pseudocurata

Certain phases of the ecology of a sea cucumber (Cucumaria pseudocurata Deichmann, 1938) population at Shell Beach, Sonoma County, California (USA), were investigated. The sea cucumber is a brooder, lays large (1 mm diameter) yolky eggs, which undergo direct development. It forms large aggregations in the rocky intertidal zone, extending from the lower boundary of the Mytilus californianus beds to about zero tide-level. The gonad cycle was followed from September, 1970 to January, 1972. Spawning occurred in January, 1971 and January, 1972. The holothurians produce from 1 to as many as 340 eggs, depending on the size of the individual; they completely spawn-out in a few days. Hatching takes place about 1 month after egg laying. The main sources of mortality are predation by the sea star Pycnopodia helianthoides and wave action. Survival of the young is negatively correlated with density of the aggregation. C. pseudocurata increases in weight 10 to 30 fold in the first year, but much more slowly in later years. Individuals live perhaps 5 years or more, and do not become reproductive until about the third year. Dispersal is accomplished by the young being washed away to a suitable new habitat. The upper range of the intertidal distribution is determined by exposure to air, and the lower range by P. helianthoides predation.Contribution No. 1 of the Bodega Marine Sciences Association.     

The combined effects of high salinity and temperature on the survival of young Limanda limanda

Young specimens of the most common inshore flatfish, the dab Limanda limanda (Linnaeus, 1758), in the area of a proposed concentrated brine discharge, off the Yorkshire coast (England) were subjected to high salinities over temperatures corresponding to an annual temperature range. The results of these experiments have been used in the design of a dilution and dispersion system to protect the inshore fisheries. Mortality was found to be size-dependent, smaller dabs being least resistant. Response-surface analyses were utilised, showing mortality in relation to immersion time. The effect of temperature slowly declines with increased immersion time, and salinity becomes increasingly the more dominant effect. A significant salinity-temperature interaction was observed, which reached its peak effect at 3 h immersion. A 3-dimensional response-surface model of the mortality contours, for salinity, temperature, and immersion time, was produced which may be used to set upper limits to the design of the effluent disposal system. It is concluded that, provided salinity does not rise above 55, it is unlikely that significant changes in the L. limanda populations will occur.     

Approaching the upper boundary of driver-response relationships: identifying factors using a novel framework integrating quantile regression with interpretable machine learning

● A novel framework integrating quantile regression with machine learning is proposed. ● It aims to identify factors driving observations to upper boundary of relationship. ● Increasing N:P and TN concentration help fulfill the effect of TP on CHL. ● Wetter and warmer decrease potential and increase eutrophication control difficulty. ● The framework advances applications of quantile regression and machine learning. The identification of factors that may be forcing ecological observations to approach the upper boundary provides insight into potential mechanisms affecting driver-response relationships, and can help inform ecosystem management, but has rarely been explored. In this study, we propose a novel framework integrating quantile regression with interpretable machine learning. In the first stage of the framework, we estimate the upper boundary of a driver-response relationship using quantile regression. Next, we calculate “potentials” of the response variable depending on the driver, which are defined as vertical distances from the estimated upper boundary of the relationship to observations in the driver-response variable scatter plot. Finally, we identify key factors impacting the potential using a machine learning model. We illustrate the necessary steps to implement the framework using the total phosphorus (TP)-Chlorophyll a (CHL) relationship in lakes across the continental US. We found that the nitrogen to phosphorus ratio (N׃P), annual average precipitation, total nitrogen (TN), and summer average air temperature were key factors impacting the potential of CHL depending on TP. We further revealed important implications of our findings for lake eutrophication management. The important role of N׃P and TN on the potential highlights the co-limitation of phosphorus and nitrogen and indicates the need for dual nutrient criteria. Future wetter and/or warmer climate scenarios can decrease the potential which may reduce the efficacy of lake eutrophication management. The novel framework advances the application of quantile regression to identify factors driving observations to approach the upper boundary of driver-response relationships.