The effects of temperature,body size and growth rate on energy losses due to metabolism in early life stages of haddock (<Emphasis Type="Italic">Melanogrammus aeglefinus</Emphasis>)

Rates of routine respiration (R _R, μl O₂ fish⁻¹ h⁻¹) and total ammonia nitrogen excretion (E _R, μg NH₄–N + NH₃–N fish⁻¹ h⁻¹) were measured on larval and juvenile haddock (Melanogrammus aeglefinus) to ascertain how energy losses due to metabolism were influenced by temperature (T), dry body mass (M _D, mg) and specific growth rate (SGR, % per day). R _R and E _R increased with M _D according to y = a  · M _D ^b with b-values of 0.96, 0.98, 1.14, and 0.89, 0.78, 0.74, respectively, at 10, 7, and 4°C, respectively. Multiple regressions explained 98% of the variability in the combined effects of M _D and T on R _R and E _R in larval haddock: R _R = 0.97 · M _D ^0.98  · e^0.092 · T ; E _R = 0.06 · M _D ^0.79  · e^0.092 · T . In young juvenile (24–30 mm standard length) haddock, R _R tended to decline (P = 0.06) and E _R significantly declined (P = 0.02) with increasing SGR. O:N ratios significantly increased with increasing SGR suggesting that N was spared in relatively fast-growing individuals. Our results for young larval and juvenile haddock suggest: (1) nearly isometric scaling of R _R with increasing body size, (2) allometric scaling of E _R with increasing body size, (3) Q ₁₀ values of 2.5 for both R _R and E _R, (4) metabolic differences in substrate utilization between relatively fast- and slow-growing individuals, and (5) that rates of routine energy loss and growth were not positively related. The measurements in this study will provide robust parameter estimates for individual-based models that are currently being utilized to investigate how variability in climatic forcing influences the vital rates of early life stages of haddock. Our results also stress that inter-individual differences in rates of energy loss should not be overlooked as a factor influencing growth variability among individuals.     

Effects of temperature and body mass on metabolic rates of sprat, Sprattus sprattus L.

Sprat, Sprattus sprattus L., is a small schooling clupeid forming large stocks in several ecosystems. Despite its high trophodynamic impact, little is known about its energy consumption rates. As a central component of a bioenergetic budget, metabolic rates of sprat from 3.11 to 9.71 g wet weight (WW) were measured at nine different temperatures (T) ranging from 9 to 21°C using a computer-controlled intermittent-flow respirometer. Routine metabolism (R _R) was related to T (°C) and WW (g) by R _R = 0.074 WW^1.077 e^{0.080 T}. Standard metabolic rates (R _S) as calculated from the 10% percentiles of the repeated measurements were on average 12% lower and still influenced by continuous swimming activity: R _S = 0.069 WW^1.073 e^{0.078 T}. We interpret the deviation of the scaling exponent b from typically found exponents of b ~ 0.8 as a consequence of permanently elevated activity level. The high permanent swimming activities also indicated that the concept of standard metabolism may not be meaningful in schooling planktivorous fish. These results suggest that generally in bioenergetic models for clupeid schooling fish the activity multipliers should be chosen very conservatively.     

Evaluating pollution-related damage and restoration success in urban forests with participatory monitoring and digital tools

Peri-urban forest monitoring requires indicators of vegetation damage. An example is the sacred fir (Abies religiosa) forests surrounding Mexico City, which have been heavily exposed to tropospheric ozone, a harmful pollutant, for over 4 decades. We developed a participatory monitoring system with which local community members and scientists generated data on ozone tree damage. Santa Rosa Xochiac rangers (13) used the digital tool KoboToolBox to record ozone damage to trees, tree height, tree ages, tree condition, tree position, and whether the tree had been planted. Thirty-five percent of the trees (n = 1765) had ozone damage. Younger trees had a lower percentage of foliage damaged by ozone than older trees (p < 0.0001), and asymptomatic trees tended to be younger (p < 0.0001). Symptomatic trees were taller than asymptomatic trees of the same age (R²_c = 0.43, R²_m = 0.27). Involving local communities facilitated forest monitoring and using digital technology improved data quality. This participatory system can be used to monitor forest condition change over time and thus aids restoration efforts driven by government or local communities’ interests, facilitating local decision-making.     

Does defoliation induce chemical and morphological defenses in the leaves of silver birch seedlings under changing climate?

Summary.  We examined the effects of defoliation con-currently with elevated temperature and CO₂ on some chemical and morphological characteristics in the leaves of silver birch seedlings (Betula pendula). We also analyzed the consequent changes in the palatability of leaves for adult blue alder leaf beetles (Agelastica alni). Under the different climatic treatments, the seedlings were subjected to three fertilizer treatments (0 kg, 130 kg and 270 kg N ha⁻¹) and defoliation treatments (0%, 25% and 50% of the total leaf area). In each climatic treatment, fertilization increased the nitrogen content in the leaves, but decreased total concentrations of soluble phenolics, detected by high-performance liquid chromatography (HPLC), and insoluble condensed tannins. Defoliation, both independently and in combination with elevated temperature and CO₂, decreased the concentrations of the phenolics. Compared to the intact controls, the leaves of the defoliated seedlings were smaller and tougher. Under elevated temperature, the beetles consumed a smaller amount of the leaves of plants subjected to the high fertilization, while under ambient climatic conditions, fertilization increased the feeding. The total leaf consumption was higher under the ambient climatic conditions than under elevated temperature, elevated CO₂ or the combination of elevated temperature and CO₂.     

Post-larval development of two intertidal barnacles at elevated CO2 and temperature

Ocean acidification and global warming are occurring concomitantly, yet few studies have investigated how organisms will respond to increases in both temperature and CO₂. Intertidal microcosms were used to examine growth, shell mineralogy and survival of two intertidal barnacle post-larvae, Semibalanus balanoides and Elminius modestus, at two temperatures (14 and 19°C) and two CO₂ concentrations (380 and 1,000 ppm), fed with a mixed diatom-flagellate diet at 15,000 cells ml⁻¹ with flow rate of 10 ml⁻¹ min⁻¹. Control growth rates, using operculum diameter, were 14 ± 8 μm day⁻¹ and 6 ± 2 μm day⁻¹ for S. balanoides and E. modestus, respectively. Subtle, but significant decreases in E. modestus growth rate were observed in high CO₂ but there were no impacts on shell calcium content and survival by either elevated temperature or CO₂. S. balanoides exhibited no clear alterations in growth rate but did show a large reduction in shell calcium content and survival under elevated temperature and CO₂. These results suggest that a decrease by 0.4 pH_(NBS) units alone would not be sufficient to directly impact the survival of barnacles during the first month post-settlement. However, in conjunction with a 4–5°C increase in temperature, it appears that significant changes to the biology of these organisms will ensue.     

Removal of olive mill waste water phenolics using a crude peroxidase extract from onion by-products

Olive mill waste water (OMWW) originating from a two-phase olive oil-producing plant was treated with a crude peroxidase extract prepared from onion solid by-products. The treatments were based on a 3 × 3 factorial design, employing a series of combinations of pH and H₂O₂, in order to identify optimal operational conditions. The treatment performance was assessed by estimating the removal percentage of total polyphenols. The model established produced a satisfactory fitting of the data (R ² = 0.94, p = 0.0158), while the second-order polynomial equation used to describe the process indicated that peroxidase-catalysed polyphenol removal in diluted OMWW is facilitated at relatively low pH and intermediate H₂O₂ values. A predicted value of 50.7 ± 9.5% removal was calculated under optimal operational conditions (pH 2.76, [H₂O₂] = 3.56 mM). Analysis of an untreated and an optimally treated sample by high performance liquid chromatography revealed that enzyme treatment brought about alteration in the original OMWW polyphenolic profile. The use of peroxidase from onion solid by-products is proposed as an alternative means that could have a prospect in bioremediation applications.     

Automated method for the determination of total arsenic and selenium in natural and drinking water by HG-AAS

A multicommutated flow system was designed and evaluated for the determination of total arsenic and selenium by Hydride Generation Atomic Absorption Spectrometry (HG-AAS). It was applied to the determination of arsenic and selenium in samples of natural and drinking water. Detection limits were 0.46 and 0.08 μg l⁻¹ for arsenic and selenium, respectively; sampling frequency was 120 samples h⁻¹ for arsenic and 160 samples h⁻¹ for selenium. Linear ranges found were 1.54–10 μg l⁻¹ (R = 0.999) for arsenic and 0.27–27 μg l⁻¹ (R = 0.999) for selenium. Accuracy was evaluated by spiking various water samples and using a reference material. Recoveries were in the range 95–116%. Analytical precision (s _r (%), n = 10) was 6% for both elements. Compared with the Standard Methods, APHA, 3114B manual method, the system consumes at least 10 times less sample per determination, and the quantities of acid and reducing agent used are significantly lower with a reduction in the generation of pollutants and waste. As an additional advantage, the system is very fast, efficient and environmentally friendly for monitoring total arsenic and selenium levels in waters.     

Cuttlebone calcification increases during exposure to elevated seawater pCO2 in the cephalopod Sepia officinalis

Changes in seawater carbonate chemistry that accompany ongoing ocean acidification have been found to affect calcification processes in many marine invertebrates. In contrast to the response of most invertebrates, calcification rates increase in the cephalopod Sepia officinalis during long-term exposure to elevated seawater pCO₂. The present trial investigated structural changes in the cuttlebones of S. officinalis calcified during 6 weeks of exposure to 615 Pa CO₂. Cuttlebone mass increased sevenfold over the course of the growth trail, reaching a mean value of 0.71 ± 0.15 g. Depending on cuttlefish size (mantle lengths 44–56 mm), cuttlebones of CO₂-incubated individuals accreted 22–55% more CaCO₃ compared to controls at 64 Pa CO₂. However, the height of the CO₂-exposed cuttlebones was reduced. A decrease in spacing of the cuttlebone lamellae, from 384 ± 26 to 195 ± 38 μm, accounted for the height reduction The greater CaCO₃ content of the CO₂-incubated cuttlebones can be attributed to an increase in thickness of the lamellar and pillar walls. Particularly, pillar thickness increased from 2.6 ± 0.6 to 4.9 ± 2.2 μm. Interestingly, the incorporation of non-acid-soluble organic matrix (chitin) in the cuttlebones of CO₂-exposed individuals was reduced by 30% on average. The apparent robustness of calcification processes in S. officinalis, and other powerful ion regulators such as decapod cructaceans, during exposure to elevated pCO₂ is predicated to be closely connected to the increased extracellular [HCO₃ ⁻] maintained by these organisms to compensate extracellular pH. The potential negative impact of increased calcification in the cuttlebone of S. officinalis is discussed with regard to its function as a lightweight and highly porous buoyancy regulation device. Further studies working with lower seawater pCO₂ values are necessary to evaluate if the observed phenomenon is of ecological relevance.     

Moderate seawater acidification does not elicit long-term metabolic depression in the blue mussel Mytilus edulis

Marine organisms are exposed to increasingly acidic oceans, as a result of equilibration of surface ocean water with rising atmospheric CO₂ concentrations. In this study, we examined the physiological response of Mytilus edulis from the Baltic Sea, grown for 2 months at 4 seawater pCO₂ levels (39, 113, 243 and 405 Pa/385, 1,120, 2,400 and 4,000 μatm). Shell and somatic growth, calcification, oxygen consumption and \textNH₄ ⁺ {\text{NH}}_{4}^{ + } excretion rates were measured in order to test the hypothesis whether exposure to elevated seawater pCO₂ is causally related to metabolic depression. During the experimental period, mussel shell mass and shell-free dry mass (SFDM) increased at least by a factor of two and three, respectively. However, shell length and shell mass growth decreased linearly with increasing pCO₂ by 6–20 and 10–34%, while SFDM growth was not significantly affected by hypercapnia. We observed a parabolic change in routine metabolic rates with increasing pCO₂ and the highest rates (+60%) at 243 Pa. \textNH₄ ⁺ {\text{NH}}_{4}^{ + } excretion rose linearly with increasing pCO₂. Decreased O:N ratios at the highest seawater pCO₂ indicate enhanced protein metabolism which may contribute to intracellular pH regulation. We suggest that reduced shell growth under severe acidification is not caused by (global) metabolic depression but is potentially due to synergistic effects of increased cellular energy demand and nitrogen loss.     

Heterotrophic nitrogen fixation (acetylene reduction) during leaf-litter decomposition of two mangrove species from South Florida, USA

Heterotrophic nitrogen-fixation (acetylene reduction) was measured during decomposition (under dark conditions) of Rhizophora mangle L. and Avicennia germinans (L.) Stearn leaf litter. Nitrogen-fixation rates in leaf litter increased following 24 d incubation, then decreased after ≃44 d for both species. Maximum rates of 66.2 and 64.6 nmol C₂H₄ g⁻¹ dry wt h⁻¹ were reached by R. mangle and A. germinans leaf litter, respectively. Higher fixation rates of leaf litter were associated with an increase in water content and sediment particles on leaf surfaces of both species. Rates of nitrogen fixation by diazotrophs attached to sediment particles were not significantly different from zero. With additions of d-glucose, ethylene production rates increased by factors of 625-, 34- and 7-fold for sediment, R. mangle and A.␣germinans leaf litter, respectively, compared to rates prior to enrichment. These organically enhanced rates of nitrogen fixation on leaves could be accounted for by increased activity associated with attached sediment particles and not the leaf material. Total phenolics [reported as tannic acid equivalent (TAE) units] decreased nitrogen-fixation rates when added to d-glucose-enriched sediment at >20 mg TAE l⁻¹. Phenolic compounds could explain the initial lag in rates of nitrogen fixation during leaf-litter decomposition of R. mangle (initial content of 110.8 mg TAE g⁻¹ dry wt), but not of A. germinans (initial content of 23.4 mg TAE g⁻¹ dry wt). The higher phenolic content and reportedly lower carbon substrate of R. mangle did not result in species-specific differences in either the magnitude or temporal pattern of nitrogen fixation compared to A. germinans leaf litter. We conclude that the availability of organic substrates leached from the leaf litter along with colonization by the heterotrophic diazotrophs (as indicated by sediment accumulation) controls nitrogen-fixation rates in a similar manner in the leaf litter of both species. Received: 8 August 1997 / Accepted: 4 December 1997     

Photosynthetic performance of giant clams, Tridacna maxima and T. squamosa, Red Sea

Two species of giant clams, Tridacna maxima and T. squamosa, coexist in the Red Sea, but exhibit distinctly different depth distributions: T. maxima mostly occurs in shallow waters (reef flat and edge), while T. squamosa may occur down to the lower fore-reef slope. Giant clams have been described as mixotrophic, capable of both filter-feeding and photosynthesis due to algal symbionts (zooxanthellae), therefore, observed depth preferences were investigated in relation to possible differences in autotrophy vs. heterotrophy. This study was conducted from April to June 2004, at the reef near the Marine Science Station, Aqaba, Gulf of Aqaba, Red Sea, and in May 2007, at a reef near Dahab, Sinai Peninsula, Egypt. In situ measurements using a submersible pulse amplitude modulated fluorometer (Diving PAM), revealed no significant differences in effective PSII quantum yield (ΔF/Fm′) and relative electron transport rates (ETR) between the two species; but rapid light curves (ETR vs. light, photosynthetically active irradiance, PAR) showed significant differences in maximum photosynthetic rates (ETR_max), with 20% higher values in T. maxima. Chamber incubations displayed higher net and gross oxygen production by T. maxima (88.0 and 120.3 μmol O₂ cm⁻² mantle area day⁻¹) than T. squamosa (56.7 and 84.8 μmol O₂ cm⁻² mantle area day⁻¹); even under shading conditions (simulated depth of 20 m) T. maxima still achieved 93% of the surface gross O₂ production, whereas T. squamosa reached only 44%. A correlation was found between ETR and net photosynthesis measured as oxygen production (T. maxima: R ² = 0.53; T. squamosa: R ² = 0.61). Calculated compensation depth (CD) (gross photosynthesis equals respiration) in T. maxima (16 m) matches the maximum depth of occurrence in this study (17 m). By contrast, the CD of T. squamosa (9 m) was much shallower than the maximum vertical range (42 m). Findings suggest T. maxima is a strict functional photoautotroph limited by light, whereas T. squamosa is a mixotroph whose photoautotrophic range is extended by heterotrophy. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Characteristics of PM<Subscript>2.5</Subscript>, CO<Subscript>2</Subscript> and particle-number concentration in mass transit railway carriages in Hong Kong

Fine particulate matter (PM_2.5) levels, carbon dioxide (CO₂) levels and particle-number concentrations (PNC) were monitored in train carriages on seven routes of the mass transit railway in Hong Kong between March and May 2014, using real-time monitoring instruments. The 8-h average PM_2.5 levels in carriages on the seven routes ranged from 24.1 to 49.8 µg/m³, higher than levels in Finland and similar to those in New York, and in most cases exceeding the standard set by the World Health Organisation (25 µg/m³). The CO₂ concentration ranged from 714 to 1801 ppm on four of the routes, generally exceeding indoor air quality guidelines (1000 ppm over 8 h) and reaching levels as high as those in Beijing. PNC ranged from 1506 to 11,570 particles/cm³, lower than readings in Sydney and higher than readings in Taipei. Correlation analysis indicated that the number of passengers in a given carriage did not affect the PM_2.5 concentration or PNC in the carriage. However, a significant positive correlation (p < 0.001, R ² = 0.834) was observed between passenger numbers and CO₂ levels, with each passenger contributing approximately 7.7–9.8 ppm of CO₂. The real-time measurements of PM_2.5 and PNC varied considerably, rising when carriage doors opened on arrival at a station and when passengers inside the carriage were more active. This suggests that air pollutants outside the train and passenger movements may contribute to PM_2.5 levels and PNC. Assessment of the risk associated with PM_2.5 exposure revealed that children are most severely affected by PM_2.5 pollution, followed in order by juveniles, adults and the elderly. In addition, females were found to be more vulnerable to PM_2.5 pollution than males (p < 0.001), and different subway lines were associated with different levels of risk.     

Effect of body mass,temperature and food deprivation on oxygen consumption rate of common cuttlefish <Emphasis Type="Italic">Sepia officinalis</Emphasis>

Predictions of short and long term changes in Sepia officinalis metabolism are useful, since this species is both economically important for aquaculture and also is an ideal experimental laboratory organism. In this study standard and routine oxygen consumption rates of newly hatched and juvenile laboratory raised cuttlefish S. officinalis ranging between 0.04 and 18.48 g dry body mass (Dm), were measured over a range of temperatures (10, 15, 20 and 25°C). The mass exponent (b) ranged between 0.706 and 0.992 for standard oxygen consumption and between 0.694 and 0.990 for routine oxygen consumption. Oxygen consumption scaled allometrically (b = 0.7) with body mass for cuttlefish <2 g Dm and isometrically (b = 1) thereafter. No significant differences were apparent amongst the slopes of oxygen consumption and body mass at different temperatures for standard and routine oxygen consumption. However, the intercepts differed significantly amongst the regression lines, indicating a significant effect of temperature on the magnitude of oxygen consumption. The combined effect of temperature (T) and dry body mass (Dm) are best described by the following equations: cuttlefish <2 g, MO₂ = 0.116Dm^0.7111.086 ^T and >2 g, MO₂ = 0.076Dm^0.9831.091 ^T for standard oxygen consumption; cuttlefish <2 g, MO₂ = 0.538Dm^0.7291.057 ^T and >2 g, MO₂ = 0.225Dm^0.9621.081 ^T for routine oxygen consumption. Using these equations it was estimated that a cuttlefish of 1 g Dm held at 20°C, eating 5% Dm day⁻¹ and undergoing standard and routine metabolism consumes 21.3 and 35.4%, respectively of its total daily energy intake. Juvenile cuttlefish (3.32–5.08 g Dm) held at 15°C and deprived of food for 27 days maintained a stable standard oxygen consumption rate for the first 6 days following starvation. By the 18th day without food, oxygen consumption rate had declined by 53% and further declined to 65% below the standard oxygen consumption rate on the 27th day. Upon resumption of feeding, the respiration rate returned immediately to the initial level prior to food deprivation. The present study defines the basic energy requirements and general physiological state of young cuttlefish at temperatures of 10–25°C with and without food.     

Tracing the sources of gaseous components (<Superscript>222</Superscript>Rn,CO<Subscript>2</Subscript> and its carbon isotopes) in soil air under a cool-deciduous stand in Sapporo,Japan

Radon (²²²Rn) and carbon dioxide were monitored simultaneously in soil air under a cool-temperate deciduous stand on the campus of Hokkaido University, Sapporo, Japan. Both ²²²Rn and CO₂ concentrations in soil air varied with atmospheric (soil) temperature in three seasons, except for winter when the temperature in soil air remained constant at 2–3°C at depth of 80 cm. In winter, the gaseous components were influenced by low-pressure region passing through the observation site when the ground surface was covered with snow of ~1 m thickness. Carbon isotopic analyses of CO₂ suggested that CO₂ in soil air may result from mixing of atmospheric air and soil components of different origins, i.e. CO₂ from contemporary soil organic matter and old carbon from deeper source, to varying degrees, depending on seasonal meteorological and thus biological conditions.     

Modeling seasonal course of carbon fluxes and evapotranspiration in response to low temperature and moisture in a boreal Scots pine ecosystem

Environmental conditions act above and below ground, and regulate carbon fluxes and evapotranspiration. The productivity of boreal forest ecosystems is strongly governed by low temperature and moisture conditions, but the understanding of various feedbacks between vegetation and environmental conditions is still unclear. In order to quantify the seasonal responses of vegetation to environmental factors, the seasonality of carbon and heat fluxes and the corresponding responses for temperature and moisture in air and soil were simulated by merging a process-based model (CoupModel) with detailed measurements representing various components of a forest ecosystem in Hyytiälä, southern Finland. The uncertainties in parameters, model assumptions, and measurements were identified by generalized likelihood uncertainty estimation (GLUE). Seasonal and diurnal courses of sensible and latent heat fluxes and net ecosystem exchange (NEE) of CO₂ were successfully simulated for two contrasting years. Moreover, systematic increases in efficiency of photosynthesis, water uptake, and decomposition occurred from spring to summer, demonstrating the strong coupling between processes. Evapotranspiration and NEE flux both showed a strong response to soil temperature conditions via different direct and indirect ecosystem mechanisms. The rate of photosynthesis was strongly correlated with the corresponding water uptake response and the light use efficiency. With the present data and model assumptions, it was not possible to precisely distinguish the various regulating ecosystem mechanisms. Our approach proved robust for modeling the seasonal course of carbon fluxes and evapotranspiration by combining different independent measurements. It will be highly interesting to continue using long-term series data and to make additional tests of optional stomatal conductance models in order to improve our understanding of the boreal forest ecosystem in response to climate variability and environmental conditions.     

Ontogenetic habitat shift,population growth,and burrowing behavior of the Indo-Pacific beach star, <Emphasis Type="Italic">Archaster typicus</Emphasis> (Echinodermata; Asteroidea)

Archaster typicus, a common sea star in Indo-Pacific regions, has been a target for the ornamental trade, even though little is known about its population biology. Spatial and temporal patterns of abundance and size structure of A. typicus were studied in the Davao Gulf, the Philippines (125°42.7′E, 7°0.6′N), from February 2008 to December 2009. Specimens of A. typicus were associated with intertidal mangrove prop roots, seagrass meadows, sandy beaches, and shoals. Among prop roots, specimens were significantly smaller and had highest densities (131 ind. m⁻²) between November and March. High organic matter in sediment and a relatively low predation rate seemed to support juvenile life among mangroves. Size and density analyses provided evidence that individuals gradually move to seagrass, sandy habitats, and shoals as they age. Specimens were significantly larger at a shoal (maximum radius R = 81 mm). New recruits were found between August and November in both 2008 and 2009. Timing of recruitment and population size frequencies confirmed a seasonal reproductive cycle. Juveniles had relatively high growth rates (2–7 mm month⁻¹) and may reach an R of 20–25 mm after 1 year. Growth rates of larger specimens (R > 30 mm) were generally <2 mm month⁻¹. The activity pattern of A. typicus was related to the tidal phase and not to time of day: Specimens moved over the sediment surface during low tides and were burrowed during high tides possibly avoiding predation. This is one of the first studies to document an ontogenetic habitat shift for sea stars and provides new biological information as a basis for management of harvested A. typicus populations.     

Large-eddy simulation of low-level jet-like flow in a canopy

The computational method of Large-Eddy Simulations has been used to study the weak, neutrally stable drainage flow within tree canopies. The computational results show that a secondary velocity maximum that resembles a jet is formed within the canopy under the nocturnal flow conditions. This jet-like flow is important in the analysis and measurements of the net ecosystem-atmosphere exchange (NEE) for carbon dioxide (CO₂). A uniformly distributed, plane source was placed within the canopy in order to simulate the nocturnal production of CO₂. The NEE is calculated as the sum of the integration of the rate of change of the concentration of CO₂ over the computational domain, the vertical turbulent flux measured directly by eddy-covariance (EC) method, and the advection terms, which are not taken into account in the EC method. Numerical results of the velocity and concentration fields, within and above the canopy, are presented and their impact on the CO₂ transport is investigated in detail. The computational results show that 15–20% of NEE is drained out by the advection process under the canopy. The results also show that the turbulent fluctuations in the lateral direction are also significant and may result in 2–5% CO₂ transport.     

Spatially distributed modeling of the long-term carbon balance of a boreal landscape

Spatially and temporally distributed information on the sizes of biomass carbon (C) pools (BCPs) and soil C pools (SCPs) is vital for improving our understanding of biosphere-atmosphere C fluxes. Because the sizes of C pools result from the integrated effects of primary production, age-effects, changes in climate, atmospheric CO₂ concentration, N deposition, and disturbances, a modeling scheme that interactively considers these processes is important. We used the InTEC model, driven by various spatio-temporal datasets to simulate the long-term C-balance in a boreal landscape in eastern Canada. Our results suggested that in this boreal landscape, mature coniferous stands had stabilized their productivity and fluctuated as a weak C-sink or C-source depending on the interannual variations in hydrometeorological factors. Disturbed deciduous stands were larger C-sinks (NEP₂₀₀₄ = 150 gC m⁻² yr⁻¹) than undisturbed coniferous stands (e.g. NEP₂₀₀₄ = 8 gC m⁻² yr⁻¹). Wetlands had lower NPP but showed temporally consistent C accumulation patterns. The simulated spatio-temporal patterns of BCPs and SCPs were unique and reflected the integrated effects of climate, plant growth and atmospheric chemistry besides the inherent properties of the C pool themselves. The simulated BCPs and SCPs generally compared well with the biometric estimates (BCPs: r = 0.86, SCPs: r = 0.84). The largest BCP biases were found in recently disturbed stands and the largest SCP biases were seen in locations where moss necro-masses were abundant. Reconstructing C pools and C fluxes in the ecosystem in such a spatio-temporal manner could help reduce the uncertainties in our understanding of terrestrial C-cycle.     

Response of hydrothermal vent vestimentiferan <Emphasis Type="Italic">Riftia pachyptila</Emphasis> to differences in habitat chemistry

Vestimentiferan tubeworms, which rely on intracellular sulfide-oxidizing autotrophic bacteria for organic carbon, flourish at deep-sea hydrothermal vents despite the erratic nature of their habitat. To assess the degree to which differences in habitat chemistry (sulfide, pH/CO₂) might impact host and symbiont metabolic activity, Riftia pachyptila tubeworms were collected from habitats with low (H₂S < 0.0001 mM) and high (up to 0.7 mM) sulfide concentrations. The elemental sulfur content of the symbiont-containing trophosome organ was lower in specimens collected from the low-sulfide site. Symbiont abundance, RubisCO activity, and trophosome carbon fixation rates were not significantly different for individuals collected from low- versus high-sulfide habitats. Carbonic anhydrase activities were higher in the anterior gas exchange organs of R. pachyptila from the low-sulfide habitat. Despite large differences in habitat chemistry, symbiont abundance and autotrophic potential were consistent, while the host appears to tailor carbonic anhydrase activity to environmental CO₂ availability.     

Modeling carbon sequestration under zero tillage at the regional scale. I. The effect of soil erosion

Zero tillage is recognized as a potential measure to sequester carbon dioxide in soils and to reduce CO₂ emissions from arable lands. An up-scaling approach of the output of the Environmental Policy Integrated Climate (EPIC) model with the information system SLISYS-BW has been used to estimate the CO₂-mitigation potential in the state of Baden-Württemberg (SW-Germany). The state territory of 35,742 km² is subdivided into eight agro-ecological zones (AEZ), which have been further subdivided into a total of 3976 spatial response units. Annual CO₂-mitigation rates where estimated from the changes in soil organic carbon content comparing 30 years simulations under conventional and zero tillage. Special attention was given to the influence of tillage practices on the losses of organic carbon through soil erosion, and consequently on the calculation of CO₂-mitigation rates. Under conventional tillage, mean carbon losses through erosion in the AEZ were estimated to be up to 0.45 Mg C ha⁻¹ a⁻¹. The apparent CO₂-mitigation rate for the conversion from conventional to zero tillage ranges from 0.08 to 1.82 Mg C ha⁻¹ a⁻¹ in the eight AEZ, if the carbon losses through soil erosion are included in the calculations. However, the higher carbon losses under conventional tillage compared to zero tillage are composed of both, losses through enhanced CO₂ emissions, and losses through intensified soil erosion. The adjusted net CO₂-mitigation rates of zero tillage, subtracting the reduced carbon losses through soil erosion, are between 0.07 and 1.27 Mg C ha⁻¹ a⁻¹ and the estimated net mitigation rate for the entire state amounts to 285 Gg C a⁻¹. This equals to 1045 Gg CO₂-equivalents per year with the cropping patterns in the reference year 2000. The results call attention to the necessity to revise those estimation methods for CO₂-mitigation which are exclusively or predominantly based on the measurements of differential changes in total soil organic carbon without taking into account the tillage effects on carbon losses through soil erosion.