Evaluating sewage-associated JCV and BKV polyomaviruses for sourcing human fecal pollution in a coastal river in Southeast Queensland, Australia

In this study, the host-sensitivity and host-specificity of JC virus (JCV) and BK virus (BKV) polyomaviruses were evaluated by testing wastewater and fecal samples from nine host groups in Southeast Queensland, Australia. The JCV and BKV polyomaviruses were detected in 63 human wastewater samples collected from primary and secondary effluent, suggesting high sensitivity of these viruses in human wastewater. In the 81 animal wastewater and fecal samples tested, 80 were polymerase chain reaction (PCR) negative for the JCV and BKV markers. Only one sample (out of 81 animal wastewater and fecal samples) from pig wastewater was positive. Nonetheless, the overall host-specificity of these viruses to differentiate between human and animal wastewater and fecal samples was 0.99. To our knowledge, this is the first study in Australia that reports on the high specificity of JCV and BKV polyomaviruses. To evaluate the field application of these viral markers for detecting human fecal pollution, 20 environmental samples were collected from a coastal river. In the 20 samples tested, 15% (3/20) and 70% (14/20) samples exceeded the regulatory guidelines for Escherichia coli and enterococci levels for marine waters. In all, five (25%) samples were PCR positive for JCV and BKV, indicating the presence of human fecal pollution in the coastal river investigated. The results suggest that JCV and BKV detection using PCR could be a useful tool for identifying human-sourced fecal pollution in coastal waters.     

Use of the MicroResp™ method to assess pollution-induced community tolerance to metals for lotic biofilms

Understanding the ecological status of aquatic ecosystems and the impact of anthropogenic contamination requires correlating exposure to toxicants with impact on biological communities. Several tools exist for assessing the ecotoxicity of substances, but there is still a need for new tools that are ecologically relevant and easy to use. We have developed a protocol based on the substrate-induced respiration of a river biofilm community, using the MicroResp™ technique, in a pollution-induced community tolerance approach. The results show that MicroResp™ can be used in bioassays to assess the toxicity toward biofilm communities of a wide range of metals (Cu, Zn, Cd, Ag, Ni, Fe, Co, Al and As). Moreover, a community-level physiological profile based on the mineralization of different carbon substrates was established. Finally, the utility of MicroResp™ was confirmed in an in-situ study showing gradient of tolerance to copper correlated to a contamination gradient of this metal in a small river.     

TiO2-assisted degradation of a perfluorinated surfactant in aqueous solutions treated by gliding arc discharge

The plasma–chemical degradation of Forafac 1110, a perfluorinated non-ionic surfactant, in aqueous solutions was investigated using TiO₂ catalysts. The considered plasma was the gliding arc in humid air, which results from an electric discharge at atmospheric pressure and quasi-ambient temperature. Two titanium dioxide powders were used and their synergistic effects on the Forafac degradation were compared. The results were discussed through the evolution of the pH, the conductivity, the fluoride ions concentration released in solutions, the surfactant concentration remaining after treatment and the chemical oxygen demand (COD) measurement.

The combination of the plasma–chemical treatment with heterogeneous catalysis through the use of TiO₂ accelerated the Forafac degradation, since only 60 min was sufficient to remove 96% instead of 360 min needed in the absence of TiO₂. The use of anatase and rutile under the trade-name of Rhodia TiO₂ and Merck TiO₂, respectively, led to different results, because Rhodia TiO₂ has proven to be more efficient. It would seem that the crystalline phase as well as the crystallite size, explain the efficiency of anatase. The advantage of the plasma-catalysis is due to the fact that there is a significant production of the OH^• radicals not only generated by the gliding arc discharge but also by TiO₂.     

Pb in medicinal plants from Jordan

This is the first report on Pb in medicinal herbs from Jordan. Medicinal herbs may present a health risk due to the presence of toxic metals. Seventy-nine dry medicinal plant samples were collected from herbalist shops in Jordan. The plants were digested with acids and analyzed for total Pb concentration using atomic absorption spectrometry. Mean Pb concentration was 15.9 μg/g on a dry weight basis. Our results show that Pb concentrations in Jordan medicinal plants are higher than published data in other countries. The highest level of 33.4 μg Pb/g was determined in Inula viscosa, and the lowest level of 3.0 μg Pb/g was found in Nigella sativa. Calculated daily intakes of Pb of most analyzed herbs were high; most of them are higher than recommended values by the world health organization (WHO). Fortunately, the herbs that contain the highest Pb levels are the less commonly used medicinal herbs in Jordan. The mean Pb levels in the most commonly, commonly and less commonly used herbs in Jordan are 13.9, 13.1 and 16.9 μg Pb/g, respectively. The average dietary intake of Pb through a mixture of these medicinal herbs consumption, assuming 5.0 g herbs is consumed daily, is 79.5 μg Pb/day, which is higher than the maximum daily limit allowed by WHO. We conclude that most of the medicinal plants consumed in Jordan contain significant amount of Pb, and therefore, people of Jordan should not consume large amounts of these herbs.     

Preparation of antibodies and development of an enzyme immunoassay for determination of atrazine in environmental samples

An indirect competitive enzyme-linked immunosorbent assay (ELISA) has been developed and optimized for atrazine determination in soil at different depths (0–10, 10–20, and 20–30 cm) before and after 48 h of application, corn shoot and cow milk samples collected from Dina farm, Egypt. This assay was based on a specific polyclonal antibodies (PAb) raised by immunizing New Zealand rabbits with an immunogen prepared by coupling 3-{4-(ethylamino)-6-(isopropylamino)-1,3,5-triazine-2-yl} thiopropanoic acid to bovine serum albumin (BSA) via N-hydroxysuccinimide (NHS) active ester method. The sensitivity (estimated as IC₅₀value) was 17.5 μg mL^?1 with a detection limit of 0.1 ng mL^?1. The maximum atrazine concentration was found in soil especially in the deepest layer (325 and 890 μg kg^?1 before and after application, respectively). Atrazine concentration in corn shoot was 333.28, μg kg^?1 dry plant, while there was no detectable amount in milk. All samples screened by ELISA were validated by gas chromatography mass spectrometer procedure (GC/MS). Good correlation was achieved between the two methods (r = 0.997 for soil and 0.9814 for plant). This study demonstrates the utility and convenience of the simple, practical and cost–effective ELISA method in the laboratory for analysis of environmental samples. The method is ideal for the rapid screening of large numbers of samples in laboratories where access to GC/MS facilities, is limited or lacking.     

Hyperspectral reflectance response of freshwater macrophytes to salinity in a brackish subtropical marsh

Coastal freshwater wetlands are threatened by increased salinity due to relative sea level rise and reduced freshwater inputs. Remote radiometric measurement of freshwater marsh canopies to detect small shifts in water column salinity would be useful for assessing salinity encroachment. We measured leaf hyperspectral (300-1100 nm) reflectance of freshwater macrophytes (cattail, Typha latifolia and sea oxeye, Borrichia frutescens) in a field study in a subtropical brackish (2.5-4.5 parts per thousand salinity, per thousand) marsh to determine salinity effects on visible and near-infrared spectral band reflectance and to identify reflectance indices sensitive to small (1 per thousand) changes in wetland salinity. For sea oxeye, floating-position water band index [fWBI = R(900)/minimum(R(930) - R(980)), where R(lambda) = reflectance at band lambda], normalized difference vegetation index [NDVI = (R(774) - R(681))/(R(774) + R(681))], and a proposed wetland salinity reflectance ratio (WSRR = R(990)/R(933)) were sensitive to salinity with R2 of 40, 35, and 65%, respectively (p < 0.01). For cattail, NDVI and photochemical reflectance index [PRI = (R(531) - R(570))/(R(570) + R(531))] were sensitive to salinity with R2 of 29 and 33%, respectively (p 相似文献   

Beach impacts of shore-parallel breakwaters backing offshore submerged ridges, Western Mediterranean Coast of Egypt

Seven breakwaters were constructed behind offshore submerged ridges to create a safe area for swimming and recreational activities west of Alexandria on the Mediterranean coast of Egypt. Morphodynamic evaluation was based on the modified Perlin and Dean numerical model (ImSedTran-2D) combined with successive shoreline and beach profile surveys conducted periodically between April 2001 and May 2005. Results reveal insignificant morphologic changes behind the detached breakwaters with slight coastline changes at the down and up-drift beaches of the examined breakwaters (+/-10 m). These changes are associated with salient accretion (20-7 0m) in the low-energy leeside of such structures. Concurrent with this sand accretion is the accumulation of a large amount of benthic algae (Sargassum) in the coastal water of the shadow area of these structures, which in turn have adverse effects on swimmers. Practical measures proposed in this study have successfully helped in mitigating such accumulation of algae in the recreation leeside of the breakwaters. The accumulation of Sargassum, together with the virtual insignificant changes in the up-drift and down-drifts of these structures, is a direct response to both coastal processes and the submerged carbonate ridges. Coastal processes encompass reversal of the directions of long-shore sand transport versus shoreline orientation, the small littoral drift rate and sand deficiency of the littoral zone. The beach response to the breakwaters together with the submerged ridges has also been confirmed by applying the ImSedTran-2D model. Results indicate that submerged ridges play a principal role in the evolution of beach morphology along the west coast of Alexandria. Although the study area is exposed to more than 70% wave exposures, the morphodynamic behavior of the beaches indicates that the submerged ridges act in a similar way as an additional natural barrier together with the artificial detached structures.     

Trends in Intra- and Inter-Annual Temperature Variabilities Across Sudan

Four mean temperature variables, namely maximum (MAX), minimum (MIN), mean (MEAN) and diurnal temperature range (DTR), were considered for 14 selected observational stations throughout Sudan. The objectives were to investigate the seasonal and annual regimes, the seasonal and annual trends, the intra-annual variability (IAV) by the coefficient of variation (CV), and the interrelationships between the temperature variables and percent of possible sunshine. A mounting evidence of daytime and nighttime warming since the 1940s until 2005 is presented. The exception is the dry season which is dominated by daytime cooling attributable to the damping effect of dust haze/storms. Apparently, the progressive drought across inland locations has raised the MAXs, and to a lesser extent the MINs, of the wet season over those for the hot season. Accordingly, maximum rates of 0.451 and 0.336 degrees C decade(-1) were found for the nighttime and daytime temperatures, respectively. The extreme eastern and western locations have been frequently dominated by the warmest trend rates obtained nationwide. The prevalence of significant decreases (increases) of DTR is more apparent in the dry, hot and annual series (wet series). Depending on the temperature variable under consideration, many stations possessed significant trends toward either increased or decreased variability of the within-year monthly values, i.e. IAV. The correlation between the time series of annual CV and extreme values for each of the four temperature variables shows generally that warmer climate in Sudan is associated with higher intra-annual temperature variability and vise versa, i.e. the CV is directly correlated with the highest value within the year, but inversely correlated with the lowest one. The findings of this investigation also indicate that the DTR is directly related to percent of possible sunshine, but the relationship of the latter parameter is not so clear with MAX, MIN and MEAN.