Persistence of testosterone and 17beta-estradiol in soils receiving swine manure or municipal biosolids

Natural and synthetic steroidal hormones can be carried to agricultural soil through fertilization with municipal biosolids, livestock manure, or poultry manure. The persistence and pathways of dissipation of [4-(14)C]-testosterone and of [4-(14)C]-17beta-estradiol in organic-amended soils were investigated using laboratory microcosms. Testosterone dissipation was investigated over a range of amendment concentrations, temperatures, and soil types. Under all conditions the parent compound and transformation products were dissipated within a few days. Addition of swine manure slurry to soil hastened the transformation of testosterone and 17beta-estradiol to the corresponding less hormonally active ketones, 4-androstene-3,17-dione and estrone. Two other testosterone transformation products, 5alpha-androstan-3,17-dione and 1,4-androstadiene-3,17-dione, were also detected. Experiments with sterilized soil and sterilized swine manure slurry suggested that the transformation of (14)C-labeled hormonal parent compounds was mainly caused by microorganisms in manure slurry, while mineralization of the hormones to (14)CO(2) required viable soil microorganisms. Organic amendments transiently inhibited the mineralization of [4-(14)C]-testosterone, perhaps by inhibiting soil microorganisms, or by enhancing sorption and reducing the bioavailability of testosterone or transformation products. Overall, organic amendments influenced the pathways and kinetics of testosterone and estradiol dissipation, but did not increase their persistence.     

Reactions of fish to sound generated by divers' open-circuit underwater breathing apparatus

Observations were made on the influence of underwater divers on the behaviour of fish in Loch Torridon, on the west coast of Scotland. An electronically scanned sonar and a television camera were used to record the behaviour of 4 species common in the loch. These were the cod Gadus morhua (L), the saithe Pollachius virens (L), the pollack P. pollachius (L) and the common dab Limanda limanda (L). These fish were attracted to divers and to a sound source when the recorded noise from an aqualung and demand valve was transmitted into the water. By analysis and by testing different components of the noise it was shown that low frequencies between 30 and 110 Hz, generated by the release of exhaled air, were responsible for the attraction. It is suggested that the fish associated this noise with the presence of food organisms disturbed from the sea bed by the diver and that they had become conditioned to the noise over a period of time.     

Intraspecific geographic-morphological variation patterns in Fucus distichus and F. evanescens

The intraspecific patterns of morphometric variation were examined in Fucus distichus L. and F. evanescens C.Ag., using samples gathered from 49 sites spread across the North Atlantic. Ten characters were measured on each plant. The data were subjected to bivariate regression analyses, canonical correlation analysis and nested analysis of variance (ANOVA). It was shown that the combined effects of the three environmental variables measured for each site (latitude, longitude and exposure) could only explain 23 and 15% respectively of the intraspecific morphometric variation. Inter-individual, within-site differences accounted for a further 62 and 53%. The remaining variation appears to be expressed on a geographic scale of tens of kilometres at most. Thus, the species seem to take the form of fine-scale phenotypic mosaics, superimposed on weak major clines. Such a pattern has not previously been described for any macroalga, although it is known in some angiosperms.     

Genetic structure of camouflage grouper,<Emphasis Type="Italic"> Epinephelus polyphekadion</Emphasis> (Pisces: Serranidae), in the western central Pacific

The objective of the present study was to investigate the population genetic structure of the commercially important camouflage grouper, Epinephelus polyphekadion (Bleeker, 1849), in the western and central Pacific Ocean to improve existing management. Camouflage grouper are widely distributed in the Indo-Pacific and form brief, seasonal, spawning aggregations that are often heavily fished. The present study examined populations sampled in 1997-1998 at five sites in the western central Pacific spanning a geographic distance of ~5,000 km: New Caledonia, Great Barrier Reef, Palau, Marshall Islands, and Pohnpei (Micronesia). Primer pairs were developed to examine genetic variation at three polymorphic microsatellite loci. Cluster analysis, using genetic distance, revealed three regional groupings: (1) Palau, (2) Pohnpei and the Marshall Islands, and (3) the Great Barrier Reef and New Caledonia. Highly significant allele frequency differences were observed among sites. At Pohnpei, significant allele frequency differences in successive years were also apparent, possibly related to genetic variation among cohorts or between local spawning groups. The inter-annual differences at Pohnpei suggest that there may be further genetic structuring over relatively modest distances, a finding relative to determining management units for this commercially valuable species and suggests that future studies need to incorporate possible small-scale temporal or spatial components into study design.     

Molecular diagnosis of a previously unreported predator–prey association in coffee: Karnyothrips flavipes Jones (Thysanoptera: Phlaeothripidae) predation on the coffee berry borer

The coffee berry borer, Hypothenemus hampei, is the most important pest of coffee throughout the world, causing losses estimated at US $500 million/year. The thrips Karnyothrips flavipes was observed for the first time feeding on immature stages of H. hampei in April 2008 from samples collected in the Kisii area of Western Kenya. Since the trophic interactions between H. hampei and K. flavipes are carried out entirely within the coffee berry, and because thrips feed by liquid ingestion, we used molecular gut-content analysis to confirm the potential role of K. flavipes as a predator of H. hampei in an organic coffee production system. Species-specific COI primers designed for H. hampei were shown to have a high degree of specificity for H. hampei DNA and did not produce any PCR product from DNA templates of the other insects associated with the coffee agroecosystems. In total, 3,327 K. flavipes emerged from 17,792 H. hampei-infested berries collected from the field between April and September 2008. Throughout the season, 8.3% of K. flavipes tested positive for H. hampei DNA, although at times this figure approached 50%. Prey availability was significantly correlated with prey consumption, thus indicating the potential impact on H. hampei populations.     

Determining when contamination is pollution - weight of evidence determinations for sediments and effluents

Contamination is simply the presence of a substance where it should not be or at concentrations above background. Pollution is contamination that results in or can result in adverse biological effects to resident communities. All pollutants are contaminants, but not all contaminants are pollutants. Differentiating pollution from contamination cannot be done solely on the basis of chemical analyses because such analyses provide no information on bioavailability or on toxicity. Effects-based measures such as laboratory or field toxicity tests and measures of the status of resident, exposed communities provide key information, but cannot be used independently to determine pollution status. Laboratory studies can be predictive, but are rarely realistic. Measures of resident communities include innate natural variability and cannot easily distinguish between adaptation to contamination (a genetic process) and acclimation (a physiological process that may decrease energy reserves, possibly reducing such critical population-level parameters as reproduction). Finally, contaminant effects may not only be direct but also indirect; predicting such effects requires knowledge of the system under study as well as appropriate use of lines of evidence (LOE) such as toxicity tests directed to key species. Consequently, in sediments, effluents or other inputs/environmental compartments, determining when contamination is or may in future become pollution, requires a weight of evidence (WOE) assessment using different LOE appropriate to the situation under investigation. WOE investigations provide two different types of information: definitive conclusions regarding pollution; or, information as to what additional, investigative studies are necessary for definitive conclusions. Effectively, a WOE assessment comprises an initial screening-level ecological risk assessment (ERA), which may be followed by a detailed-level ERA if key uncertainties need to be resolved.     

Behavioural correlates of urbanisation in the Cape ground squirrel Xerus inauris

Urbanisation critically threatens biodiversity because of habitat destruction and novel selection pressures. Some animals can respond to these challenges by modifying their behaviour, particularly anti-predator behaviour, allowing them to persist in heavily transformed urban areas. We investigated whether the anti-predator behaviour of the Cape ground squirrel Xerus inauris differed in three localities that differed in their level of urbanisation. According to the habituation hypothesis, we predicted that ground squirrels in urban areas would: (a) be less vigilant and forage more; (b) trade-off flight/vigilance in favour of foraging; and (c) have shorter flight initiation distances (FID) when approached by a human observer. Observations were made in winter and summer at each locality. As expected, ground squirrels in urbanised areas were less vigilant and had shorter FIDs but did not trade-off between foraging and vigilance. In contrast, a population in a non-urbanised locality showed greater levels of vigilance, FID and traded-off vigilance and foraging. A population in a peri-urban locality showed mixed responses. Our results indicate that Cape ground squirrels reduce their anti-predator behaviour in urban areas and demonstrate a flexible behavioural response to urbanisation.     

Population structure of red porgy, <Emphasis Type="Italic">Pagrus pagrus</Emphasis>, in the Atlantic Ocean

The red porgy, Pagrus pagrus (L.), is a protogynous sparid associated with reefs and hard bottom habitat throughout the warm-temperate Atlantic Ocean. In this study, the degree of geographic population differentiation in Atlantic populations was examined with microsatellite and mitochondrial DNA markers (mtDNA). Six microsatellite loci were amplified and scored in 690 individuals from the eastern North Atlantic (Crete, Madeira, and Azores), western North Atlantic (North Carolina to Florida, and the eastern Gulf of Mexico), and Brazil. At two loci, fixed allelic differences were found among the three major geographic areas, while frequency differences were observed at three other loci. The DNA of 371 individuals was amplified at the mtDNA control region, and 526 bp were sequenced. Tamura–Nei’s D was used as a measure of nucleotide diversity and divergence: diversity averaged 0.011 within samples, while the corrected divergence averaged 0 between samples within the same area and 0.061 between samples from different areas. Transversion haplotype minimum spanning networks, nucleotide divergence, and F _ST values all show that the western Atlantic samples were more closely related to each other than any was to samples from the eastern North Atlantic. Within the western North Atlantic, no significant population differentiation was observed, and within the eastern North Atlantic, only the Azores sample showed detectable differences from Crete and Madeira. These data indicate general homogeneity within large areas, and deep divisions between these areas. Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible for authorized users.     

Some direct observations on the ecology and behaviour of the Norway lobster Nephrops norvegicus

A detailed investigation of a small area of sea bed occupied by the Norway lobster Nephrops norvegicus (L.) was carried out by diving and television observations at depths of 30 m in Loch Torridon, Scotland. The density of burrows was 1/2 m², but only a proportion of these were occupied by N. norvegicus. Although about 70% of the larger burrows were occupied by N. norvegicus, giving a density of 1 lobster/8 m², very few juveniles (carapace length less than 30 mm) were found in the area. Many of the small burrows were occupied by the gobiid fish Lesueurigobius friesii (Collett). There was evidence that N. norvegicus frequently change their burrows, and fighting for burrows was observed. N. norvegicus remain within their burrows during the day, emerge around sunset to forage for food during the night, and then return to their burrows at dawn. This, and other aspects of their burrowing behaviour, have a marked effect on the commercial trawl catches of N. norvegicus which show large seasonal and diurnal variations in size and sex composition.     

Defended versus undefended home range size of carnivores,ungulates and primates

Summary We tested the hypothesis that undefended home ranges are larger than defended home ranges using data collected from the literature for three groups of mammals. A matched-pairs analysis of populations within species or species within genera showed that undefended home ranges were larger than defended home ranges for carnivores and male ungulates, but not for primates. Primates may have been an exception because they violated a key assumption of the hypothesis, that defence costs increase with the size of the defended area. Undefended home ranges were 5.4 and 15.2 times larger than defended home ranges for carnivores and male ungulates, respectively. Whether or not a home range is defended is an important source of variation that should be included in future studies of home range size. Correspondence to: J.W.A. Grant