Prenatal application of fluorescent in situ hybridization (FISH) for identification of a mosaic Y-chromosome marker,IDIC(Yp)

An amniocentesis was performed at 13.3 weeks' gestation for advanced maternal age. A mosaic sex chromosome pattern was found: of 50 cells examined, 34 had a 45,X karyotype. In 14 cells with a modal number of 46, a recognizable Y was substituted by a small non-fluorescent marker. C-banding identified the marker as an isodicentric in 12 cells. In two cells, the non-fluorescent marker appeared to be monocentric and looked like a non-fluorescent del (Yq), but could have been an isodicentric Y with inactivation of one of the centromeres. Two cells with a modal number of 47 showed two copies of the monocentric marker. Fluorescent in situ hybridization with an alpha satellite Y-specific centromeric probe confirmed the Y-chromosome origin of the markers and allowed for more accurate prenatal diagnostic information.     

Economic assessment of managing processionary moth in pine forests: a case-study in Portugal

This paper assesses the private and social profitability of current strategies for managing processionary moth (Thaumetopoea pityocampa) in Portuguese pine forests, looking at economic and environmental costs and benefits. Costs include the expenses for forest treatment and the social costs of threats to human health (dermatitis amongst others); benefits are assessed in terms of both revenue and social benefits such as carbon fixation and recreation. The evaluation was done using Cost Benefit Analysis (CBA) as an analytical framework. While this tool is currently applied to forest and environmental assessment and specific applications to pest management strategies are to be found in agricultural economics, rather few attempts have been made in the field of forest pest management. In order to assess and compare with--without options, a case-study was analysed for the Setúbal Peninsula, south of Lisbon, an area where extensive stands of maritime pine (Pinus pinaster) grow. The exercise has shown that CBA can be a valuable tool for assessing the economic and social profitability of pest management. The results demonstrate that the loss of revenues in the no-management option is not sufficient to make pest management profitable for private forest owners in the short-term. Conversely, a social profit is gained as pest management minimizes health risks for humans and avoids possible recreational losses.     

Modeling kelp forest distribution and biomass along temperate rocky coastlines

We address the global deficit of data describing kelp forest distribution, relative covers and biomass by testing the ability of species distribution models to predict these attributes at locations where data are currently limited. We integrated biological ground truth data with high-resolution environmental datasets to develop generalized additive models that accurately predict the structure of Laminaria forests within the Bay of Morlaix (48°42′42″N, 3°55′40″W). Forest distribution and proportional covers were predicted using water depth, light availability, wave exposure and sediment dynamics. The biomass of individual kelp species was modeled by supplementing these same variables with measures of seafloor slope and benthic position. Biomass predictions for Laminaria digitata and Laminaria hyperborea contrast the physiological tolerances of these species to light and wave exposure gradients. As a direct management output, we produced high-resolution maps (25 m² grids) that closely match independent field data and provide vital information for marine spatial planning.     

Part I : <Emphasis Type="Italic">a priori</Emphasis> study of erosion and deposition with large eddy simulation of turbulent flow over multiple 2D sandy Gaussian hills

The micro-scale prediction of sand trapping or take-off over hilly terrains is a crucial issue in semi-arid regions for soil depletion. In this context, large eddy simulations around one or several hills are performed in order to provide statistical parameters to characterize the flow at micro-scales and provide data for mesoscale modelling. We focus on the determination of recirculation zones since they play an important role in solid particle erosion or entrapment. A new wall modeling adapted from Huang et al. (J Turbul 17:1–24, 2016) for rough boundary layers is found to improve the prediction of the recirculation zone length downstream of an isolated hill and is used for all the numerical cases presented here. A geometrical parameterization of the recirculation zones is proposed. When the recirculation region is assumed to have an ellipsoidal shape, the total surface of the recirculation can be obtained from this new parameterization and easily extrapolated to more general dune configurations. Numerical results are compared with experiments performed in our laboratory (Simoëns et al. in Procedia IUTAM 17:110–118, 2015) and good agreement is achieved. We explore general aerodynamic cases deduced from the urban canopy scheme of Oke (Energy Build 11:103–113, 1988). In this scheme the momentum and mass exchange between the upper layer and the space between hills is sorted according to the streamwise hill spacing within three basic cases of skimming, wake or isolated flow. The study of the recirculation zones, the mean velocity and Reynolds stress profiles around an isolated or two consecutive hills with different distances shows that the double hill configuration with 3H separation behaves as much as a whole to the upcoming flow. The vortex formed between the crests does not strongly affect the overall evolution of the outer flow. By an a priori prediction of the preferential zones of erosion and accumulation of fictive particles, it is shown that isolated dunes present more deposition and less erosion than two-hill configurations. The results presented in this study will be discussed in the presence of Lagrangian transport of sand particles above 2D Gaussian hills in future work.