An adaptive reduction algorithm for efficient chemical calculations in global atmospheric chemistry models

We present a computationally efficient adaptive method for calculating the time evolution of the concentrations of chemical species in global 3-D models of atmospheric chemistry. Our strategy consists of partitioning the computational domain into fast and slow regions for each chemical species at every time step. In each grid box, we group the fast species and solve for their concentration in a coupled fashion. Concentrations of the slow species are calculated using a simple semi-implicit formula. Separation of species between fast and slow is done on the fly based on their local production and loss rates. This allows for example to exclude short-lived volatile organic compounds (VOCs) and their oxidation products from chemical calculations in the remote troposphere where their concentrations are negligible, letting the simulation determine the exclusion domain and allowing species to drop out individually from the coupled chemical calculation as their production/loss rates decline. We applied our method to a 1-year simulation of global tropospheric ozone-NO_x-VOC-aerosol chemistry using the GEOS-Chem model. Results show a 50% improvement in computational performance for the chemical solver, with no significant added error.     

Risk ranking of multiple-POPs in detritivorous fish from the Río de la Plata

To evaluate the bioaccumulation and the risk associated to consumption of lipid-rich detritivorous fish, a comprehensive set of organic pollutants (n = 213) including polychlorinated biphenyls (PCBs), dioxin like PCBs (dlPCBs), chlorinated pesticides (CHLPs), chlorobenzenes (CBzs), polybrominated diphenyl ethers (PBDEs), polychlorinated dibenzo dioxins and furans (PCDD/F), resolved (ALI) and unresolved aliphatic hydrocarbons (UCM) and linear alkyl benzenes (LABs) were analyzed in Sábalo fish (Prochilodus lineatus) collected in the polluted Metropolitan Buenos Aires coast and in migrating specimens. Fatty fish muscles (lipids: 74 ± 9.3% dry weight) contained homogeneous (24-51% variability) and very high-concentrations of organic pollutants ranging from 60 to 1300 μg g⁻¹ fresh weight (fw) ALI + UCM; 10-40 μg g⁻¹ fw LABs and PCBs; 0.1-1 μg g⁻¹ fw dlPCBs, DDTs, chlordanes, CBzs and PBDEs; 0.01-0.1 μg g⁻¹ fw mirex, endosulfans, aldrin, dieldrin, endrin and 0.07-0.2 ng g⁻¹ PCDD/F. Total toxicity equivalents (TEQs) ranged from 60 to 395 pg g⁻¹ fw (34 ± 17 and 213 ± 124 pg g⁻¹ TEQs for PCDD/F and dlPCBs respectively). These are among the highest concentrations reported for fish and point out the remarkable ability of Sábalo to feed on anthropogenic organic-enriched particles and tolerate a high pollutant load. Contaminant signatures show partial alteration with still abundant lower molecular weight components indicating that fish feeds directly in the outfalls. Consumption limits based on reference doses ranged from 0.1 (PCBs) to >12 000 g d⁻¹ (endosulfan) allowing a comprehensive risk-based ranking of contaminants in this long-range migrating, detritivorous fish.     

Association between Levels of Fine Particulate and Emergency Visits for Pneumonia and other Respiratory Illnesses among Children in Santiago,Chile

ABSTRACT

Recent evidence has implicated the fine fraction of particulate as the major contributor to the increase in mortality and morbidity related to particulate ambient levels. We therefore evaluated the impact of daily variation of ambient PM_2.5 and other pollutants on the number of daily respiratory-related emergency visits (REVs) to a large pediatric hospital of Santiago, Chile. The study was conducted from February 1995 to August 1996. Four monitoring stations from the network of Santiago provided air pollution data. The PM2.5 24-hr average ranged from 10 to 111 μg/m³ during September to April (warm months) and from 10 to 156 μg/m³ during May to August (cold months). Other contaminants (ozone (O₃), nitrogen dioxide (NO₂), and sulfur dioxide (SO₂)) were, in general, low during the study period. The increase in REVs was significantly related to PM₁₀ and PM_2.5 ambient levels, with the relationship between PM_2.5 levels and the number of REVs the stronger. During the cold months, an increase of 45 ìg/m³ in the PM_2.5 24-hr average was related to a 2.7% increase in the number of REVs (95% CI, 1.1–4.4%) with a two-day lag, and to an increase of 6.7% (95% CI, 1.7–12.0%) in the number of visits for pneumonia with a three-day lag. SO₂ and NO₂ were also related to REVs. We conclude that urban air pollutant mixture, particularly fine particulates, adversely affect the respiratory health of children residing in Santiago.     

Use of polyvinyl chloride pipes (PVC) as potential artificial shelters for amphibians in a coastal plain forest of southeastern Brazil

We studied the use of polyvinil chloride pipes (PVC pipes) by frogs as artificial shelters in a Coastal Plain forest in the Vale Natural Reserve, north of Espírito Santo state, southeastern Brazil from June 2015 to May 2016. We used 14 plots distributed in the Coastal Plain Forest following the RAPELD methodology of sampling. The frogs were sampled in transects along the plots, using the active search method, with visual and auditory sampling. We recorded two species of frogs (Aparasphenodon brunoi and Scinax argyreornatus) using PVC pipes as shelters in the plots in the Forest. Of the 468 PVC pipes established along plots, 38 of them (8.1%) were used as shelter by the frogs. For both frog species, about 33% of microhabitats used in the forest were the interior of PVC pipes. We concluded that the PVC pipes might constitute artificial shelters for at least two of the frog species living in the community of the Coastal Plain Forest, potentially being of relevance in conservation programs. In altered areas and those in which there has been the loss of types of microhabitats, the addition of these PVC pipes as artificial shelters may represent additional and complementary microhabitats to keep or increase the population stocks of arboreal and semi-arboreal frog species and having a size that allow them entering the shelter. These artificial shelters can play an important role in conservation of these frogs in fragmented areas where the availability of the microhabitats of these frog species were locally reduced.     

Community-based forest management in the Yungas biosphere reserve, Northern Argentina

The purpose of this paper is to discuss a methodology for the implementation of a participative plan for forest use and management in a rural community. We present an experience carried out in an aboriginal community located in the “Yungas biosphere reserve” in Northern Argentina. We developed a methodology to work with the community to assess the quality of the forest resources and to find out the causes of degradation. We worked at three levels: the community council, the community, and the school. The community has a very short-term vision. The setup, the feasibility, and the implementation of the plan is highly dependent on the willingness of the community to participate. It is so far the first attempt, in Yungas region, to develop a multi-level methodology to work with local communities to implement a forest-management plan. Findings and recommendations could be useful for others who would like to work in similar contexts.     

Hot emission model for mobile sources: application to the metropolitan region of the city of Santiago, Chile

Depending on the final application, several methodologies for traffic emission estimation have been developed. Emission estimation based on total miles traveled or other average factors is a sufficient approach only for extended areas such as national or worldwide areas. For road emission control and strategies design, microscale analysis based on real-world emission estimations is often required. This involves actual driving behavior and emission factors of the local vehicle fleet under study. This paper reports on a microscale model for hot road emissions and its application to the metropolitan region of the city of Santiago, Chile. The methodology considers the street-by-street hot emission estimation with its temporal and spatial distribution. The input data come from experimental emission factors based on local driving patterns and traffic surveys of traffic flows for different vehicle categories. The methodology developed is able to estimate hourly hot road CO, total unburned hydrocarbons (THCs), particulate matter (PM), and NO(x) emissions for predefined day types and vehicle categories.     

Sources, distribution and variability of airborne trace metals in La Plata City area, Argentina

Airborne particulate trace metals have been measured bimonthly during day and night hours in four permanent stations located in residential, industrial and commercial sectors of La Plata City region, to characterize the sources and variability of atmospheric inputs. Airborne trace metal regional averages (Pb 64 +/- 62, Cu 30 +/- 27, Mn 26 +/- 20, Zn 273 +/- 227, Fe 1183 +/- 838, Ca 5343 +/- 3614, Mg 1472 +/- 967, Cr 4.3 +/- 2.4, Ni 3.2 +/- 3.5 and Cd 0.41 +/- 0.42 ng/m3) are comparable to the values reported for not grossly polluted cities and below the general trend described for urban particulates. Two- and three-way analysis of variance and variance components tests (P < 0.05) were performed to assess the contribution of the diurnal (day vs. night), spatial (inter-station) and temporal (inter-month) components of variability. Trace metal concentrations followed the behavior of total suspended particles with higher concentrations during the day and at the Downtown station and lower at the Residential site. In general, spatial and temporal variations prevailed over diurnal differences. Spatial differences were clearly most significant for Pb, which presented higher values at the Downtown site reflecting the importance of motor exhaust inputs. In contrast, diurnal differences were more important for Mn due to increased dust resuspension during day hours. A seasonal trend with concentrations usually increasing during winter months and decreasing in spring-summer was also detected. Enrichment factors (EF) were calculated to evaluate anthropogenic versus natural element sources. High EF (21-376) were obtained for Pb, Zn, Cd and Cu reflecting the importance of anthropic inputs. The comparison with EF calculated for high-emitting vehicle particle emissions indicated that motor exhausts are the most important source of these elements in La Plata region. In contrast, the EF calculated for Mn, Cr, Ni, Ca and Mg were low (1.3-7.5) suggesting chiefly natural sources, i.e. soil-derived dusts.     

Crab herbivory regulates plant facilitative and competitive processes in Argentinean marshes

Interactions among plants have been hypothesized to be context dependent, shifting between facilitative and competitive in response to variation in physical and biological stresses. This hypothesis has been supported by studies of the importance of positive and negative interactions along abiotic stress gradients (e.g., salinity, desiccation), but few studies have tested how variation in biotic stresses can mediate the nature and strength of plant interactions. We examined the hypothesis that herbivory regulates the strength of competitive and facilitative interactions during succession in Argentinean marshes dominated by Spartina densiflora and Sarcocornia perennis. Spartina densiflora is preferred by the dominant herbivore in the system, the crab Chasmagnathus granulatus. We experimentally manipulated crab herbivory, plant structure, and shade, and we found that, when herbivory was low in the spring and summer, competitive interactions between plants were dominant, but in the fall, when herbivory was highest, facilitative interactions dominated, and Spartina densiflora survival was completely dependent upon association with Sarcocornia perennis. Moreover, experimental removal of Sarcocornia perennis across recently disturbed tidal flats revealed that, while Sarcocornia perennis positively affected small Spartina densiflora patches by decreasing herbivory, as patch size increases and they can withstand the impact of herbivory, competitive interactions predominated and Spartina densiflora ultimately outcompeted Sarcocornia perennis. These results show that herbivory can mediate the balance between facilitative and competitive processes in vascular plant communities and that the strength of consumer regulation of interactions can vary seasonally and with patch size.     

Locomotion versus spawning: escape responses during and after spawning in the scallop Argopecten purpuratus

The energetic cost of spawning and the endogenous factors that modulate spawning could modify escape response performance, leading to a conflict between the requirements of two fundamental components of fitness: reproduction and survival. We examined whether spawning changed force production during escape responses by the functionally hermaphroditic scallop, Argopecten purpuratus, and whether the response of smooth (tonic) and striated (phasic) muscles differed. Force production during escape responses by mature scallops was compared before induction of spawning, during spawning and after completion of spawning. Maximum tonic force and the area under the force curve (total force recorded) were diminished during gamete release, whereas phasic force production (maximum and mean force) increased after spawning was completed. The number and frequency of phasic contractions did not change during the spawning process, suggesting that spawning did not limit fuel availability for phasic contractions. The decrease in tonic force during spawning and the increased phasic force production after spawning may reflect changes in monoamine levels during gamete release. Whereas the spawning process modified force production during escape responses, the changes would, if anything, enhance escape performance during an initial encounter between a scallop and a predatory sea star.     

A global evaluation of metabolic theory as an explanation for terrestrial species richness gradients

We compiled 46 broadscale data sets of species richness for a wide range of terrestrial plant, invertebrate, and ectothermic vertebrate groups in all parts of the world to test the ability of metabolic theory to account for observed diversity gradients. The theory makes two related predictions: (1) In-transformed richness is linearly associated with a linear, inverse transformation of annual temperature, and (2) the slope of the relationship is near -0.65. Of the 46 data sets, 14 had no significant relationship; of the remaining 32, nine were linear, meeting prediction 1. Model I (ordinary least squares, OLS) and model II (reduced major axis, RMA) regressions then tested the linear slopes against prediction 2. In the 23 data sets having nonlinear relationships between richness and temperature, split-line regression divided the data into linear components, and regressions were done on each component to test prediction 2 for subsets of the data. Of the 46 data sets analyzed in their entirety using OLS regression, one was consistent with metabolic theory (meeting both predictions), and one was possibly consistent. Using RMA regression, no data sets were consistent. Of 67 analyses of prediction 2 using OLS regression on all linear data sets and subsets, two were consistent with the prediction, and four were possibly consistent. Using RMA regression, one was consistent (albeit weakly), and four were possibly consistent. We also found that the relationship between richness and temperature is both taxonomically and geographically conditional, and there is no evidence for a universal response of diversity to temperature. Meta-analyses confirmed significant heterogeneity in slopes among data sets, and the combined slopes across studies were significantly lower than the range of slopes predicted by metabolic theory based on both OLS and RMA regressions. We conclude that metabolic theory, as currently formulated, is a poor predictor of observed diversity gradients in most terrestrial systems.