Y chromosome detection by Real Time PCR and pyrophosphorolysis-activated polymerisation using free fetal DNA isolated from maternal plasma

Objectives To validate the use of Real Time PCR, a widely used technique that can detect very low levels of Y chromosomal sequence, and to assess the use of a highly sensitive PCR technique, pyrophosphorolysis-activated polymerisation (PAP), for fetal sex determination using free fetal DNA (ffDNA). Methods The fetal sex was determined by Real Time PCR in 58 pregnancies using ffDNA isolated from maternal plasma. In parallel with the Real Time PCR experiments, the presence of Y chromosome sequence was also determined using PAP on 54 isolated ffDNA samples. Results Both techniques detected Y chromosome sequence at very low levels with 98% specificity and 100% sensitivity (Real Time n = 44, PAP n = 54). Furthermore, the PAP technique was shown to be more robust than the Real Time PCR as none of the samples tested failed to meet the acceptance criteria. Combining the two techniques for male fetal sex detection from maternal blood plasma increases the sensitivity and specificity to 100% in this series. Conclusions This study shows that both Real Time PCR and PAP can be used for Y chromosome detection on ffDNA. Furthermore, by using PAP in combination with Real Time PCR more reliable early prenatal sexing can be performed using ffDNA. Copyright © 2007 John Wiley & Sons, Ltd.     

Microbial biomass yield and turnover in soil biodegradation tests: carbon substrate effects

Most of the standardized biodegradation tests used to assess the ultimate biodegradation of environmentally degradable polymers are based solely on the determination of net evolved carbon dioxide. However, under aerobic conditions, it has to be considered that heterotrophic microbial consortia metabolize carbon substrates both to carbon dioxide and in the production of new cell biomass. It is generally accepted that in the relatively short term, 50% of the carbon content of most organic substrates is converted to CO₂, with the remaining carbon being assimilated as biomass or incorporated into humus. The latter is particularly important when the metabolism of the organic matter occurs in a soil environment. A straightforward relationship between the free-energy content of a carbon substrate (expressed as the standard free-energy of combustion) and its propensity for conversion to new microbial biomass rather than mineralization to CO₂ has been established. This can potentially lead to underestimation of biodegradation levels of test compounds, especially when they consist of carbon in a fairly low formal oxidation state and relatively high free-energy content. In the present work, the metabolism of different kind of carbon substrates, especially in soil, is reviewed and compared with our own experimental results from respirometric tests. The results show that conversion of highly oxidized materials, such as the commonly used reference materials, cellulose or starch, to CO₂ may be significantly overestimated. The addition of glucosidic material to soil leads to greatly increased respiration and is accompanied by a very low conversion to biomass or humic substances. In contrast, relatively less oxidized substrates metabolize more slowly to give both CO₂ and biomass to an extent which may be significantly underestimated if glucosidic materials are used as the reference. The need for an overall carbon balance taking into account both the carbon immobilized as biomass and that volatized as CO₂ must be considered in standard respirometric procedures for assessing the biodegradability of slowly degrading macromolecules.     

Electricity supply industry in North America

This paper describes the electricity supply system in the USA and Canada based on an analysis of the performance characteristics of the North America Electric Reliability Councils which regulate the interlinked generation capabilities of the two countries. It is shown that whereas the national average efficiency of production and delivery of electricity in the USA is 32%, the actual value varies between 22% and 47% depending on geographical location. For Canada, the range is 32% to 68% with a national average of 43%. A detailed analysis of the dependence of each area on the different primary fuels is also given.     

The Chemistry of Throughfall, Stemflow and Soil Water Beneath Oak Woodland and Moorland Vegetation in Upland Wales

The chemistry of bulk precipitation, throughfall, stemflow and soil waters beneath an oak wood (Quercus petraea) canopy and soil waters under moorland vegetation were measured at two sites on acid brown podzolic soils near Llyn Brianne in rural mid-Wales, UK. Between March 1986 and November 1988, precipitation was 4354 mm and annual interception losses from the oak canopy averaged 13% of incident precipitation. Throughfall and stemflow were more acid and concentrations of most solutes were increased 2- to 4-fold compared with bulk precipitation. Nitrate was the only solute retained within the tree canopy. Throughfall collected beneath patches of bracken on the forest floor was less acidic but contained substantially higher concentrations of major ions than bulk precipitation and oak throughfall. the moorland soil was more acidic, contained more exchangeable calcium but less exchangeable aluminium and potassium than the woodland soil. Soil waters beneath both vegetation types were acidic (mean pH range 4.5-4.9) and dominated by sodium and chloride. with the exception of calcium, soil water solute concentrations were greater beneath oak. These differences are ascribed to larger atmospheric inputs beneath the oak canopy compared with the shorter grasses, combined with the effect of differences in nutrient dynamics and water fluxes. Variations in soil water aluminium chemistry are explained in terms of ion exchange and podzolisa-tion processes. the water quality implications of increased upland afforestation of moorland by broadleaved trees are discussed.     

A daily diary study of affective responses to psychological contract breach and exceeded promises

The psychological contract has been viewed as an explanatory framework for understanding the employment relationship, and is regarded by some researchers as central in understanding employee attitudes and behavior. Despite the importance ascribed to the psychological contract, it remains theoretically underdeveloped and has received limited empirical attention. This study takes a new approach to researching the psychological contract, through the use of daily diaries, and addresses a number of fundamental questions regarding its nature. Results show that both broken and exceeded promises occur regularly and in relation to virtually any aspect of work, that the importance of the promise contributes significantly to emotional reactions following broken and exceeded promises, and that the psychological contract is an important concept for understanding everyday fluctuations in emotion and daily mood. Copyright © 2002 John Wiley & Sons, Ltd.     

HYDROCLIMATIC VARIABILITY IN THE ROCKY MOUNTAINS1

ABSTRACT: The spatial and temporal variability of hydroclimatic elements were investigated in the central and northern Rocky Mountains (Colorado, Idaho, Montana, Utah, and Wyoming) during the 1951–1985 period. The three hydroclimatic elements studied were total water-year (October 1-September 30) streamflow (ST), winter (October 1-March 31) accumulated precipitation (PR), and April 1 snowpack (SN). An analysis of 14 virgin watersheds showed wide spatial djfferences in the temporal variability of SN, PR, and ST, and these were found to be caused largely by basin exposure to moist air flows. The more stable (low variability) basins were those exposed to prevailing northerly to westerly flow, while unstable (high variability) basins were exposed to occasional southwesterly to southeasterly moist flow. Snowpack was the better indicator of ST in 11 of the 14 watersheds, explaining 37 to 87 percent of the ST variance. Analysis of the spatial variability, based on all SN and PR data from across the study area, revealed 11 discrete climatic regions. Both SN and PR exhibited coherent regions of stable and unstable temporal variability. The average variability between stable and unstable regions differed by a factor of two, and the differences were best explained by the exposure of the mountain barrier to moist air flows.     

The role of colonization in determining spatial patterns of Proscoloplos bondi sp. nov. (Orbiniidae: Annelida) in coralline algal turf

We describe Proscoloplos bondi sp. nov., a new species of orbinid polychaete found in coralline algal turf on rocky intertidal shores near Sydney, Australia. We used field sampling to describe P. bondi's patterns of spatial and temporal variation on a number of shores. P. bondi was significantly more abundant in low- than in mid-shore areas (ANOVA, P<0.05), but local populations were extremely variable in space and time. Despite extensive sampling, we did not find evidence of sexual reproduction in P. bondi, but commonly observed worms with regenerating heads and tails, which indicated the importance of asexual reproduction. We, therefore, tested the hypothesis that adult colonization contributes to its patterns of abundance. First, patches of artificial turf were placed near to and away from natural coralline turf and sampled after 2, 4 and 12 months. Generally, populations established themselves more quickly in patches of new habitat directly adjacent to coralline turf than in patches that were isolated. Second, patches of turf were deployed for 2-week periods in low- and mid-shore areas (repeated four times). Proscoloplos bondi were found significantly more often in patches in low-shore areas than in mid-shore areas and at some sites more than others (ANOVA, P<0.05), demonstrating the importance of adult colonization in determining patterns of abundance. Overall, the limited dispersal from spatially and temporally ephemeral populations of P. bondi combined with the patchiness of coralline turfs suggest that metapopulation dynamics may be important in the persistence of P. bondi on rocky shores.Communicated by G.F. Humphrey, Sydney