Impact of riparian zone protection from cattle on nutrient, bacteria, F-coliphage, and loading of an intermittent stream

This 5-yr study compared, via an upstream-downstream experimental design, nutrient and microbial water quality of an intermittent stream running through a small pasture (～2.5 animals ha) where cattle are restricted from the riparian zone (restricted cattle access [RCA]) and where cattle have unrestricted access to the stream (unrestricted cattle access [URCA]). Fencing in the RCA excluded pasturing cattle to within ～3 to 5 m of the stream. Approximately 88% (26/32) of all comparisons of mean contaminant load reduction for lower, higher, and all stream flow conditions during the 5-yr study indicated net contaminant load reductions in the RCA; for the URCA, this percentage was 38% (12/32). For all flow conditions, mean percent load reductions in the RCA for nutrients and bacteria plus F-coliphage were 24 and 23%, respectively. These respective percentages for the URCA were -9 and -57% (positive values are reductions; negative values are increases). However, potentially as a result of protected wildlife habitat in the RCA, the mean percent load reduction for for "all flow" was -321% for the RCA and 60% for the URCA; for , these respective percentages were -209% (RCA) and 73% (URCA). For "all flow" situations, mean load reductions for the RCA were significantly greater ( < 0.1) than those from the URCA for NH-N, dissolved reactive phosphorus (DRP), total coliform, , and . For "high flow" situations, mean load reductions were significantly greater for the RCA for DRP, total coliform, and . For "low flow" conditions, significantly greater mean load reductions were in favor of the RCA for DRP, total P, total coliforms, fecal coliforms, , and . In no case were mean pollutant loads in the URCA significantly higher than RCA pollutant loads. Restricting pasturing livestock to within 3 to 5 m of intermittent streams can improve water quality; however, water quality impairment can occur if livestock have unrestricted access to a stream.     

Solute transport in crystalline rocks at Äspö — II: Blind predictions, inverse modelling and lessons learnt from test STT1

Based on the results from detailed structural and petrological characterisation and on up-scaled laboratory values for sorption and diffusion, blind predictions were made for the STT1 dipole tracer test performed in the Swedish Äspö Hard Rock Laboratory. The tracers used were nonsorbing, such as uranine and tritiated water, weakly sorbing ²²Na⁺, ⁸⁵Sr²⁺, ⁴⁷Ca²⁺and more strongly sorbing ⁸⁶Rb⁺, ¹³³Ba²⁺, ¹³⁷Cs⁺.Our model consists of two parts: (1) a flow part based on a 2D-streamtube formalism accounting for the natural background flow field and with an underlying homogeneous and isotropic transmissivity field and (2) a transport part in terms of the dual porosity medium approach which is linked to the flow part by the flow porosity.The calibration of the model was done using the data from one single uranine breakthrough (PDT3). The study clearly showed that matrix diffusion into a highly porous material, fault gouge, had to be included in our model evidenced by the characteristic shape of the breakthrough curve and in line with geological observations.After the disclosure of the measurements, it turned out that, in spite of the simplicity of our model, the prediction for the nonsorbing and weakly sorbing tracers was fairly good. The blind prediction for the more strongly sorbing tracers was in general less accurate. The reason for the good predictions is deemed to be the result of the choice of a model structure strongly based on geological observation. The breakthrough curves were inversely modelled to determine in situ values for the transport parameters and to draw consequences on the model structure applied. For good fits, only one additional fracture family in contact with cataclasite had to be taken into account, but no new transport mechanisms had to be invoked. The in situ values for the effective diffusion coefficient for fault gouge are a factor of 2–15 larger than the laboratory data. For cataclasite, both data sets have values comparable to laboratory data. The extracted K_d values for the weakly sorbing tracers are larger than Swedish laboratory data by a factor of 25–60, but agree within a factor of 3–5 for the more strongly sorbing nuclides. The reason for the inconsistency concerning K_ds is the use of fresh granite in the laboratory studies, whereas tracers in the field experiments interact only with fracture fault gouge and to a lesser extent with cataclasite both being mineralogically very different (e.g. clay-bearing) from the intact wall rock.     

Detection of Potential Infectious Enteric Viruses in Fresh Produce by (RT)-qPCR Preceded by Nuclease Treatment

Foodborne illnesses associated with contaminated fresh produce are a common public health problem and there is an upward trend of outbreaks caused by enteric viruses, especially human noroviruses (HNoVs) and hepatitis A virus (HAV). This study aimed to assess the use of DNase and RNase coupled to qPCR and RT-qPCR, respectively, to detect intact particles of human adenoviruses (HAdVs), HNoV GI and GII and HAV in fresh produce. Different concentrations of DNase and RNase were tested to optimize the degradation of free DNA and RNA from inactivated HAdV and murine norovirus (MNV), respectively. Results indicated that 10 µg/ml of RNase was able to degrade more than 4 log₁₀ (99.99%) of free RNA, and 1 U of DNase degraded the range of 0.84–2.5 log₁₀ of free DNA depending on the fresh produce analysed. The treatment with nucleases coupled to (RT)-qPCR was applied to detect potential infectious virus in organic lettuce, green onions and strawberries collected in different seasons. As a result, no intact particles of HNoV GI and GII were detected in the 36 samples analysed, HAdV was found in one sample and HAV was present in 33.3% of the samples, without any reasonable distribution pattern among seasons. In conclusion, RT-qPCR preceded by RNase treatment of eluted samples from fresh produce is a good alternative to detect undamaged RNA viruses and therefore, potential infectious viruses. Moreover, this study provides data about the prevalence of enteric viruses in organic fresh produce from Brazil.     

Origin and spatial–temporal distribution of faecal bacteria in a bay of Lake Geneva, Switzerland

The origin and distribution of microbial contamination in Lake Geneva's most polluted bay were assessed using faecal indicator bacteria (FIB). The lake is used as drinking water, for recreation and fishing. During 1 year, water samples were taken at 23 points in the bay and three contamination sources: a wastewater treatment plant (WWTP), a river and a storm water outlet. Analyses included Escherichia coli, enterococci (ENT), total coliforms (TC), and heterotrophic plate counts (HPC). E. coli input flux rates from the WWTP can reach 2.5 x 10(10) CFU/s; those from the river are one to three orders of magnitude lower. Different pathogenic Salmonella serotypes were identified in water from these sources. FIB levels in the bay are highly variable. Results demonstrate that (1) the WWTP outlet at 30 m depth impacts near-surface water quality during holomixis in winter; (2) when the lake is stratified, the effluent water is generally trapped below the thermocline; (3) during major floods, upwelling across the thermocline may occur; (4) the river permanently contributes to contamination, mainly near the river mouth and during floods, when the storm water outlet contributes additionally; (5) the lowest FIB levels in the near-surface water occur during low-flow periods in the bathing season.     

Assessing the nature of the combined effects of copper and zinc on estuarine infaunal communities

Elevated levels of copper and zinc in sediment have been shown to adversely affect estuarine infauna. We investigated the additivity of the combined effects of copper and zinc on infaunal recolonisation through a manipulative field experiment in Orewa estuary, New Zealand, using defaunated sediment discs treated with these metals. The nature of their combined effects varied among infaunal taxa and the particular variables being examined. Additive effects were detected for species richness, for the mean log abundances of the polychaetes Prionospio sp. and Scoloplos cylindrifer and for the multivariate response of the community as a whole. Antagonistic effects were detected for the mean log abundances of total infauna and the polychaete Heteromastus sp. Characterising the potentially interactive nature of the combined effects of multiple heavy metals is essential in order to build predictive models of future environmental impacts of metal accumulation in estuarine sediments.     

Transitions in high-Arctic vegetation growth patterns and ecosystem productivity tracked with automated cameras from 2000 to 2013

Climate-induced changes in vegetation phenology at northern latitudes are still poorly understood. Continued monitoring and research are therefore needed to improve the understanding of abiotic drivers. Here we used 14 years of time lapse imagery and climate data from high-Arctic Northeast Greenland to assess the seasonal response of a dwarf shrub heath, grassland, and fen, to inter-annual variation in snow-cover, soil moisture, and air and soil temperatures. A late snow melt and start of growing season is counterbalanced by a fast greenup and a tendency to higher peak greenness values. Snow water equivalents and soil moisture explained up to 77 % of growing season duration and senescence phase, highlighting that water availability is a prominent driver in the heath site, rather than temperatures. We found a significant advance in the start of spring by 10 days and in the end of fall by 11 days, resulting in an unchanged growing season length. Vegetation greenness, derived from the imagery, was correlated to primary productivity, showing that the imagery holds valuable information on vegetation productivity.     

Development of imposex and accumulation of butyltin in the tropical muricid Thais distinguenda transplanted to a TBT contaminated site

The muricid Thais distinguenda (ca. 1,300 individuals) was collected from a pristine island in the Andaman Sea and tagged prior to translocation to an area of intense shipping activities. A minimum of 50 tagged individuals were recaptured 1, 2, 3, 5, 6, 7, 8 and 12 months after transplantation. The animals were separated into small (< or = 25 mm) and big (>25 mm) specimens based on total shell length and both incidence of imposex and body burden of butyltin (BT) were determined. After 3 months 16.7% of the small size and none of the big size class had developed imposex. After 5 months the incidence of imposex in the big and small size classes increased steadily with time reaching 86.4 and 80%, respectively after 1 year. Time after transplantation was significantly correlated with the incidence of imposex for the big size class (Spearman Rs=1; P=0.008); RPLI (Spearman Rs=1; P=0.008) and VDSI (Spearman Rs=1; P=0.008); and the small size class: incidence of imposex (Spearman Rs=1; P=0.006); RPLI (Spearman Rs=1; P=0.006) and VDSI (Spearman Rs=1: P=0.007). The development of imposex was not significantly related to body size after five months (chi square P<0.001). The body burden of tributyltin was not significantly different between the two size classes (paired t-test ) but the smaller animals had significantly higher concentrations of both dibutyltin (DBT; P<0.005) and monobutyltin (MBT; P<0.001). The use of transplantation experiments in addition to imposex surveys and analysis of body burden of tributyltin (TBT) can enhance the interpretation of the results and understanding of the time scale involved with the development of imposex.     

Sexual selection in darkness? Female mating preferences in surface- and cave-dwelling Atlantic mollies,<Emphasis Type="Italic"> Poecilia mexicana</Emphasis> (Poeciliidae,Teleostei)

In many species, females prefer large males as mating partners. Male size can easily be determined visually. We examined how such mate choice evolves when individuals are deprived of sensory information previously used to determine male quality. Using a cave-dwelling population of Atlantic mollies, Poecilia mexicana, as a model, we asked whether the female mating preference for large male body size still occurs in this cave fish, or whether it is lacking due to the absence of visual communication in the cave environment. In simultaneous choice tests we compared the time females spent with a large or a small male. In the river-dwelling and cave-dwelling fish, as well as the population originating from the cave entrance, we found a significant preference for large males in light. Hence, the ancestral mating preference of surface-dwelling mollies has been maintained during the evolution of the cave form. However, only the cave population exhibited a mating preference in darkness. Determination of male body size appears to have been taken over by a non-visual sensory system, probably the lateral line.Communicated by K. Lindström     

Solute transport in crystalline rocks at Aspö--II: blind predictions,inverse modelling and lessons learnt from test STT1

Based on the results from detailed structural and petrological characterisation and on up-scaled laboratory values for sorption and diffusion, blind predictions were made for the STT1 dipole tracer test performed in the Swedish Asp? Hard Rock Laboratory. The tracers used were nonsorbing, such as uranine and tritiated water, weakly sorbing 22Na(+), 85Sr(2+), 47Ca(2+)and more strongly sorbing 86Rb(+), 133Ba(2+), 137Cs(+). Our model consists of two parts: (1) a flow part based on a 2D-streamtube formalism accounting for the natural background flow field and with an underlying homogeneous and isotropic transmissivity field and (2) a transport part in terms of the dual porosity medium approach which is linked to the flow part by the flow porosity. The calibration of the model was done using the data from one single uranine breakthrough (PDT3). The study clearly showed that matrix diffusion into a highly porous material, fault gouge, had to be included in our model evidenced by the characteristic shape of the breakthrough curve and in line with geological observations. After the disclosure of the measurements, it turned out that, in spite of the simplicity of our model, the prediction for the nonsorbing and weakly sorbing tracers was fairly good. The blind prediction for the more strongly sorbing tracers was in general less accurate. The reason for the good predictions is deemed to be the result of the choice of a model structure strongly based on geological observation. The breakthrough curves were inversely modelled to determine in situ values for the transport parameters and to draw consequences on the model structure applied. For good fits, only one additional fracture family in contact with cataclasite had to be taken into account, but no new transport mechanisms had to be invoked. The in situ values for the effective diffusion coefficient for fault gouge are a factor of 2-15 larger than the laboratory data. For cataclasite, both data sets have values comparable to laboratory data. The extracted K(d) values for the weakly sorbing tracers are larger than Swedish laboratory data by a factor of 25-60, but agree within a factor of 3-5 for the more strongly sorbing nuclides. The reason for the inconsistency concerning K(d)s is the use of fresh granite in the laboratory studies, whereas tracers in the field experiments interact only with fracture fault gouge and to a lesser extent with cataclasite both being mineralogically very different (e.g. clay-bearing) from the intact wall rock.