Effect of birch (Betula spp.) and associated rhizoidal bacteria on the degradation of soil polyaromatic hydrocarbons, PAH-induced changes in birch proteome and bacterial community

Two birch clones originating from metal-contaminated sites were exposed for 3 months to soils (sand-peat ratio 1:1 or 4:1) spiked with a mixture of polyaromatic hydrocarbons (PAHs; anthracene, fluoranthene, phenanthrene, pyrene). PAH degradation differed between the two birch clones and also by the soil type. The statistically most significant elimination (p ≤ 0.01), i.e. 88% of total PAHs, was observed in the more sandy soil planted with birch, the clearest positive effect being found with Betula pubescens clone on phenanthrene. PAHs and soil composition had rather small effects on birch protein complement. Three proteins with clonal differences were identified: ferritin-like protein, auxin-induced protein and peroxidase. Differences in planted and non-planted soils were detected in bacterial communities by 16S rRNA T-RFLP, and the overall bacterial community structures were diverse. Even though both represent complex systems, trees and rhizoidal microbes in combination can provide interesting possibilities for bioremediation of PAH-polluted soils.     

S -phenylcysteine adduct concentration in serum albumin of countryside residents and factory workers in Estonia

In this communication we present data on S-phenylcysteine (SPC) in human serum albumin in an Estonian cohort. A total of 112 human samples were collected from workers of a benzene processing plant in Kohtla-Järve, Estonia and another 56 samples from nearby countryside residents. Albumin was isolated using a sequential precipitation method designed for low volume plasma samples. The adducted cysteine derivatives were cleaved off from the albumin and subsequently derivatized to phenyl trifluorothioacetate (PTTA) derivatives. Derivatized adducts were subjected to GC/MS analysis utilizing negative chemical ionization and a selected ion monitoring (SIM) technique. The detection limit for the PTTA adduct was 0.2?pmol?g^?1 albumin and the limit of quantification was 2?pmol?g^?1 albumin. The method utilized deuterated SPC as an internal standard. The analysis revealed that adduct levels were also high in the population that was not occupationally exposed to benzene. The reason for this is unknown, but may cause problems if not of environmental origin, when one is attempting to monitor low level occupational or environmental benzene exposure.     

Age-dependent survival analyzed with Bayesian models of mark-recapture data

We describe a Bayesian random effects model of mark-recapture data that accounts for age-dependence in survival and individual heterogeneity in capture probabilities and survival. The model is applied to data on the Glanville fritillary butterfly (Melitaea cinxia) collected from a population enclosed in a large cage in the field. The cage population consisted of a mixture of butterflies originating from newly established and old populations in a large metapopulation in the Aland Islands in Finland. The explanatory variables in the model included the effects of temperature, sex, and population type (new vs. old) on capture probabilities, and the effects of age, sex, population type, and day vs. night on survival. We found that mortality rate increased with age, that mortality rate was much higher during the day than during the night, and that the life span of females originating from newly established populations was shorter than the life span of females from old populations. Capture probability decreased with increasing temperature and decreased with increasing mobility of individuals.     

Rapid one-step assays for on-site monitoring of mouse and rat urinary allergens

Allergy to rodent proteins is common among laboratory animal workers. Sensitive methods to measure exposure to these allergens have been developed. These assays are, however, expensive, time-consuming, and require a laboratory facility and methodological expertise. A simple method to screen for allergen spread, or to test whether hygiene standards are maintained, would be useful. Lateral flow immunoassays (LFIAs) are especially suited for field settings; the tests are simple and results are visible within minutes. LFIAs were developed for detection of the rodent urinary allergens Mus m 1 and Rat n 1. Pilot studies were performed in animal facilities in three countries using both extracts from airborne dust samples and samples collected by wiping surfaces. For comparison and determination of sensitivity, the concentrations of rodent urinary allergens in the samples were also measured using enzyme immunoassays (EIAs). The LFIAs for rat and mouse urinary allergens had a detection limit of 31 pg allergen per mL in a buffer system with purified allergen standards. Results of environmental dust extracts tested in LFIAs correlated well with levels obtained using EIAs. Spread of rodent allergens, or non-adherence to hygiene around laboratory animal facilities, may aggravate rodent allergy. Using a simple, sensitive one-step assay, allergens can be detected to prevent allergen exposure. The results reveal that the rapid assays are suited for on-site demonstration of exposure to rodent allergens, and thus, useful in occupational hygiene practice.     

Has long-term metal exposure induced changes in life history traits and genetic diversity of the enchytraeid worm Cognettia sphagnetorum (Vejd.)?

We studied whether long-term metal exposure has affected life history traits, population growth patterns and genetic diversity of the asexual enchytraeid worm Cognettia sphagnetorum (Vejd.). Enchytraeids from metal contaminated and uncontaminated forest soil were compared by growing them individually in the laboratory and by following their population development in patchily Cu contaminated microcosms. Genetic differences between the two native populations were studied using allozyme electrophoresis. Individuals from the contaminated site had slower growth rate and they produced fewer fragments of larger size when compared to individuals from the uncontaminated site. In patchily Cu contaminated microcosms, C. sphagnetorum from the contaminated site had a slower population growth rate. Most alleles were shared by the two native populations, but there was greater diversity and more unique genotypes in the population living in the uncontaminated site. Overall, long-term exposure to metals has induced only slight changes in life history properties and clonal diversity of C. sphagnetorum.     

A rapid lateral flow immunoassay for the detection of fungal alpha-amylase at the workplace

Fungal alpha-amylase is a flour supplement which is added to improve the quality of bakery products. Various studies have shown that exposure to this enzyme is an important risk factor for the development of bakers' allergy and this allergy is reported to be one of the most frequent causes of occupational asthma. A rapid assay was developed to monitor exposure to occupational allergens directly at the workplace. The sensitivity of the developed assay is 0.32 ng amylase mL(-1) in a buffer system with the commercially available alpha-amylase preparation Fungamyl 1600S as the standard. Initial validation tests (n = 33) were performed with airborne and settled dust from an industrial bakery. The new lateral flow immunoassay detected amylase in 22 of the 26 samples regarded as positive in an enzyme immunoassay, and was negative for all seven enzyme immunoassay-negative samples, while the four lateral flow immunoassay-negative/enzyme immunoassay-positive samples all had levels below 2 ng mL(-1). The sensitivity of 2 ng mL(-1) of the amylase lateral flow immunoassay is sufficient for first screening purposes and, therefore, this simple and rapid assay may allow direct on-site demonstration of work-related hazards of bio-allergen exposure. This would be particularly useful in occupational hygiene practice, especially in traditional or small-scale bakeries which lack the technological skills for testing the exposure to respiratory allergens.