Rapid prenatal diagnosis of sickle cell diseases using oligonucleotide ligation assay coupled with laser-induced capillary fluorescence detection

Prenatal diagnosis of sickle cell diseases has been available for several years, and our laboratory has performed over 1000 prenatal diagnoses. However, currently available techniques are labor-intensive and time-consuming, and thus the diagnosis is delayed, making the mother's decision difficult. We describe a rapid, high-throughput technique based on the ligation assay coupled with automated capillary fluorescence detection. This new approach allows the diagnosis of both Hgb S and Hgb C to be available in a few hours. We have utilized this technique in 30 prenatal diagnoses and found it to be in complete agreement with the standard diagnoses. Copyright © 2002 John Wiley & Sons, Ltd.     

STREAM CHANNEL ADJUSTMENTS FOLLOWING ELIMINATION OF CAVFLE GRAZING1

ABSTRACT: Cattle grazing practices in the western United States have contributed to widespread riparian degradation resulting in unstable channel morphologies and the loss of fish habitat. Because of prolonged disturbance, numerous riparian areas on both public and private lands have been fenced to exclude cattle in order to promote vegetation establishment and riparian improvement. We selected four gravel-bedded, steep alluvial streams in eastern Oregon with cattle exclosures greater than 14 years old for an analysis of geomorphic adjustments following the removal of cattle grazing. We compare channels inside exclosures and in adjacent grazed reaches to identify the salient stream channel properties that respond to the removal of riparian stresses and to document the magnitude of these changes. Results indicate that significant changes occur, with reductions in bankfull dimensions and increases in pool area being the most common and identifiable changes. At all four sites, bankfull widths are narrower by 10 to 20 percent, and the percentage of channel area occupied by pools is higher in the exclosure by 8 to 15 percent. The increase in pool area is primarily offset by a reduction in the percent glide area. Not all of the channel properties demonstrate adjustment, indicating that perhaps 14 years is an insufficient duration for these variables to adjust.     

Drug and drink driving by university students: an exploration of the influence of attitudes

The present study aimed to gather information on drug and alcohol use, the prevalence of drink and drug driving and attitudes to both in an undergraduate university cohort (n = 275). Further, the study aimed to contribute information to aid intervention program development by determining predictors of drink and drug driving behavior. The study examines both drug and alcohol use and the influence of attitudes toward driving while under the influence of alcohol and/or drugs. Results indicated that significant proportions of university students are engaging in the risk-taking behavior of driving under the influence of drugs (25%), alcohol (14%), or both (8%). The results suggest that attitudes toward driving under the influence of alcohol and/or drugs are a strong predictor of engaging in the behavior. Peer influence emerged as a major aspect of attitudes. The results of this study provide an important beginning to understanding drink and drug driving and the influence of attitudes in the university student body.     

The genesis of GDL

This paper discusses the early research that lead to graduated driver licensing, some of the educational principals on which it is based, obstacles to its acceptance, and some of the early efforts in the U.S. and elsewhere. EARLY RESEARCH: The research underlying the concept of graduated driver licensing was a 1971 North Carolina study that identified the overrepresentation of young drivers in crashes at night and when another young person was the right front passenger. EDUCATIONAL PRINCIPALS: Efforts to reduce the risk to young novice drivers applied what was known about learning. The concepts included distributed learning (i.e., over time) and progressing from simple to complex skills. A PROPOSAL: The proposed graduated licensing system based on learning principals included (a) initial experience under low risk conditions, (b) extended supervised practice, (c) gradual move to more complex conditions, and (d) harsher penalties for deliberate risk-taking. OBSTACLES: There were several most common objections raised against graduated licensing. Raising the licensing age decreased mobility. Some young drivers were "good" drivers. Enforcement is difficult. Fear of parental objections. Parents are not driver educators and some young people do not have an available parent. Administrative costs are too high. ACCEPTANCE: Driver educators were the first to see the benefits of a graduated system in the 1970s and 1980s. Toronto nearly adopted a graduated system in 1976. New Zealand was the first to adopt a graduated licensing system in 1984. Michigan in 1997 was the first state to require parental certification of extended supervised driving practice.     

Exposure estimates for the Houston Area Asthma Study

Procedures for determining exposure extimates for the Houston Area Asthma Study are discussed. Two residential clusters of asthmatics in the Houston area have been studied as part of an overall attempt to assess the health effects of air pollution in the Texas Gulf Coast area. Air pollutant exposure data have been produced according to a three-tier monitoring scheme, i.e. (1) continuous data from centrally-located fixed stations, (2) residential indoor/outdoor measurements, and (3) personal monitoring. This air monitoring network should yield estimates of individual exposures for use in health effect correlations.The fixed sites and mobile continuously monitor ambient levels of ozone, nitrogen oxides, sulfur dioxide, carbon monoxide, and meteorological parameters (wind speed, wind direction, temperature, dew point, solar irradiation, and precipitation). Continuous sequential integrated sampling is preformed for total suspended particulates (TSP) and, inhalable particulates (IP) (total of < 2.5m and 2.5–15.0 m) by dichotomous samplers for 24 hr samplers), aldehydes (bubblers), and aeroallergens (intermittent rotorod samplers). In addition to gravimetric determinations, particulate filters are routinely analyzed for sulfate, nitrate, and (every third day) trace elements. Personal monitoring includes ozone, respirable particles, nitrogen dioxide and formaldehyde. A quality assurance/control program that meets specifications established in the EPA Quality Assurance Handbook for air pollution measurement systems was implemented. Examples of results consisting of unvalidated preliminary data from the monitoring for ozone for three participants is presented and approaches to determining exposure estimates are discussed for both an integrated exposure estimate and short time period exposure estimate.(These studies have been funded by the U.S. Environmental Protection Agency through Cooperative Agreement CR 807108010 and Grant R 808738010. Statements made in this article should not be taken as Agency policy.)     

Quantitative determination of arsenobetaine,the major water-soluble arsenical in three species of crab,using high pressure liquid chromatography and an inductively coupled argon plasma emission spectrometer as the arsenic-specific detector

The major water-soluble arsenic compound in the Alaskan king crab, the Alaskan snow crab, and the Dungeness crab was identified as arsenobetaine by HPLC/ICP analysis. This technique is suitable for the identification and quantitative determination of naturally occurring organic arsenic compounds in purified and partially purified extracts from biota.     

Patterns of Aquatic Species Imperilment in the Southern Appalachians: An Evaluation of Regional Databases

/ For regional analyses of species imperilment patterns, data on species distributions are available from the U.S. Fish and Wildlife Service and from the state heritage programs. We compared these two different databases as sources of best available information for regional analyses of patterns of aquatic species imperilment for 132 counties in the southern Appalachians and examined patterns produced from the databases. The heritage program database contained information about a greater number of imperiled species because species need not be federally listed as threatened or endangered to be included in this database. In the southern Appalachians, about half of imperiled molluscs and about one-fourth of imperiled fish were listed as threatened or endangered; much smaller proportions of other taxonomic groups were federally listed. Most threatened and endangered species appeared on both lists, but for about 40% of the species inconsistencies exist, notably a lack of recent records in the heritage program dataset. Numbers of species in each county were significantly different between the two datasets for Georgia, Tennessee, and Virginia, where the largest number of threatened and endangered species reside. Nevertheless, some counties always appeared as centers of imperilment, and the general spatial patterns of imperilment were similar.     

First ceratosaurian dinosaur from Australia

The basal theropod dinosaur clade Ceratosauria, and its subclade Abelisauroidea, is characteristic of late Mesozoic terrestrial vertebrate faunas in western Gondwana (South America, Africa, Madagascar, and India) and Europe. Yet unambiguous records of ceratosaurs have hitherto been absent from Australia, where the theropod assemblage appears to include several typically Laurasian clades. Here, we report the first evidence of ceratosaurs (and potentially abelisauroids) from eastern Gondwana––a diagnostic astragalocalcaneum from the Aptian (121–125?Ma) of Victoria, Australia. Ceratosauria thus occurred in both western and eastern Gondwana during the Early Cretaceous. This fossil adds to the poorly known dinosaur fauna of Australia, a major clade of basal theropods, emphasising that its mid-Cretaceous theropod diversity was surprisingly cosmopolitan despite relative geographic isolation, including clades that have been thought to be typical of both Gondwana and Laurasia––Ceratosauria, Spinosauridae, Carcharodontosauria, Tyrannosauroidea, and Deinonychosauria. Such a contemporaneous association of theropod clades is unknown from other Gondwanan continents and questions the views that the late Mesozoic dinosaur fauna of Australia was dominated by Gondwanan or Laurasian elements, extreme isolation, relictualism, and/or novelty as a ‘centre of origin’. The cosmopolitan theropod fauna of Australia probably reflects the global distribution of these clades early in their history, prior to significant continental breakup.     

Discrimination of Infectious Hepatitis A Viruses by Propidium Monoazide Real-Time RT-PCR

The discrimination of infectious and inactivated viruses remains a key obstacle when using quantitative RT-PCR (RT-qPCR) to quantify enteric viruses. In this study, propidium monoazide (PMA) and RNase pretreatments were evaluated for the detection and quantification of infectious hepatitis A virus (HAV). For thermally inactivated HAV, PMA treatment was more effective than RNase treatment for differentiating infectious and inactivated viruses, with HAV titers reduced by more than 2.4 log₁₀ units. Results showed that combining 50 μM of PMA and RT-qPCR selectively quantify infectious HAV in media suspensions. Therefore, PMA treatment previous to RT-qPCR detection is a promising alternative to assess HAV infectivity.     

Distinctive types of leaf tissue damage influence nutrient supply to growing tissues within seagrass shoots

Herbivory is now recognized as an important structuring agent in seagrass meadows but the attack pattern and tissue damage of consumers are highly variable. Nutritional preferences of herbivores and/or easy access to resources may cause differences in biomass loss among tissues that damage the plant in functionally distinctive ways. The two main Mediterranean herbivores, the fish Sarpa salpa (L.) and the sea urchin Paracentrotus lividus (Lmk.), remove higher amounts of intermediate and external shoot leaves, respectively. To test whether this selective feeding can have different consequences on the allocation patterns of nutrient within plants, we simulated the effect of both herbivores by clipping external and intermediate leaves (plus unclipped controls) of Posidonia oceanica (L.) and we measured plant tolerance in terms of shoot growth and leaf nutrient supply to new tissue using isotopic markers. As expected, control treatments displayed high carbon and nutrient supply from external leaves (83% of the total ¹⁵N and 84% of the total ¹³C incorporated by the shoot). When subjected to clipping, the remaining leaves enhanced carbon and nitrogen supply compared with the control by 16% of N and 36% of C—in the intermediate clipping—and by over 100% of N and 200% of C—in the external clipping—to compensate for the nutrient lost. However, only in the case of fish herbivory (intermediate clipping), enhanced supply alone was able to fully compensate for the nutrient losses. In contrast, this mechanism is not completely effective when external leaves are clipped (urchin herbivory). Yet, the consequences of this nutrient loss under sea urchin herbivory are not apparent from the nutrient content of the new tissue, suggesting that there are other sources of nitrogen income (uptake or reallocation from rhizomes). Our study does not only confirm the tolerance of P. oceanica to herbivory, but also constitutes the first evidence of leaf-specific, compensatory nutrient supply in seagrasses.