An ecosystem model for estimating potential shellfish culture production in sheltered coastal waters

A generic ecosystem model has been developed for estimating the potential production of shellfish culture and the effect of that cultivation on the pelagic ecosystem in sheltered coastal waters. The model describes the dynamics of a simple food web, nutrient cycling and growth of shellfish. The design of the model is closely tied to the temporal and spatial scales that are important in determining the sustainable production level for a particular embayment. The pelagic ecosystem, mussel energetics, population dynamics and hydrodynamics are coupled to allow fully dynamic predictions of the effect of the shellfish density. When applied to Beatrix Bay, an intensive culture embayment in the Pelorus Sound of New Zealand, the model successfully captured main features of the observed system behaviour. The hydrodynamic regime of the bay controls mussel growth and production. Although high fluxes of water into the bay suppress nutrient and carbon cycling signals in the system, the model simulations demonstrated that the mussel cultivation can have considerable effects on the ecosystem of the bay including food depletion and nutrient cycling. One of the most obvious effects is nutrient enhancement through mussel excretion at low cultivation densities, which promotes primary production particularly during the N-limitation period in summer. The sensitivity analysis identified uncertainty in some parameters and indicated areas for which experimental studies could lead to model improvement. The modelling exercise has established a primary predictive tool for managing mussel aquaculture of a coastal embayment to estimate relationships between the stock level and the growth rate of mussels, and the potentially achievable harvest and stocking density.     

Local knowledge and climate change adaptation on Erub Island,Torres Strait

Local knowledge is a valuable asset in observing and managing environmental change, and importantly, is an unheralded source of adaptive capacity. Torres Strait Islanders are no exception, having used such knowledge to adapt to biophysical changes in their environment for centuries. This article explores the ways in which Islanders have coped in the past with environmental changes to plan for their future. This article focuses on Erub Island in the eastern group of islands in the Torres Strait and charts the adaptation actions or activities employed by respected locals (Elders and Aunties). Drawing on their local knowledge, these actions or activities have included the building of rock walls and wind breaks, using native species to re-vegetate sand cays and the coastal foreshore, applying self-sufficient practices such as fish traps and gardening, reading and respecting country, and transferring this knowledge to the younger generation. In this way, it is the Islanders themselves who detail, based on their local knowledge, what is most appropriate for their community.     

Release,Dispersion, and Resuspension of Escherichia coli From Direct Fecal Deposits Under Controlled Flows1

Abstract: Water‐quality standards have been placed on fecal indicator organisms such as Escherichia coli in an attempt to limit the concentrations in water bodies. Cattle can be a significant source of bacteria to water systems, particularly when they are allowed direct access to streams. A flume study was conducted to quantify the effect and understand the transport of E. coli from directly deposited cattle manure. Five steady‐state flows, ranging from 0.00683 to 0.0176 m³/s, were studied and loads from a single cowpie exceeded the U.S. Environmental Protection Agency’s recommended water‐quality standards (235 CFU/100 ml) at each flow over the hour study period. Average E. coli concentrations ranged from 10² to 10⁵ CFU/100 ml over the hour sampling period for all flows. High spatial variations in E. coli concentrations were often seen at each sampling time, with higher concentrations typically at the bottom of the flume. E. coli resuspension was initially greater at 0.5 min after deposition, for the lowest flow (10⁵ CFU/m²/s); however, resuspension rates became similar over time, on the order of 10³ CFU/m²/s. This study demonstrates that the concentrations of E. coli can vary over the water column, and therefore grab samples may inaccurately measure bacteria concentrations and loads in streams. In addition, resuspension rates were often high, so the incorporation of this process into water‐quality models is important for bacteria prediction.     

Assessing Sediment Yield for Selected Watersheds in the Laurentian Great Lakes Basin Under Future Agricultural Scenarios

In the Laurentian Great Lakes Basin (GLB), corn acreage has been expanding since 2005 in response to high demand for corn as an ethanol feedstock. This study integrated remote sensing-derived products and the Soil and Water Assessment Tool (SWAT) within a geographic information system (GIS) modeling environment to assess the impacts of cropland change on sediment yield within four selected watersheds in the GLB. The SWAT models were calibrated during a 6 year period (2000–2005), and predicted stream flows were validated. The R ² values were 0.76, 0.80, 0.72, and 0.81 for the St. Joseph River, the St. Mary River, the Peshtigo River, and the Cattaraugus Creek watersheds, respectively. The corresponding E (Nash and Sutcliffe model efficiency coefficient) values ranged from 0.24 to 0.79. The average annual sediment yields (tons/ha/year) ranged from 0.12 to 4.44 for the baseline (2000 to 2008) condition. Sediment yields were predicted to increase for possible future cropland change scenarios. The first scenario was to convert all “other” agricultural row crop types (i.e., sorghum) to corn fields and switch the current/baseline crop rotation into continuous corn. The average annual sediment yields increased 7–42 % for different watersheds. The second scenario was to further expand the corn planting to hay/pasture fields. The average annual sediment yields increased 33–127 % compared with baseline conditions.     

Naturally occurring radionuclides in materials derived from urban water treatment plants in southeast Queensland, Australia

An assessment of radiologically enhanced residual materials generated during treatment of domestic water supplies in southeast Queensland, Australia, was conducted. Radioactivity concentrations of U-238, Th-232, Ra-226, Rn-222, and Po-210 in water, sourced from both surface water catchments and groundwater resources were examined both pre- and post-treatment under typical water treatment operations. Surface water treatment processes included sedimentation, coagulation, flocculation and filtration, while the groundwater was treated using cation exchange, reverse osmosis, activated charcoal or methods similar to surface water treatment. Waste products generated as a result of treatment included sediments and sludges, filtration media, exhausted ion exchange resin, backwash and wastewaters. Elevated residual concentrations of radionuclides were identified in these waste products. The waste product activity concentrations were used to model the radiological impact of the materials when either utilised for beneficial purposes, or upon disposal. The results indicate that, under current water resource exploitation programs, reuse or disposal of the treatment wastes from large scale urban water treatment plants in Australia do not pose a significant radiological risk.     

Morphological abnormalities in frogs from a rice-growing region in NSW, Australia, with investigations into pesticide exposure

Three frog species (Limnodynastes tasmaniensis, Limnodynastes fletcheri and Litoria raniformis) were surveyed in rice bays of the Coleambally Irrigation Area (CIA), NSW, Australia, during the rice-growing seasons of 2005/2006 and 2006/2007. A total external morphological abnormality index of 7.0% was observed in frogs of the CIA (n?=?1,209). The types and frequencies of abnormalities were typical of reports from agricultural areas with ectrodactyly being the most common aberration. A relatively low abnormality index of 1.2% was observed in L. raniformis (n?=?87) compared to indices of 7.1% and 8.2% observed in L. fletcheri (n?=?694) and L. tasmaniensis (n?=?428), respectively. No conclusive evidence was found of unnaturally high rates of intersex, gonadal maldevelopment or unbalanced sex ratios in any species. Rice bay surface waters differed significantly in mean pesticide concentrations of atrazine and metolachlor on farms growing rice and corn compared to farms with rice as the sole crop. However, the similar abnormality indices observed in recent metamorphs emerging from these two farm types provided no evidence to suggest a link between larval exposure to the measured pesticides and developmental malformations.     

A note on density dependence in population models

One of the most studied phenomena in ecology is density dependent regulation. The model most frequently used to study this behaviour is the theta-logistic model. However, disagreement has developed within the ecology community pertaining to the interpretation of this model’s parameters, and thus as to appropriate values for the parameters to assume. In particular, the parameter θ$\theta$ has been allowed to take negative values, resulting in the ‘growth rate parameter’ estimated to be negative for species which are extant and exhibit no signs of becoming extinct in the short-term. Here we explain this phenomenon by formulating the theta-logistic model in the manner in which the original logistic model was formulated by Verhulst (1838), in doing so providing a simple interpretation of model parameters and thus restrictions on values the parameters may assume. We conclude that θ$\theta$ should (almost always) be restricted to values greater than −1$-1$. This has implications for studies assessing the form of density dependence from data. Additionally, another model appearing in the literature is presented which provides a more flexible model of density dependence at the expense of only one additional parameter.     

Meta-analysis: trophic level, habitat, and productivity shape the food web effects of resource subsidies

Studies of the effects of cross-habitat resource subsidies have been a feature of food web ecology over the past decade. To date, most studies have focused on demonstrating the magnitude of a subsidy or documenting its effect in the recipient habitat. Ecologists have yet to develop a satisfactory framework for predicting the magnitude of these effects. We used 115 data sets from 32 studies to compare consumer responses to resource subsidies across recipient habitat type, trophic level, and functional group. Changes in consumer density or biomass in response to subsidies were inconsistent across habitats, trophic, and functional groups. Responses in stream cobble bar and coastline habitats were larger than in other habitats. Contrary to expectation, the magnitude of consumer response was not affected by recipient habitat productivity or the ratio of productivity between donor and recipient habitats. However, consumer response was significantly related to the ratio of subsidy resources to equivalent resources in the recipient habitat. Broad contrasts in productivity are modified by subsidy type, vector, and the physical and biotic characteristics of both donor and recipient habitats. For this reason, the ratio of subsidy to equivalent resources is a more useful tool for predicting the possible effect of a subsidy than coarser contrasts of in situ productivity. The commonness of subsidy effects suggests that many ecosystems need to be studied as open systems.     

Relationship between conservation biology and ecology shown through machine reading of 32,000 articles

Conservation biology was founded on the idea that efforts to save nature depend on a scientific understanding of how it works. It sought to apply ecological principles to conservation problems. We investigated whether the relationship between these fields has changed over time through machine reading the full texts of 32,000 research articles published in 16 ecology and conservation biology journals. We examined changes in research topics in both fields and how the fields have evolved from 2000 to 2014. As conservation biology matured, its focus shifted from ecology to social and political aspects of conservation. The 2 fields diverged and now occupy distinct niches in modern science. We hypothesize this pattern resulted from increasing recognition that social, economic, and political factors are critical for successful conservation and possibly from rising skepticism about the relevance of contemporary ecological theory to practical conservation.