SEIB–DGVM: A new Dynamic Global Vegetation Model using a spatially explicit individual-based approach

We report the development of a new spatially explicit individual-based Dynamic Global Vegetation Model (SEIB–DGVM), the first DGVM that can simulate the local interactions among individual trees within a spatially explicit virtual forest. In the model, a sample plot is placed at each grid box, and then the growth, competition, and decay of each individual tree within each plot is calculated by considering the environmental conditions for that tree as it relates to the trees that surround it. Based on these parameters only, the model simulated time lags between climate change and vegetation change. This time lags elongated when original biome was forest, because existing trees prevent newly establish trees from receiving enough sunlight and space to quickly replace the original vegetation. This time lags also elongated when horizontal heterogeneity of sunlight distribution was ignored, indicating the potential importance of horizontal heterogeneity for predicting transitional behavior of vegetation under changing climate. On a local scale, the model reproduced climate zone-specific patterns of succession, carbon dynamics, and water flux, although on a global scale, simulations were not always in agreement with observations. Because the SEIB–DGVM was formulated to the scale at which field biologists work, the measurements of relevant parameters and data comparisons are relatively straightforward, and the model should enable more robust modeling of terrestrial ecosystems.     

Spatial distribution and source identification of wet deposition at remote EANET sites in Japan

Wet deposition of major ions was discussed from the viewpoint of its potential sources for six remote EANET sites in Japan (Rishiri, Happo, Oki, Ogasawara, Yusuhara, and Hedo) having sufficiently high data completeness during 2000–2004. The annual deposition for each site ranged from 12.1 to 46.6 meq m⁻² yr⁻¹ for nss-SO₄²⁻, from 5.0 to 21.9 meq m⁻² yr⁻¹ for NO₃⁻. The ranges of annual deposition of the two ions for the sites were lower than those for urban and rural sites in Japanese Acid Deposition Survey by Ministry of the Environment, Japan, and higher than those for global remote marine sites. Factor analysis was performed on log-transformed daily wet deposition of major ions for each site. The obtained two factors were interpreted as (1) acid and soil source (or acid source for some sites), and (2) sea-salt source for all the sites. This indicates that wet deposition of ions over the remote areas in Japan has a similar structure in terms of types of sources. Factor scores of acid and soil source were relatively high during Kosa (Asian dust) events in spring in western Japan. Back-trajectories for high-deposition episodes of acid and soil source (or acid source) for the remote sites showed that episodic air masses frequently came from the northeastern area of Asian Continent in spring and winter, and from central China in summer and autumn. This indicates a large contribution of continental emissions to wet deposition of ions over the remote areas in Japan.     

Benefit of suites of defensive behavior induced by predator chemical cues on anuran tadpoles, Hyla japonica

When predator chemical cues are present, low activity of prey is a commonly seen defensive behavior. However, few studies have explored the functional implications of the defensive behaviors and, thus, elucidated the possible linkages between behavioral responses and its consequences. In this study, we experimentally investigated how behavioral responses of Hyla japonica tadpoles to predator chemical cues affect vulnerability to a dragonfly nymph Anax parthenope julius. The frequency of tadpoles attacked by dragonfly nymphs was lower with chemical cues of predator was present than without chemical cues, and most of attacks occurred when tadpoles were mobile. When tadpoles were exposed to chemical cues, on the other hand, their swimming speed was quicker and swimming distance was longer, respectively, and the rates of being approached of the swimming tadpoles by dragonfly nymph was lower than those not exposed to chemical cues. We found that the tadpoles are induced by predator chemical cues not only to generally lower activity but also to swim in bursts as additional behavior and that the suite of their behavioral responses reduce the vulnerability against dragonfly nymph. Tadpoles can receive information about the predation risks by chemical cues and adjust their defensive behavior accordingly.     

Effects of light quality on initiation and development of meroplanktonic diatom blooms in a eutrophic shallow sea

We investigated the effects of light quality on resting stage cell germination and vegetative cell growth of meroplanktonic diatoms in a small port in Hakata Bay, Japan and in the laboratory. During the investigation over the year of 2006, the meroplanktonic diatom bloom first occurred in the end of May and then repeated wane and wax until October in the small port. From late April to middle May, light penetrating the water column was often strong and attenuations of all spectral lights were low. During this period, Skeletonema costatum, Thalassiosira minima, and Chaetoceros sp. appeared frequently, followed by the blooms of S. costatum and Chaetoceros sp. in late May. Thereafter, S. costatum and Chaetoceros sp. bloomed in late June but not in middle June, when pigmented flagellates bloom appeared. The attenuation of short-wavelength light such as violet and blue lights was markedly high during these diatom and flagellate blooms; all blooms disappeared within several days. Vegetative cell strains of the three diatoms under light emitting diodes (LEDs) with six different spectra (violet, blue, green, orange, red, and near-infrared) grew at a higher rate under short-wavelength light, violet and blue. On the other hand, when suspensions of bottom sediments from Hakata Bay were cultured under the same LEDs and in the dark, vegetative cells of S. costatum appeared under all LEDs except for orange and near-infrared, vegetative cells of T. minima appeared under all LEDs but not in the dark, and vegetative cells of Chaetoceros sp. appeared under violet and blue LEDs. However, vegetative cell densities of the three diatoms increased much more under violet light than under other LEDs within a short period (6 days). Our study indicates that underwater penetration by short-wavelength light, such as violet and blue, may be an important factor in the initiation and development of meroplanktonic diatom blooms.     

Identification and characterization of coagulation inhibitor proteins derived from cyanobacterium Microcystis aeruginosa

The excess growth of cyanobacteria in semi enclosed water areas caused by eutrophication brings about coagulation inhibition in drinking water treatment processes. In this study, coagulation inhibitor proteins produced by Microcystis aeruginosa, a major cyanobacterium in algal bloom, were acquired by a phage display technique, an aluminum-immobilized affinity chromatography and a protein expression technique using Escherichia coli cells. Two cyanobacterial peptides with a high ratio of metallophilic amino acids were recovered, which were a part of homologues of a thiol oxidase enzyme Ero1p and a trans-acting repressor ArsR. It was also shown that the homologue of ArsR exhibited a stronger inhibitory effect on the coagulation of kaolin suspension with polyaluminum chloride than the control proteins. This is the first report to identify a cyanobacterial cell component to inhibit coagulation. The compositions of polar amino acids were critical to explain the strength of coagulation inhibition potential. Polar proteins from cyanobacteria could collectively consume coagulants or stabilize clay particles, which would be plausible explanations for causing coagulation inhibition. Meanwhile, results from the kaolin coagulation tests using the control proteins implied that the neutralization of positive charges of coagulant constituents by simple electrostatic interactions might not be the key mechanism on the protein-induced coagulation inhibition.     

Measuring future dynamics of genuine saving with changes of population and technology: application of an integrated assessment model

Theoretical and empirical studies have been conducted on the genuine saving (GS) based on neoclassical economic theory to assess sustainable development (SD). However, only market prices and statistical national accounts have been used in empirical studies due to limited data availability. The data availability limits to measure GS only in the past and current, causing a wide gap with theoretical results. In this paper, we propose computing GS using an integrated assessment model (IAM) as connected to the mainframe model of macroeconomy. This enables us to use shadow prices, rather than market prices, obtained through an IAM, which ensures substantial consistency among variables. An example would be endogenous capital–output ratio and the rate of TFP. Also, our indicator of GS is more comprehensive in that they now account for various resources, environmental degradation, and land use. Our simulation results, with a particular focus on GS with population change (GSn) and with technological change as well (GSnt), show a sustainable future for up to the end of the century thanks to declining population in the latter half of the century and technological progress, although GS without accounting for population and technology tend to be negative, driven by, among others, capital depreciation and net primary productivity degraded by land use.     

Sorption of dissolved lead from shooting range soils using hydroxyapatite amendments synthesized from industrial byproducts as affected by varying pH conditions

For immobilization technologies to be successful, the use of readily available and cost advantageous amendment is important when the remediation targets vast amounts of contaminated soils. The objectives of this study were to investigate whether the byproduct-synthesized hydroxyapatite can be used as an immobilizing amendment for dissolved Pb from a shooting range soil, and to model the kinetic data collected from dissolution experiments. A soil–solution kinetic experiment was conducted under fixed pH conditions as a function of time. A Pb-contaminated soil was reacted with various hydroxyapatite amendments to determine the dissolution rate and mineral products of soil Pb. Three types of amendments used were pure hydroxyapatite (HA), and poorly crystalline hydroxyapatites synthesized from gypsum waste (CHA), and synthesized from incinerated poultry litter (PHA). The dissolved Pb concentration decreased with the addition of amendments at pH 3–7. Both CHA and PHA were more effective than HA for attenuating Pb dissolution at pH 6 and above. According to the thermodynamic calculation at pH 6, the dissolved Pb concentration for CHA and PHA treatments was predicted to be 66% and 50% lower than that of HA treatment, respectively. A better Pb immobilization effect demonstrated by CHA and PHA resulted in their greater solubility at higher pH, which may promote the formation of chloropyromorphite precipitates. Dissolution kinetics of soil Pb was adequately explained by pseudo-first order and pseudo-second order equations in acid pH ranges. According to the ion exchange model, an adequate agreement between the experimental data and regression curves was shown in the initial 40 min of the reaction process, but the accuracy of model predictability decreased thereafter. According to kinetic models and dissolution phenomena, CHA and PHA amendments had better Pb sorption capacity with rapid kinetics than pure hydroxyapatite at weak acid to neutral pH.     

Analyzing the hydrologic effects of region-wide land and water development interventions: a case study of the Upper Blue Nile basin

In the drylands of the Upper Blue Nile basin, high climate variability and land degradation are rampant. To enhance adaptive capacity in the region, various soil and water conservation interventions have been implemented. Moreover, water resources development schemes such as the Grand Ethiopian Renaissance Dam should be implemented by 2025. We modeled the effects of these interventions on surface runoff in the basin for both current and future (2025) basin conditions, using the runoff coefficient method in a spatially explicit approach. Under current conditions, we observed high spatial variability of mean annual runoff. The northeastern Blue Nile-1 sub-basin produces the highest mean annual runoff (391 mm or 10 × 10⁹ m³), whereas the northwestern Blue Nile-2 sub-basin produces the lowest mean annual runoff (178 mm or 0.2 × 10⁹ m³). The basin generates a total annual runoff volume of 47.7 × 10⁹ m³, of which about 54 % comes from cultivated land. The strong association between land use and topography masked the direct effect of rainfall on runoff. By 2025, total annual runoff yield could decrease by up to 38 % if appropriate basin-wide soil and water conservation interventions and the Grand Ethiopian Renaissance Dam are implemented. However, the full effects of most physical structures will only last for 1 or 2 years without regular maintenance. The improved understanding of the dynamics of the Upper Blue Nile basin’s hydrology provided by the present study will help planners to design appropriate management scenarios. Developing the basin’s database remains important for a holistic understanding of the impacts of future development interventions.     

Synthesis of novel polymer type sulfoxide solid phase combined with the porogen imprinting for enabling selective separation of polychlorinated biphenyls

We developed a novel polymer type sulfoxide-modified solid phase enabling to achieve selective separation of polychlorinated biphenyls (PCBs) from insulation oil. In this study, firstly we prepared base-polymer based on the concept of the molecular imprinting to capture PCBs in selectively, then, the sulfoxide groups were modified on the pore surface of base-polymers by changing preparation methods. As results of liquid chromatographic analyses for the polymers as columns, the base-polymer prepared by xylene as a porogenic solvent showed selective retention ability for chlorinated aromatic compounds by the porogen imprinting effect. Additionally, the polymer-type sulfoxide solid phases showed highly retention ability for PCBs by increasing amount of introduced sulfoxide groups. Consequently, the results of separation of PCBs comparing to insulation oil suggested that the prepared solid phase can be used for the selective separation of PCBs at the same level as a commercially available media utilized for the regulated method.