Concentrations and Diversity of Microbes from Four Local Bioaerosol Emission Sources in Finland

ABSTRACT

Microbial particles can readily be released into the air from different types of man-made sources such as waste operations. Microbiological emissions from different biological sources and their dispersion may be an issue of concern for area planning and for nearby residents. This study was designed to determine the concentrations and diversity of microbiological emissions from four different man-made source environments: waste center with composting windrows, sewage treatment plant, farming environment, and cattle manure spreading. Samples of airborne particles were collected onto polyvinyl chloride filters at three distances along the prevailing downwind direction, from each source environment during a period of approximately 1 week. These samples were analyzed for 13 species or assay groups of fungi, bacterial genus Streptomyces, and Gram-positive and -negative bacteria using quantitative polymerase chain reaction (PCR). Samples for determining the concentrations of viable fungi and bacteria were collected from all environments using a six-stage impactor. The results show that there were variations in the microbial diversity between the source environments. Specifically, composting was a major source for the fungal genera Aspergillus and Penicillium, particularly for Aspergillus fumigatus, and for the bacterial genus Streptomyces. Although the microbial concentrations in the sewage treatment plant area were significantly higher than those at 50 or 200 m distance from the plant area, in the farming environment or cattle manure spreading area, no significant difference was observed between different distances from the source. In summary, elevated concentrations of microbes that differ from background can only be detected within a few hundred meters from the source. This finding, reported earlier for culturable bacteria and fungi, could thus be confirmed using molecular methods that cover both culturable and nonculturable microbial material.

IMPLICATIONS Concentrations and diversity of airborne microbes increase due to particle emissions from different biological waste treatment applications. However, these emissions cannot be separated from the background concentrations after more than a few hundred meters from the source. As part of a risk assessment, it may be necessary to confirm the behavior of microbial emissions from a specific source. Quantitative PCR is a useful tool for estimating total concentrations of different microbial species or groups as it detects both culturable and nonculturable microbial material.     

Dissolution of resin acids, retene and wood sterols from contaminated lake sediments

The dissolution potency of hydrophobic resin acids (RAs), retene and wood sterols from sediments was studied. These wood extractives and their metabolites are sorbed from pulp and paper mill effluents to downstream sediments. With harmful components like these, sediments can pose a hazard to the aquatic environment. Therefore, sediment elutriates with water were produced under variable conditions (agitation rate and efficiency, time), and concentrations of the dissoluted compounds were analyzed. Both naturally contaminated field sediments and artificially spiked sediments were studied. By vigorous agitation RAs can be released fast from the sediment matrix and equilibrium reached within 3 days. Compared to RAs, desorption of retene from lake sediment was slower and did not completely reach equilibrium in 23 days. Sterols spiked to pristine sediment with a 33-day contact time desorbed faster than those associated authentically with industrial sediment of from a contaminated lake. Simulating the water turbulence adjacent to a sediment surface by low and high rate of agitation in the laboratory, an increase in the mixing rate after 43-day elutriation suddenly released a high amount of wood sterols. The results indicate wide variation between hazardous chemicals in their tendency to dissolution from sediment solids. Erosion and hydrology adjacent to the sediment surface, as well as risks from dredging activities of sediments, may expose lake biota to bioactive chemicals.     

Quantitative PCR analysis of fungi and bacteria in building materials and comparison to culture-based analysis

Prolonged moisture on building materials can lead to microbial growth on them. Microbes can emit spores, metabolites and structural parts into the indoor air and thus, cause adverse health effects of people living and working in these buildings. So far, culture methods have been used for assessment of microbial contamination of building materials. In this work, we used quantitative PCR (qPCR) for the detection of selected fungal and bacterial groups in 184 building materials of different types and compared the results with culture-based analysis. Nine either commonly found species, genera or groups of fungi, or those considered as moisture damage indicators, and one bacterial genus, Streptomyces, were determined using qPCR. Fungi and mesophilic actinomycetes were also cultivated using standard media and conditions of the routine analysis. The bacterial genus Streptomyces and the fungal group Penicillium/Aspergillus/Paecilomyces were the most prevalent microbial groups in all building material types, followed by Stachybotrys chartarum and Trichoderma viride/atroviride/koningii. The highest prevalences, concentrations and species diversity was observed on wooden materials. In general, the results of the two methods did not correlate well, since concentrations of fungi and streptomycetes were higher and their occurrence more prevalent when determined by qPCR compared to culture-based results. However, with increasing concentrations, the correlation generally increased. The qPCR assay did not detect Aspergillus versicolor and Acremonium strictum as often as culture.     

A Priori Typology-Based Prediction of Benthic Macroinvertebrate Fauna for Ecological Classification of Rivers

We evaluated a simple bioassessment method based on a priori river typology to predict benthic macroinvertebrate fauna in riffle sites of rivers in the absence of human influence. Our approach predicted taxon lists specific to four river types differing in catchment area with a method analogous to the site-specific RIVPACS-type models. The reference sites grouped in accordance with their type in NMS ordination, indicating that the typology efficiently accounted for natural variation in macroinvertebrate assemblages. Compared with a null model, typology greatly increased the precision of prediction and sensitivity to detect human impairment and strengthened the correlation of the ratio of observed-to-expected number of predicted taxa (O/E) with the measured stressor variables. The performance of the typology-based approach was equal to that of a RIVPACS-type predictive model that we developed. Exclusion of rarest taxa with low occurrence probabilities improved the performance of both approaches by all criteria. With an increasing inclusion threshold of occurrence probability, especially the predictive model sensitivity first increased but then decreased. Many common taxa with intermediate type-specific occurrence probabilities were consistently missing from impacted sites, a result suggesting that these taxa may be especially important in detecting human disturbances. We conclude that if a typology-based approach such as that suggested by the European Union’s Water Framework Directive is required, the O/E ratio of type-specific taxa can be a useful metric for assessment of the status of riffle macroinvertebrate communities. Successful application of the approach, however, requires biologically meaningful river types with a sufficient pool of reference sites for each type.     

Assessing the net atmospheric impacts of wood production and utilization

The main objective of the study was to calculate net atmospheric impacts for wood production and utilization in Finnish boreal forest conditions. Net atmospheric impacts were calculated by comparing net CO₂ exchanges of the wood production and utilization to the reference management regime. Net CO₂ exchanges were simulated with a life cycle assessment (LCA) tool for a Scots pine (Pinus sylvestris L.) stand (MT, Myrtillys-type) in central Finland (Joensuu region, 62°39 N, 29°37 E) over two consecutive rotation periods (100?+?100 years/200 years). Net atmospheric impacts were calculated both for sawn timber and pulpwood, and expressed in kgCO₂m^?3. According to the results, the production of pulp and sawn timber produced emissions of 0.20 and 0.59 kgCO₂m^?3 over the 200-year period, respectively, when the unmanagement regime was used as the reference management regime. When 50 % of the processing waste of timber was accounted as an instant emission to the atmosphere, the atmospheric impact increased to 0.55 kgCO₂m^?3 in pulpwood and to 1.27 kgCO₂m^?3 in sawn timber over the 200 year period. When turnover rates of sawn timber in the technosystem were decreased by 30 % and the share of energy use was decreased to 30 %, the atmospheric impact decreased by 17 % and 4 % for pulpwood and sawn timber, respectively, compared to the default wood degradation and energy use of 50 %. The utilized LCA approach provided an effective tool for approaching net atmospheric impacts originating from the ecosystem carbon (C) flows and variable wood utilization. Taking the ecosystem production and utilization of wood (i.e. degradation of technosystem C stock) into account, in terms of net CO₂ exchange, the mitigation possibilities of wood compared to other products can be accounted for more precisely in the future and C sequestration credited more specifically for a certain wood product.     

Fighting behaviour as a correlate of male mating success in black grouse Tetrao tetrix

Fighting is a fundamental determinant of male fitness in species where females prefer socially dominant males as mates or where dominants can prevent subordinates from mating. This in turn can lead to the evolution of honest inter- and intra-sexual cues of male dominance. Fighting as a behaviour comprises both fighting rate (number of fights per unit of time) and fighting performance (success in winning fights), but it is not always clear which of these components are important for female choice and how they link to signals of male quality. To quantify the relative importance of fighting as a cue for females, we recorded detailed behavioural data from male black grouse Tetrao tetrix at leks. We explored the relationship between phenotypic traits (body mass, eye comb size, tail (lyre) length and blue chroma colouration) and fighting performance and rates and how these were related to male mating success. In older males' pairwise fights, winners had lower blue chroma than losers, but there were no differences in other morphological traits. In yearlings, no morphological trait predicted success in pairwise contests. Both fighting rate and performance were positively related to the number of copulations acquired by a male; however, when controlled for lek centrality, fighting performance and not fighting rate was significantly related to mating success. Our results indicate that females may be using components of fighting behaviour as cues for mate choice.     

Assessing sediment toxicity and arsenite concentration with bacterial and traditional methods

Three sediment samples LP (pool where logs are stored), LF (brook through landfill area), KN (Kaskesniemi) which is in Lake Pyh?selk? downstream from the mill, were taken from an old sawmill area and one from the unpolluted Lake H?yti?inen. The arsenite concentration was measured by GFAAS and two arsenite biosensing bacterial strains Pseudomonas fluorescens OS8 (pTPT31) and Escherichia coli MC1061 (pTOO31). The toxicity of sediment and pore water samples was determined by using luminescent bacteria (Flash test) and, further, whole sediment toxicity was measured using 10 days growth test and 50 days emergency test with midges (Chironomus riparius). With the flash test a lowered EC50 value was found only in sediment LF (EC50=0.17 v/v%). The Flash test indicated that all sediment samples taken from the sawmill area were highly toxic to bacteria, whereas growth and the emergence of chironomids showed no effects in other samples than LF. The midges tolerate well the contaminated environment. In contrast, bioavailability of arsenite of sediment samples KN and LF was quite high determined using the biosensor-strains in a direct contact assay. The bioavailable fraction of sediment LP was 6-10% out of the total arsenite concentration obtained with GFAAS (0.46-0.77 microg g-1 dw). The results show that the choice of analysis method grossly affects the outcome without any of the method giving an incorrect result. Different methods measure different parameters of a toxic sample and can thus be used to complement each other.     

Bioaccumulation of PAHs from creosote-contaminated sediment in a laboratory-exposed freshwater oligochaete, Lumbriculus variegatus

The oligochaete, Lumbriculus variegatus, was used for a bioaccumulation assay in the creosote-contaminated sediment of Lake J?ms?nvesi in a 28-day experiment. The PAH concentrations of the whole body tissue of worms, sediments and water samples were determinated by GC-MS. Chemical analyses showed that benzo(k)fluoranthene, anthracene and fluorene were the main PAH compounds present in the tissue of oligochaetes, just as in the sediment. The biota-sediment accumulation factors (BSAFs) of the individual PAHs varied from 1.2 to 5.7. It is concluded that oligochaetes have a marked ability to accumulate and retain PAHs from creosote-contaminated sediment.     

Lead poisoning and other human-related factors cause significant mortality in white-tailed eagles

The white-tailed eagle (Haliaeetus albicilla) suffered a severe population decline due to environmental pollutants in the Baltic Sea area ca. 50 years ago but has since been recovering. The main threats for the white-tailed eagle in Finland are now often related to human activities. We examined the human impact on the white-tailed eagle by determining mortality factors of 123 carcasses collected during 2000–2014. Routine necropsy with chemical analyses for lead and mercury were done on all carcasses. We found human-related factors accounting for 60% of the causes of death. The most important of these was lead poisoning (31% of all cases) followed by human-related accidents (e.g. electric power lines and traffic) (24%). The temporal and regional patterns of occurrence of lead poisonings suggested spent lead ammunition as the source. Lead shot was found in the gizzards of some lead-poisoned birds. Scavenging behaviour exposes the white-tailed eagle to lead from spent ammunition.     

Biological responses of midge (Chironomus riparius) and lamprey (Lampetra fluviatilis) larvae in ecotoxicity assessment of PCDD/F-, PCB- and Hg-contaminated river sediments

Environmental Science and Pollution Research - We evaluated the utility of chironomid and lamprey larval responses in ecotoxicity assessment of polychlorinated dibenzo-p-dioxins, dibenzofurans...