应用于矿山修复的高效菌株鉴定与溶岩机制:基于增强回归树分析

岩石矿区废弃地水土流失问题极度严峻,微生物对修复该问题造成的退化生境具有重要意义,为探究微生物对岩石矿区生境修复的有效性与作用机制,采用两次定向筛选,获得1株高效产铁载体及吲哚乙酸(IAA)的硅酸盐矿物分解细菌,利用16S rRNA基因序列分析鉴定该细菌为Pseudomonas protegens.通过该细菌对硅酸盐岩的岩石分解实验,测定培养液pH值,K、Al、Si这3种元素的释放量,检测岩石溶蚀的粒径变化,并分析培养液中不同有机酸,氨基酸及多糖的浓度变化,研究Pseudomonas protegens NLX-4对硅酸盐的溶蚀效果,同时引入增强回归树(boosted regression tree analysis,BRT)分析,探究其促溶机制.分析表明,该细菌通过代谢积累一定浓度的酒石酸(777 mg·L~(-1))以及多糖(8.21 g·L~(-1)),对硅酸盐岩产生释钾、释铝、脱硅的作用,从而有效促进岩石的分解.菌株Pseudomonas protegens NLX-4可作为修复废弃矿地被破坏生境的良好菌种资源.     

噻吩磺隆降解菌Staphylococcus sp.的分离及其降解特性与途径

采用富集培养技术从磺酰脲类除草剂污染土壤中筛选得到1株降解噻吩磺隆的细菌,命名为ZWS13.经形态特征和16S rRNA基因序列分析,初步鉴定为葡萄球菌属(Staphylococcus sp.).采用HPLC研究了初始底物浓度、温度、接种量、pH等因素对菌株ZWS13降解噻吩磺隆的影响.结果表明,菌株ZWS13对噻吩磺隆的降解具有较广的底物浓度范围,在7 d内对初始浓度5.0~100.0 mg·L~(-1)噻吩磺隆的降解率达到60%以上;菌株ZWS13降解噻吩磺隆的较适pH为8.0,较适温度为40℃,较适接种量为1%;其中,菌株培养温度为40℃时,菌株在10 d内对50.0mg·L~(-1)噻吩磺隆的降解率达到99%以上.降解谱测定结果表明,菌株对烟嘧磺隆、吡嘧磺隆和甲磺隆亦具有良好的降解效果.采用HPLC-MS分析确定了菌株对噻吩磺隆的5个降解产物,推测菌株对噻吩磺隆的降解途径主要为磺酰脲桥C—N键的断裂、脱甲基作用或脱酯作用的甲基丢失及三嗪环的开裂.研究表明,菌株ZWS13能够有效地降解噻吩磺隆,具有生物修复噻吩磺隆污染的潜力.     

羊肚菌菌丝体的培养

本文首次报道了羊肚菌菌丝在９种琼脂培养基、５种固体培养料种、７种液体培养液中的生长情况，获得了培养羊肚菌菌种的最佳配方和１种静置培养液体菌种的新技术。     

联苯代谢对微生物的生长胁迫及分裂抑制

以联苯/多氯联苯降解菌株R04（Rhodococcus sp.R04）和几种模式微生物为研究对象，利用高效液相色谱、荧光显微镜、扫描电子显微镜等分析微生物在联苯及其代谢物培养条件下细胞分裂和形态的变化.结果表明联苯及其代谢产物对红球菌R04和几种模式微生物细胞的分裂有抑制作用，并对部分微生物形态有影响.与前体-联苯及其代谢产物2-羟基-6-酮基-6-苯基-2，4-己二烯酸相比，2，3-二羟基联苯对G⁺、G^-细菌，或是酵母细胞分裂都有较强的抑制和形态的改变.2，3-二羟基联苯导致R.R04和缺陷型R.R04细胞形成不完整隔膜的比例增加；造成96.4%的大肠杆菌BL21细胞表面凹陷，胞质内容物流失，菌体体积缩小；导致枯草芽孢杆菌89.6%的细胞体积明显缩小；导致金黄色葡萄球菌基本没有细胞能形成完整的分裂隔膜；导致红酵母细胞能进行出芽生殖的比例从64.2%降低到19.3%，但对其细胞形态无明显改变.联苯代谢物2，3-二羟基联苯对红球菌R04及其它微生物细胞分裂和增殖的抑制作用比其前体-联苯强，建议在研究环境化合物与微生物互作时，应考虑环境化合物代谢的毒性效应.     

Effect of commercial pesticides on plant growth-promoting activities of Burkholderia sp. strain L2 isolated from rhizosphere of Lycopersicon esculentum cultivated in agricultural soil

The in vitro study was carried out to examine the toxicity of four commercially used pesticides (phorate, mancozeb, chlorpyrifos, and endosulfan) at the recommended dose (1X) and higher field doses (1.5X, 2X, 2.5X, and 3X) on plant growth-promoting activities of Burkholderia sp. strain L2, isolated from pesticide-treated rhizosphere of Lycopersicon esculentum. At the recommended dose, level of toxicity of all the pesticides to phosphate solubilization activity and indole-3-acetic acid (IAA) production was less detrimental as compared to exceeding doses. At maximum dose rate of each pesticide, the percentage decrease in phosphate solubilization and IAA production over control was found in order of chlorpyrifos < mancozeb < endosulfan < phorate. Present study proves that Burkholderia sp. strain L2 could be used as a potential microbial inoculant in the agricultural soil having persistent pesticide residues.     

Growth and Foliar Nitrogen Status of Four Plant Species Exposed to Atmospheric Ammonia

A chamber study was conducted to evaluate the growth response and leaf nitrogen (N) status of four plant species exposed to continuous ammonia (NH₃) for 12 weeks (wk). This was intended to evaluate appropriate plant species that could be used to trap discharged NH₃ from the exhaust fans in poultry feeding operations before moving off-site. Two hundred and forty bare-root plants of four species (Juniperus virginiana (red cedar), Gleditsia triacanthos var. inermis (thornless honey locust), Populus sp. (hybrid poplar), and Phalaris arundinacea (reed canary grass) were transplanted into 4- or 8-L polyethylene pots and grown in four environmentally controlled chambers. Plants placed in two of the four chambers received continuous exposure to anhydrous NH₃ at 4 to 5 ppm while plants in another two chambers received no NH₃. In each of the four chambers, 2 to 4 plants per species received no fertilizer while the rest of the plants were fertilized with a 100 ppm solution containing 21% N, 7% phosphorus, and 7% potassium. The results showed that honey locust was the fastest-growing species. The superior growth of honey locust among all species was also supported by its total biomass, root, and root dry matter (DM) weights. For all species there was a trend for plants exposed to NH₃ to have greater leaf DM than their non-exposed counterparts at 6 (43.0 vs. 30.8%; P = 0.09) and 12 wk (47.9 vs. 36.6%; P = 0.07), and significantly greater (P ≤ 0.05) leaf N content at 6 (6.44 vs. 3.67%) and 12 wk (7.05 vs. 3.51%) when exposed to NH₃. Numerically greater leaf DM due to NH₃ exposure was also consistently measured in poplar at both sampling periods. Hybrid poplar, as well as honey locust and reed canary grass, deposited 1.5 to 2-fold greater N in their leaves than red cedar tissues as a result of NH₃ exposure compared to non-exposed plants. Regardless of the effect of NH₃ on foliar color and damage score of the plants, the increase of foliar N content (g 100 g^?1 of fresh foliage weight) after NH₃ exposure at 6 and 12 wk was 0.45 and 0.87 for grass,1.25 and 1.34 for locust, and 2.67 and 6.09 for poplar. However, only honey locust likely benefited from ambient NH₃ as indicated by its consistent leaf color quality and lower damage score, compared with other species that were adversely affected by atmospheric NH₃.     

Degradation of polycyclic aromatic hydrocarbons by Pseudomonas sp. JM2 isolated from active sewage sludge of chemical plant

It is important to screen strains that can decompose polycyclic aromatic hydrocarbons (PAHs) completely and rapidly with good adaptability for bioremediation in a local area. A bacterial strain JM2, which uses phenanthrene as its sole carbon source, was isolated from the active sewage sludge from a chemical plant in Jilin, China and identified as Pseudomonas based on 16S rDNA gene sequence analysis. Although the optimal growth conditions were determined to be pH 6.0 and 37℃, JM2 showed a broad pH and temperature profile. At pH 4.5 and 9.3, JM2 could degrade more than 40% of fluorene and phenanthrene (50 mg/L each) within 4 days. In addition, when the temperature was as low as 4℃, JM2 could degrade up to 24% fluorene and 12% phenanthrene. This showed the potential for JM2 to be applied in bioremediation over winter or in cold regions. Moreover, a nutrient augmentation study showed that adding formate into media could promote PAH degradation, while the supplement of salicylate had an inhibitive effect. Furthermore, in a metabolic pathway study, salicylate, phthalic acid, and 9-fluorenone were detected during the degradation of fluorene or phenanthrene. In conclusion, Pseudomonas sp. JM2 is a high performance strain in the degradation of fluorene and phenanthrene under extreme pH and temperature conditions. It might be useful in the bioremediation of PAHs.     

美洲商陆和籽粒苋对接种伯克氏菌的生理生化响应及其对富集铯的影响

利用盆栽试验研究一株具有重金属耐性的伯克霍尔德氏菌(Burkholderia sp.D54)对美洲商陆和籽粒苋生长及对铯富集的影响.结果表明,接种菌株D54,美洲商陆和籽粒苋总干物重分别比对照处理增加19.8%～33.4%和22.9%～76.6%,美洲商陆和籽粒苋地上部铯含量分别增加4.9%～22.4%和8.1%～19.4%,根中铯含量分别增加6.8%～15.7%和1.1%～10.8%.同时,接种微生物还增加了植物对钾的吸收,提高供试植物的光合反应速率、气孔导度、蒸腾速率和水分利用率,增加铯胁迫条件下植物的抗氧化酶CAT、POD、SOD的活性,降低了MDA的含量.     

萘降解菌MQ合成靛蓝的研究

利用萘降解菌(丛毛单胞菌)MQ完整细胞对吲哚进行转化合成靛蓝,结果表明菌株MQ具有较好的靛蓝合成能力,靛蓝产量在4h左右即达到稳定.薄层色谱和高效液相色谱分析结果表明,合成的蓝色产物为靛蓝.考察了反应温度及摇床转速对靛蓝合成的影响,结果表明最适温度和转速分别为25℃和150r·min-1.随后,采用表面响应法确定了菌株MQ合成靛蓝的最优条件:菌株接种量OD6602.16,吲哚浓度200.55mg·L-1,pH=6.91.在最优条件下,菌株MQ合成靛蓝的产量为53.05mg·L-1,比初始条件下的产量提高了179%.     

嗜盐高效降酚菌株Halomonas sp.H17的筛选及降解苯酚特性

从巴丹吉林沙漠盐湖沉积物中分离获得1株在高盐环境下高效降解苯酚菌H17.分析了H17生理生化特性、16S rDNA基因序列、苯酚降解特性及动力学,结果表明,H17属于盐单胞菌属(Halomonas sp.),能在0～20%的盐度下有效降解苯酚,每升外加适量的碳源(葡萄糖浓度0.8 g)和复合氮源(KNO_3 1 g、NH_4Cl 5 g、酵母提取物0.2 g和胰蛋白胨0.2 g)能够促进H17的生长及降解苯酚能力.在温度为30℃、pH 7～8、盐度5～10%的条件下,H17均能高效降解苯酚,最高降解率可达到88.5%.该菌株降解苯酚动力学符合Halane模型,经拟合其生长参数为μ_(max)=0.31 h~(-1),K_S=191.63 mg·L~(-1),K_i=683.05 mg·L~(-1).研究显示H17具有在高盐环境下降解和耐受苯酚的能力,同时对环境有较强的适应性,体现出其在高盐含酚废水实际处理中具有良好的应用价值.