Hydrodynamic and ecological assessment of nearshore restoration: A modeling study

Along the Pacific Northwest coast, much of the estuarine habitat has been lost over the last century to agricultural land use, residential and commercial development, and transportation corridors. As a result, many of the ecological processes and functions have been disrupted. To protect and improve these coastal habitats that are vital to aquatic species, many projects are currently underway to restore estuarine and coastal ecosystems through dike breaches, setbacks, and removals. Understanding site-specific information on physical processes is critical for improving the success of such restoration actions. In this study, a three-dimensional hydrodynamic model was developed to simulate estuarine processes in the Stillaguamish River estuary, where restoration of a 160-acre parcel through dike setback has been proposed. The model was calibrated to observed tide, current, and salinity data for existing conditions and applied to simulate the hydrodynamic responses to two restoration alternatives. Model results were then combined with biophysical data to predict habitat responses within the restoration footprint. Results showed that the proposed dike removal would result in desired tidal flushing and conditions that would support four habitat types on the restoration footprint. At the estuary scale, restoration would substantially increase the proportion of area flushed with freshwater (<5 ppt) at flood tide. Potential implications of predicted changes in salinity and flow dynamics are discussed relative to the distribution of tidal marsh habitat.     

Continuous versus binary representations of landscape heterogeneity in spatially-explicit models of mobile populations

How a landscape is represented is an important structural assumption in spatially-explicit simulation models. Simple models tend to specify just habitat and non-habitat (binary), while more complex models may use multiple levels or a continuum of habitat quality (continuous). How these different representations influence model projections is unclear. To assess the influence of landscape representation on population models, I developed a general, individual-based model with local dispersal and examined population persistence across binary and continuous landscapes varying in the amount and fragmentation of habitat. In binary and continuous landscapes habitat and non-habitat were assigned a unique mean suitability. In continuous landscapes, suitability of each individual site was then drawn from a normal distribution with fixed variance. Populations went extinct less often and abundances were higher in continuous landscapes. Production in habitat and non-habitat was higher in continuous landscapes, because the range of habitat suitability sampled by randomly dispersing individuals was higher than the overall mean habitat suitability. Increasing mortality, dispersal distance, and spatial heterogeneity all increased the discrepancy between continuous and binary landscapes. The effect of spatial structure on the probability of extinction was greater in binary landscapes. These results show that, under certain circumstances, model projections are influenced by how variation in suitability within a landscape is represented. Care should be taken to assess how a given species actually perceives the landscape when conducting population viability analyses or empirical validation of theory.     

辽宁省气候-植被指标时空变化特征及森林适宜性分析

基于辽宁省56个气象站的气象资料,利用Kira的温暖指数（WI）、寒冷指数（CI）和徐文铎的湿度指数（HI）分析辽宁省近40年（1967-2006年）气候-植被指标的时空变异。结果表明,就辽宁省区域平均值而言,WI指数呈升高趋势,每10年增加幅度为2.47℃·月,CI指数呈下降趋势,每10年下降幅度为2.31℃·月,HI总体呈下降趋势,波动较WI和CI明显,从气候—植被指数变化趋势看,对红松Pinus koraiensis Sieboldet Zuccarini、长白落叶松Larixolgensis等不利,而对油松Pinu stabulaeformis Carr、栓皮栎Quercus vari abilis Blume等树种有利。空间变化特征表现为,温暖指数界限呈向西北移动的趋势,表明暖温带落叶阔叶疏林带的适宜面积增加,而温带针阔叶混交林带的适宜面积减小;HI指数减小并且向东移,表明随着指数带的北移和东移缩小限制了原有针叶树种的生长,而对栎树Phytophthora ramorum等阔叶树种有利。     

Field-breeding birds on organic and conventional arable farms in the Netherlands

In this study territory densities of field-breeding farmland birds were compared on pairwise-selected organic and conventional arable farms for two years. Differences in territory densities between the two farm types were explained examining the effects of three factors on territory densities: (1) non-crop habitats, (2) crop types and (3) within-crop factors. In both years, densities of most species did not differ between organic and conventional farms. Only skylark and lapwing were more abundant on organic farms, but only skylarks showed a consistent pattern over both years. Differences in crop types grown between the two systems were the only explaining factor for differences in densities of skylark. For lapwing, the difference was only partly due to differences in crop type, but differences in within-crop factors (probably as a result of crop management) were likely to have had an effect as well. There were no significant differences in abundance of non-crop habitats between the two farming systems, so this could not explain differences in territory densities.     

An analytical platform for cumulative impact assessment based on multiple futures: the impact of petroleum drilling and forest harvesting on moose (Alces alces) and marten (Martes americana) habitats in northeastern British Columbia

The combined influence on the environment of all projects occurring in a single area is evaluated through cumulative impact assessments (CIA), which consider the consequences of multiple projects, each insignificant on its own, yet important when evaluated collectively. Traditionally, future human activities are included in CIA using an analytical platform, commonly based on complex models that supply precise predictions but with reduced accuracy. To compensate for the lack of accuracy in current CIA approaches, we propose a shift in the paradigm governing CIA. The paradigm shift involves a change in the focus of CIA investigations from the detailed analysis of one unlikely future to the identification of the patterns describing multiple potential future changes in the environment. To illustrate the approach, a set of 144 possible and equally likely futures were developed that aimed to identify the potential impacts of forest harvesting and petroleum drilling on the habitat suitability of moose and marten in northeast British Columbia, Canada. The evolution of two measures of habitat suitability (average habitat suitability index and surface of the stands with habitat suitability index >0.5) revealed that the human activities could induce cycles in the habitat dynamics of moose and marten. The planning period of 100 years was separated into three distinct periods following a sinusoidal pattern (i.e., increase - constant - decrease in the habitat suitability measures). The attributes that could induce significant changes in the assessment of environment are the choice of harvesting age and species.     

Application of the target fish community model to an urban river system

Several models have been developed to assess the biological integrity of aquatic systems using fish community data. One of these, the target fish community (TFC) model, has been used primarily to assess the biological integrity of larger, mainstem rivers in southern New England with basins characterized by dispersed human activities. We tested the efficacy of the TFC approach to specify the fish community in the highly urbanized Charles River watershed in eastern Massachusetts. To create a TFC for the Charles River we assembled a list of fish species that historically inhabited the Charles River watershed, identified geomorphically and zoogeographically similar reference rivers regarded as being in high quality condition, amassed fish survey data for the reference rivers, and extracted from the collections the information needed to define a TFC. We used a similarity measurement method to assess the extent to which the study river community complies with the TFC and an inference approach to summarize the manner in which the existing fish community differed from target conditions. The five most abundant species in the TFC were common shiners (34%), fallfish (17%) redbreast sunfish (11%), white suckers (8%), and American eel (7%). Three of the five species predicted to be most abundant in the TFC were scarce or absent in the existing river community. Further, the river was dominated by macrohabitat generalists (99%) while the TFC was predicted to contain 19% fluvial specialist species, 43% fluvial dependent species, and 38% macrohabitat generalist species. In addition, while the target community was dominated by fish intolerant (37%) and moderately tolerant (39%) of water quality degradation, the existing community was dominated by tolerant individuals (59%) and lacked intolerant species expected in the TFC. Similarity scores for species, habitat use specialization, and water quality degradation tolerance categories were 28%, 35% and 66%, respectively. The clear pattern of deviations from target conditions when observing fish habitat requirements strongly suggests that physical habitat change should be a priority for river enhancement in the Charles River. Comparison of our target and existing fish communities to those from a comprehensive study of Northeastern fish assemblage responses to urban intensity gradients revealed very similar results. Likewise, comparison of our TFC community and affinity scores to those of other TFCs from similar regions also yielded similar results and encouraging findings. Based on the positive results of these comparisons, the utility of the findings from the inference approach, and the widespread adoption of the TFC in the Northeast US, it appears that the TFC approach can be used effectively to identify the composition of a healthy fish community and guide river enhancements in both highly urbanized and non-urbanized streams and rivers in the Northeast US.     

Population viability of the Siberian Tiger in a changing landscape: Going, going and gone?

The Amur tiger (Panthera tigris altaica) is a flagship species of the boreal forest ecosystem in northeastern China and Russia Far East. During the past century, the tiger population has declined sharply from more than 3000 to fewer than 600 individuals, and its habitat has become much smaller and greatly fragmented. Poaching, habitat degradation, habitat loss, and habitat fragmentation have been widely recognized as the primary causes for the observed population decline. Using a population viability analysis tool (RAMAS/GIS), we simulated the effects of poaching, habitat degradation, habitat loss, and habitat fragmentation on the population dynamics and extinction risk of the Amur tiger, and then explored the relative effectiveness of three conservation strategies involving improving habitat quality and establishing movement corridors in China and Russia. A series of controlled simulation experiments were performed based on the current spatial distribution of habitat and field-observed vital rates. Our results showed that the Amur tiger population could be viable for the next 100 years if the current habitat area and quality were well-maintained, with poaching strictly prohibited of the tigers and their main prey species. Poaching and habitat degradation (mainly prey scarcity) had the largest negative impacts on the tiger population persistence. While the effect of habitat loss was also substantial, habitat fragmentation per se had less influence on the long-term fate of the tiger population. However, to sustain the subpopulations in both Russia and China would take much greater conservation efforts. The viability of the Chinese population of tigers would rely heavily on its connectivity with the largest patch on the other side of the border. Improving the habitat quality of small patches only or increasing habitat connectivity through movement corridors alone would not be enough to guarantee the long-term population persistence of the Amur tiger in both Russia and China. The only conservation strategy that allowed for long-term persistence of tigers in both countries required both the improvement of habitat quality and the establishment of a transnational reserve network. Our study provides new insights into the metapopulation dynamics and persistence of the Amur tiger, which should be useful in landscape and conservation planning for protecting the biggest cat species in the world.     

Refining logistic regression models for wildlife habitat suitability modeling—A case study with muntjak and goral in the Central Himalayas, India

High quality habitat suitability maps are indispensable for the management and planning of wildlife reserves. This is particularly important for megadiverse developing countries where shortages in skilled manpower and funding may preclude the use of mathematically complex modeling techniques and resource-intensive field surveys. In this study, we propose a simulation based k-fold partitioning and re-substitution approach to refine and update logistic regression models that are widely used for habitat suitability assessment and modeling. We test the modeling strategy using data from a rapid field survey conducted for habitat suitability assessment for muntjak (Muntiacus muntjak) and goral (Naemorrhaedus goral) in the central Himalayas, India. Results obtained from simulations match expectations in terms of model behavior and in terms of published habitat associations of the investigated species. Qualitative comparisons with predictions from the GARP, MaxEnt and Bioclimatic Envelopes modeling systems also show broad agreement with predictions obtained from the proposed technique. The proposed technique is suggested as a rapid-assessment precursor to detailed habitat studies such as patch occupancy modeling in situations where funds or trained manpower are not available.