贵州喀斯特山区不同种植年限花椒根际土壤细菌群落结构特征研究

以贵州花江峡谷花椒(Zanthoxylum bungeamun)林为研究对象,采用16S rRNA高通量测序技术,分析种植5、10、20、30 a花椒根际土壤细菌群落结构和多样性特征,探讨不同种植年限花椒土壤理化因子对根际细菌群落分布的影响,为喀斯特石漠化地区花椒农业可持续发展提供有效的理论依据。结果表明,随着花椒种植年限的增加,土壤含水率、pH和有效磷逐渐升高,有机质、铵态氮和硝态氮含量先降低后升高(P<0.05)。根际土壤细菌Shannon、Simpson指数总体呈现上升趋势,OTUs、Chao1指数在10a较低。PCo A分析显示,不同种植年限花椒根际细菌群落组成差异显著,并且随着年限的增加,群落结构趋于相似;差异指示种分析表明,5—30a差异指示种分别为Firmicutes(厚壁菌门)、Cyanobacteria(蓝藻菌门)、Planctomycetes(浮霉菌门)、Entotheonellaeota(肠杆菌门)。RDA分析表明,有机质和含水率与细菌群落分布显著相关(P<0.05)。系统发育多样性分析表明,丰富类群多样性与环境因子存在较多的正相关,稀有类群比丰富类群有更强的发育信号。Bug Base预测分析发现:随着年限增加根际土壤好氧细菌增加,厌氧细菌下降,5、10 a氧化胁迫耐受菌低于20、30 a,致病菌在5、10 a高于20、30 a。综上,种植年限影响了花椒根际土壤细菌群落多样性,不同年限根际土壤肥力不同使得土壤细菌选择性生长,随着一定时间发育花椒抗病能力提高。     

16S rDNA克隆文库解析AO-MBR系统中细菌种群多样性

采用分子生物学手段16S rDNA克隆文库方法对缺氧/好氧膜生物反应器(AO-MBR)的好氧池与缺氧池中细菌进行了多样性研究.实验结果表明,好氧池污泥样品的克隆文库包括9个类群,其中变形菌(Proteobacteria)和拟杆菌(Bacteroidetes)在文库中所占比例最大,分别为37.04％和14.81％;其次是酸杆菌(Acidobacteria)、未培养菌(uncultured bacterium)、绿菌(Chlorobi)和未培养的绿弯菌(uncultured Chloroflexi bacterium)、浮霉状菌(Planctomycetes),分别为11.11％、11.11％、7.41％、7.41％和5.56％;硝化螺旋菌(Nitrospirae)和裸藻门(Euglenozoa)所占比例相对较小,均为1.85％.缺氧池样品克隆文库包括10个类群,其中变形菌(Proteobacteria)、拟杆菌(Bacteroidetes)和未培养菌(uncultured bacterium)在文库中所占比例最大,分别为27.91％、13.95％和12.79％;其次是浮霉状菌(Planctomycetes)、酸杆菌(Acidobacteria)和绿弯菌(Chloroflexi),在文库中所占比例分别为9.3％、9.3％和9.3％;硝化螺旋菌(Nitrospirae)、裸藻门(Euglenozoa)、芽单胞菌(Gemmatimonadetes)和放线菌(Actinobacteria)所占比例相对较少,分别为6.98％、8.14％、1.16％和1.16％.两池细菌的主要类群相似,但菌属及比例有所差异,变形菌是系统中的主要脱氮菌属.     

Determination of microbiological contamination,antibacterial and antioxidant activities of natural plant hazelnut (Corylus avellana L.) pollen

The aim of our study is to determine microbial contamination, antibacterial and antioxidant activities of 14 pollen samples of Corylus avellana collected from different locations in Slovakia. Microbiological analysis was carried out in two steps: microbiological assays and studies of antibacterial activity of pollen extracts. The antimicrobial properties of pollen extracts were carried out with the disc-diffusion method. Methanol (70%), ethanol (70%) and distilled water were used for pollen extracts. Five strains of bacteria such as gram-negative (Salmonella enterica subsp. enterica CCM 3807, Escherichia coli CCM 2024, and Yersinia enterocolitica CCM 5671) and gram-positive (Staphylococcus aureus CCM 2461 and Bacillus thuringiensis CCM 19T) were tested. Antioxidant activity of pollen extracts was determined by the DPPH method. Bacterial analysis includes the determination of the total bacterial count ranged from 4.08 to 4.61 log CFU g^?1, mesophilic aerobic bacteria ranged from 3.40 to 4.89 log CFU g^?1, mesophilic anaerobic bacteria ranged from 3.20 to 4.52 log CFU g^?1, coliform bacteria ranged from 3.30 to 4.55 log CFU g^?1, yeasts and filamentous fungi ranged from 3.00 to 3.56 log CFU g^?1. Microscopic filamentous fungi Aspergillus spp., Alternaria spp., Penicillium spp., Cladosporium spp., Rhizopus spp., and Paecylomyces spp. were isolated from hazelnut pollen. Yersinia enterocolitica was the most sensitive strain among ethanolic and methanolic pollen hazelnut extracts. Staphylococcus aureus was the most sensitive strain against aqueous hazelnut pollen extracts. We determined the following sensitivity against ethanol pollen extracts respectively: Yersinia enterocolitica?>?Salmonella enterica?>?Staphylococcus aureus?>?Bacillus thuringiensis?>?Escherichia coli. Methanol pollen extracts had shown following sensitivity: Yersinia enterocolitica?>?Salmonella enterica?>?Escherichia coli?>?Staphylococcus aureus?>?Bacillus thuringiensis. Aqueous extracts had shown the following sensitivity: Staphylococcus aureus?>?Salmonella enterica?>?Escherichia coli?>?Bacillus thuringiensis?>?Yersinia enterocolitica. Hazelnut pollen extracts have over 82% antioxidant capacity in samples from non-urban zones. An elevated level of antioxidant potential in the pollen is determined by its biological properties conditioned by biologically active substances. DPPH method allowed characterizing pollen as a source of antioxidants.     

有机肥处理对旱地红壤细菌群落及玉米生产力的影响

为探明旱地红壤细菌群落特征及玉米生产力对不同有机肥处理的响应，基于自2002年设置在中国科学院鹰潭红壤生态实验站的有机培肥长期定位试验，采用Illumina高通量测序，研究不同有机肥（不施肥，M0；低量有机肥，M1；高量有机肥，M2；高量有机肥加石灰，M3）处理下土壤细菌群落多样性和结构以及玉米生产力的变化.结果发现，与M0相比，土壤pH、有机质（SOM）、全氮（TN）、全磷（TP）含量和玉米生产力在不同有机肥（M1、M2和M3）处理下均显著增加，其中M3处理的提升效果最佳.施用有机肥显著提高了土壤细菌群落的Shannon、Evenness、Chao1与ACE指数，重塑了细菌群落结构.基于随机森林模型分析，土壤性质中的pH和TP显著影响土壤细菌多样性，而pH、SOM、TP和TN对土壤细菌群落结构影响显著.相关性分析和结构方程模型分析表明，土壤TP和SOM可以通过改变土壤细菌多样性和群落组成间接影响玉米生产力.研究结果从指导我国南方红壤区农田合理施肥的角度，为农田土壤质量提高及耕地产能提升提供科学依据.     

优势微生物菌群消减有机污泥作用效果分析

本文阐述用优势微生物菌群消解有机污泥的作用效果及原因,指出了优势菌群的构成类别和消解特点。实验结果表明,污泥消解率可达到55%,且过程对出水水质不产生负面影响,水质指标均符合GB18918-2002要求。     

Biostability in distribution systems in one city in southern China：Characteristics, modeling and control strategy

This study investigated the bacterial regrowth in drinking water distribution systems receiving finished water from an advanced drinking water treatment plant in one city in southem China. Thirteen nodes in two water supply zones with different aged pipelines were selected to monitor water temperature, dissolved oxygen （DO）, chloramine residual, assimilable organic carbon （AOC）, and heterotrophic plate counts （HPC）. Regression and principal component analyses indicated that HPC had a strong correlation with chloramine residual. Based on Chick-Watson＇s Law and the Monod equation, biostability curves under different conditions were developed to achieve the goal of HPC 100 CFU/mL. The biostability curves could interpret the scenario under various AOC concentrations and predict the required chloramine residual concentration under the condition of high AOC level. The simulation was also carded out to predict the scenario with a stricter HPC goal （≤50 CFU/mL） and determine the required chloramine residual. The biological regrowth control strategy was assessed using biostability curve analysis. The results indicated that maintaining high chloramine residual concentration was the most practical way to achieve the goal of HPC ≤ 100 CFU/mL. Biostability curves could be a very useful tool for biostability control in distribution systems. This work could provide some new insights towards biostability control in real distribution systems.     

高效水解酸化UASB活性污泥的菌群结构分析

采用454高通量测序技术对低能耗、低污泥产量且具有脱氮效能的印染废水处理工艺中UASB污泥的微生物菌群结构进行了分析.结果表明,UASB内污泥的微生物菌种呈多样性分布且优势菌群突出,通过菌群鉴定发现,脱硫橄榄样菌属(Desulfobacula)、Levilinea、长绳菌属(Longilinea)、Candidatus Tammella、Paludibacter、索氏菌属(Thauera)、Tepidimicrobium、杆状脱硫菌属(Desulforhabdus)、类芽孢杆菌属(Paenibacillus)、梭菌属(Clostridium)是主要的优势菌属.其中,梭菌属是起到产酸和污泥减量作用的主要菌种.另外,具有脱氮效能的原因可能是由于发生了硫酸盐型厌氧氨氧化作用.通过Shannon、Chao、Simpson、Shannon指数的计算,发现该UASB中微生物较其他废水处理系统,群落结构拥有较高的多样性和丰度,有利于稳定产酸.     

贵州喀斯特地区土壤细菌群落结构特征及变化

为探明贵州喀斯特不同植被演替群落下的土壤细菌群落结构及变化特征,本文利用高通量测序技术对5个主要植被演替群落(稀灌草丛、藤刺灌丛、灌木林、乔灌过渡林、乔木林)的根际(竹叶椒)、非根际土壤细菌群落结构及环境因子进行了分析研究。结果表明:贵州喀斯特高原土壤细菌类群主要为变形菌门(Proteobacteria)、酸杆菌门(Acidobacteria)、疣微菌门(Verrucomicrobia)、放线菌门(Actinobacteria)、厚壁菌门(Firmicutes)、拟杆菌门(Bacteroidetes)和浮霉菌门(Planctomycetes),其相对丰富度分别为43.35%、12.97%、7.53%、7.12%、6.19%、5.35%、5.05%,未分类类群占7.36%。样品中检测到了较低丰度的广古菌门和泉古菌门。随植被群落演替,根际土壤中变形菌门、厚壁菌门和浮霉菌门丰度逐渐增加;非根际土壤中酸杆菌门和疣微菌门丰度随植被演替逐渐减小。贵州喀斯特高原土壤细菌的影响因子大小为土壤有机碳、土壤总氮、含水量、电导率等,其中土壤有机碳和土壤总氮有显著性影响。     

Effects of salinity on soil bacterial and archaeal community in estuarine wetlands and its implications for carbon sequestration: verification in the Yellow River Delta

Soils from two typical tidal salt marshes with varied salinity in the Yellow River Delta wetland were analysed to determine possible effects of salinity on soil carbon sequestration through changes in soil microbiology. The mean soil respiration (SR) of the salt water–fresh water mixing zone (MZ) was 2.89 times higher than that of the coastal zone (CZ) (4.73 and 1.63?μmol?m^?2?s^?1, respectively, p?Pseudomonas sp. and Limnobacter sp. that might have led to its higher dehydrogenase activity and respiratory rates. Additionally, the CZ possessed more Halobacteria and Thaumarchaeota with the ability to fix CO₂ than the MZ. Significantly lower soil salinity in MZ (4.25?g?kg^?1) was suitable for β-Proteobacteria, but detrimental for Halobacteria compared with CZ (7.09?g?kg^?1, p?相似文献   

基于高通量测序的工业园区地下水和土壤细菌群落结构比较研究

为探究工业园区地下水和土壤细菌群落结构、多样性变化特征,采用高通量测序技术对地下水和土壤细菌16S r RNA基因高变区域进行序列测定。通过对Alpha多样性、物种组成、丰度和群落结构的分析,比较地下水和土壤细菌群落结构的异同。Alpha多样性的比较结果表明,土壤细菌群落多样性和丰富度明显高于地下水,地下水细菌群落多样性指数反映出地下水已受到周边污染源的影响。物种注释结果表明,地下水样品共检出48个细菌门,土壤样品共检出50个细菌门。变形菌门(Proteobacteria)、拟杆菌门(Bacteroidetes)和厚壁菌门(Firmicutes)是地下水细菌群落的优势类群,共占93.54%,且该工业园区地下水细菌群落呈现出典型的淡水种群特征;土壤中优势细菌门为Proteobacteria、放线菌门(Actinobacteria)、酸杆菌门(Acidobacteria)、Firmicutes和芽单胞菌门(Gemmatimonadetes),共占85.21%。由于地下水和土壤两者的生态系统和理化环境的差异,致使Actinobacteria、Acidobacteria、绿弯菌门(Chloroflexi)、硝化螺旋菌门(Nitrospirae)、α-变形菌纲(Alphaproteobacteria)、δ-变形菌纲(Deltaproteobacteria)和Gemmatimonadetes占比在地下水和土壤细菌群落间差异显著,同时使地下水和土壤细菌群落各含有一些特有的优势细菌属(地下水2个,土壤4个)。基于高通量测序技术对工业园区样品的测序结果可以为地下水和土壤环境的生态评价提供方法依据。