DNA Heat Treatment for Improving qPCR Analysis of Human Adenovirus in Wastewater

PCR inhibitory substances in complex sample matrices can cause false negatives or under-estimation of target concentration. This study assessed DNA heat treatment for reducing inhibition during qPCR analysis of human adenovirus (HAdV) in wastewater samples. Inhibition was reduced by heat treating DNA, where mean HAdV concentration was increased by 0.71 log₁₀ GC/L (and up to 3.04 log₁₀ GC/L in one case), and replicate variability and false negatives were reduced. DNA heat treatment should be further investigated for improving reliability of HAdV concentration estimates in water, which can support more accurate assessment of health risks associated with viral pathogen exposure.     

The effect of cadmium ion on the growth,photosynthesis, and nitrogenase activity of Anabaenainaequalis

The growth of $\text{Anabaena}$$\text{inaequalis}$ was significantly inhibited by Cd²⁺ concentrations greater than 0.02 ppm (μg/ml) and completely inhibited at 0.06 ppm (Day 12). Cadmium had no significant effect upon the lag phase of growth or the culture doubling time, but caused the retardation phase to arrive sooner. One ppm Cd²⁺ significantly inhibited the rates of both photosynthesis and acetylene reduction, by $\text{A}$. $\text{inaequalis}$, with complete inhibition at 4 and 20 ppm respectively. Cell sensitivity increased directly with exposure time. Cadmium caused some cell lysis of $\text{A}$. $\text{inaequalis}$ and induced an increase in filament length, heterocyst frequency, and a loss of cellular contents from filament apical cells. The cellular abnormalities observed and the fact that toxicity increased with longer exposure times, suggested that metal toxicity resulted from effects of Cd²⁺ taken up by cells rather than Cd²⁺ at the cell surface.     

A Method for Ensemble Wildland Fire Simulation

An ensemble simulation system that accounts for uncertainty in long-range weather conditions and two-dimensional wildland fire spread is described. Fuel moisture is expressed based on the energy release component, a US fire danger rating index, and its variation throughout the fire season is modeled using time series analysis of historical weather data. This analysis is used to characterize the seasonal trend in ERC, autocorrelation of residuals, and daily standard deviation and stochastically generate artificial time series of afternoon fuel moisture. Daily wind speed and direction are sampled stochastically from joint probabilities of historical wind speed and direction for the date range of the fire simulation period. Hundreds or thousands of fire growth simulations are then performed using the synthetic fire weather sequences. The performance of these methods is evaluated in terms of the number of ensemble member simulations, one- versus two-dimensional fire spread simulations, and comparison with results from 91 fires occurring from 2007 to 2009. Simulations were found to be in consistent agreement with observations, but trends indicate that the ensemble average of simulated fire sizes were consistently larger than actual fires whereas the farthest extent burned by fires was underestimated.     

Polyacrylamide + Al2(SO4)3 and polyacrylamide + CaO remove coliform bacteria and nutrients from swine wastewater

Animal wastes are a major contributor of nutrients and enteric microorganisms to surface water and ground water. Polyacrylamide (PAM) mixtures are an effective flocculent, and we hypothesized that they would reduce transport of microorganisms in flowing water. After waste water running at 60.0 1 min(-1) flowed over PAM + Al2(SO4)3, or PAM + CaO in furrows, total coliform bacteria (TC) and fecal coliform bacteria (FC) were reduced by 30-50% at 1 and 50 m downstream of the treatments compared to the control. In a column study, PAM + Al2(SO4)3, and PAM + CaO applied to sandy, sandy loam, loam, and clay soils reduced NH4+ and ortho-P concentrations in leachate compared to the source waste water and the control. PAM + Al2(SO4)3 and PAM + CaO applied to sandy, sandy loam and loam soils reduced both total and ortho-P, concentrations in leachate compared to he source wastewater and control treatment. In a field study, PAM + Al2(SO4)3, or PAM + CaO treatments did not consistently reduce NH4+, NO3-, ortho-P, and total P concentrations in wastewater flowing over any soil compared to inflow wastewater or the control treatment. With proper application PAM + Al2(SO4)3 and PAM + CaO may be able to reduce the numbers of enteric bacteria in slowly flowing wastewater running off animal confinement areas, reducing the amount of pollutants entering surface water and groundwater.     

Wool-waste as organic nutrient source for container-grown plants

A container experiment was conducted to test the hypothesis that uncomposted wool wastes could be used as nutrient source and growth medium constituent for container-grown plants. The treatments were: (1) rate of wool-waste application (0 or unamended control, 20, 40, 80, and 120 g of wool per 8-in. pot), (2) growth medium constituents [(2.1) wool plus perlite, (2.2) wool plus peat, and (2.3) wool plus peat plus perlite], and (3) plant species (basil and Swiss chard). A single addition of 20, 40, 80, or 120 g of wool-waste to Swiss chard (Beta vulgaris L.) and basil (Ocimum basilicum L.) in pots with growth medium provided four harvests of Swiss chard and five harvests of basil. Total basil yield from the five harvests was 1.6–5 times greater than the total yield from the unamended control, while total Swiss chard yield from the four harvests was 2–5 times greater relative to the respective unamended control. The addition of wool-waste to the growth medium increased Swiss chard and basil tissue N, and NO₃–N and NH₄–N in growth medium relative to the unamended control. Scanning electron microscopy (SEM) and energy dispersive X-ray (EDX) microanalysis of wool fibers sampled at the end of the experiments indicated various levels of decomposition, with some fibers retaining their original surface structure. Furthermore, most of the wool fibers’ surfaces contained significant concentrations of S and much less N, P, or K. SEM/EDX revealed that some plant roots grow directly on wool-waste fibers suggesting either (1) root directional growth towards sites with greater nutrient concentration and/or (2) a possible role for roots or root exudates in wool decomposition. Results from this study suggest that uncomposted wool wastes can be used as soil amendment, growth medium constituent, and nutrient source for container-grown plants.     

Modeling the Spatially Varying Water Balance Processes in a Semiarid Mountainous Watershed of Idaho1

Stratton, Benjamin T., Venakataramana Sridhar, Molly M. Gribb, James P. McNamara, and Balaji Narasimhan, 2009. Modeling the Spatially Varying Water Balance Processes in a Semiarid Mountainous Watershed of Idaho. Journal of the American Water Resources Association (JAWRA) 45(6):1390‐1408. Abstract: The distributed Soil Water Assessment Tool (SWAT) hydrologic model was applied to a research watershed, the Dry Creek Experimental Watershed, near Boise Idaho to investigate its water balance components both temporally and spatially. Calibrating and validating SWAT is necessary to enable our understanding of the water balance components in this semiarid watershed. Daily streamflow data from four streamflow gages were used for calibration and validation of the model. Monthly estimates of streamflow during the calibration phase by SWAT produced satisfactory results with a Nash Sutcliffe coefficient of model efficiency 0.79. Since it is a continuous simulation model, as opposed to an event‐based model, it demonstrated the limited ability in capturing both streamflow and soil moisture for selected rain‐on‐snow (ROS) events during the validation period between 2005 and 2007. Especially, soil moisture was generally underestimated compared with observations from two monitoring pits. However, our implementation of SWAT showed that seasonal and annual water balance partitioning of precipitation into evapotranspiration, streamflow, soil moisture, and drainage was not only possible but closely followed the trends of a typical semiarid watershed in the intermountain west. This study highlights the necessity for better techniques to precisely identify and drive the model with commonly observed climatic inversion‐related snowmelt or ROS weather events. Estimation of key parameters pertaining to soil (e.g., available water content and saturated hydraulic conductivity), snow (e.g., lapse rates, melting), and vegetation (e.g., leaf area index and maximum canopy index) using additional field observations in the watershed is critical for better prediction.     

Phosphorus losses through agricultural tile drainage in Nova Scotia, Canada

Tile drainage water from agricultural fields commonly exceeds environmental guidelines for phosphorus (P) in rivers and streams. The loss of P through artificial drainage is spatially and temporally variable, and is related to local factors. This study characterizes variability in total P (TP) and soluble reactive P (SRP) concentrations in weekly drainage samples from 39 agricultural fields in Nova Scotia, Canada, from April 2002 through December 2003. We examined connections between P concentrations and the factors: (i) soil texture; (ii) discharge flow rate; (iii) soil test P (STP); (iv) manure type; and (v) crop cover. Generally, variability between fields and samples was great, and fields with standard deviations exceeding the mean for TP, SRP, and flow rate were 71, 54, and 79%, respectively. It was evident that poultry and swine manure contributed to high STPs, and to constantly high TP concentrations with high proportions of SRP. Concentrations varied from week to week, and particularly in April, May, October, and November when the greatest TP, SRP, and flow rate averages were measured. Mean TP concentrations exceed the USEPA (1994) TP guideline of 0.10 mg L(-1) at 82% of the fields, and periodically concentrations more than 10 times, and occasionally more than 50 times higher than the guideline were found. The proportion of SRP in TP had a tendency to be higher when TP levels were high in coarse textured soils. In Nova Scotia, dairy manure is most often applied on permanent cover crops, which did not show as much P concentration variability as crop rotations. Daily or hourly observation of short-term increases in P concentrations related to the described factors would help to characterize the changes in P concentrations observed during frequent heavy drainage flow events.     

Effect of acetone on the toxicity of atrazine towards photosynthesis in Anabaena

The effect of acetone on the toxicity of atrazine towards photosynthesis in the blue-green algae Anabaena inaequalis, A. variabilis and A. cylindrica was investigated. The order of sensitivity to atrazine was A. inaequalis greater than A. variabilis greater than A. cylindrica. Acetone and atrazine interacted additively, antagonistically, and synergistically, depending upon the concentrations of acetone and atrazine used. The EC50 of atrazine towards photosynthesis was dependent upon the type of solvent-pesticide interaction.     

Impacts of daily weather variability on simulations of the Canadian boreal forest

This study examines the importance of climate variability when simulating forest succession using a process-based model of stand development. The FORSKA-2V forest gap model, originally developed for forcing with monthly mean climate data, was modified to accept daily weather data. The model's performance was compared using different temporal resolutions of forcing along a bioclimatic transect crossing the boreal region of central Canada, including the aspen-parkland and forest-tundra ecotones. Forcing the model with daily weather data improved the simulation of key attributes of present-day forest along the transect, particularly at the ecotones, compared to forcing with monthly data or long term averages. The results support the hypothesis that climatic variability at daily time-scales is an important determinant of present-day boreal forest composition and productivity. To simulate boreal forest response to climatic change it will be necessary to create climatic scenarios that include plausible projections of future daily scale variability.     

Ammonia emissions from surface flow and subsurface flow constructed wetlands treating dairy wastewater

Agricultural wastewater treatment is important for maintaining water quality, and constructed wetlands (CW) can be an effective treatment option. However, some of the N that is removed during treatment can be volatilized to the atmosphere as ammonia (NH(3)). This removal pathway is not preferred because it negatively impacts air quality. The objective of this study was to assess NH(3) volatilization from surface flow (SF) and subsurface flow (SSF) CWs. Six CWs (3 SF and 3 SSF; 6.6 m(2) each) were loaded with dairy wastewater ( approximately 300 mg L(-1) total ammoniacal nitrogen, TAN = NH(3)-N + NH(4)(+)-N) in Nova Scotia, Canada. From June through September 2006, volatilization of NH(3) during 12 or 24 h periods was measured using steady-state chambers. No differences (p > 0.1) between daytime and nighttime fluxes were observed, presumably due in part to the constant airflow inside the chambers. Changes in emission rates and variability within and between wetland types coincided with changes in the vegetative canopy (Typha latifolia L.) and temperature. In SSF wetlands, the headspace depth also appeared to affect emissions. Overall, NH(3) emissions from SF wetlands were significantly higher than from SSF wetlands. The maximum flux densities were 974 and 289 mg NH(3)-N m(-2) d(-1) for SF and SSF wetlands, respectively. Both wetland types had similar TAN mass removal. On average, volatilization contributed 9 to 44% of TAN removal in SF and 1 to 18% in SSF wetlands. Results suggest volatilization plays a larger role in N removal from SF wetlands.