Prenatal diagnosis of medium-chain acyl-CoA dehydrogenase (MCAD) deficiency in a family with a previous fatal case of sudden unexpected death in childhood

Medium-chain acyl-CoA dehydrogenase (MCAD) deficiency is a potentially fatal inherited disease with a carrier frequency of approximately 1:100 in most Caucasian populations. The disease is implicated in sudden unexpected death in childhood. A prevalent disease-causing point mutation (A985G) in the MCAD gene has been characterized, thus rendering diagnosis easy in the majority of cases. Since the clinical spectrum of MCAD deficiency ranges from death in the first days of life to an asymptomatic life, there are probably other genetic factors—in addition to MCAD mutations—involved in the expression of the disease. Thus, families who have experienced the death of a child from MCAD deficiency might have an increased risk of a seriously affected subsequent child. In such a family we have therefore performed a prenatal diagnosis on a chorionic villus sample by a highly specific and sensitive polymerase chain reaction (PCR) assay for the G985 mutation. The analysis was positive and resulted in abortion. We verified the diagnosis by direct analysis on blood spots and other tissue material from the aborted fetus and from family members.     

Numerical analysis of water and solute transport in variably-saturated fractured clayey till

This study numerically investigates the influence of initial water content and rain intensities on the preferential migration of two fluorescent tracers, Acid Yellow 7 (AY7) and Sulforhodamine B (SB), through variably-saturated fractured clayey till. The simulations are based on the numerical model HydroGeoSphere, which solves 3D variably-saturated flow and solute transport in discretely-fractured porous media. Using detailed knowledge of the matrix, fracture, and biopore properties, the numerical model is calibrated and validated against experimental high-resolution tracer images/data collected under dry and wet soil conditions and for three different rain events. The model could reproduce reasonably well the observed preferential migration of AY7 and SB through the fractured till, although it did not capture the exact depth of migration and the negligible impact of the dead-end biopores in a near-saturated matrix. A sensitivity analysis suggests fast flow mechanisms and dynamic surface coating in the biopores, and the presence of a plough pan in the till.     

Variation of MCPA, metribuzine, methyltriazine-amine and glyphosate degradation, sorption, mineralization and leaching in different soil horizons

Pesticide mineralization and sorption were determined in 75 soil samples from 15 individually drilled holes through the vadose zone along a 28 km long transect of the Danish outwash plain. Mineralization of the phenoxyacetic acid herbicide MCPA was high both in topsoils and in most subsoils, while metribuzine and methyltriazine-amine was always low. Organic matter and soil pH was shown to be responsible for sorption of MCPA and metribuzine in the topsoils. The sorption of methyltriazine-amine in topsoil was positively correlated with clay and negatively correlated with the pH of the soil. Sorption of glyphosate was tested also high in the subsoils. One-dimensional MACRO modeling of the concentration of MCPA, metribuzine and methyltriazine-amine at 2 m depth calculated that the average concentration of MCPA and methyltriazine-amine in the groundwater was below the administrative limit of 0.1 μg/l in all tested profiles while metribuzine always exceeded the 0.1 μg/l threshold value.     

Xanthoria parietina as a monitor of ground-level ambient ammonia concentrations

Total nitrogen in transplanted and in situ lichen thalli of Xanthoria parietina were related to ambient ammonia air concentrations measured with passive ALPHA (Adapted Low-cost Passive High Absorption) diffusion samplers in Denmark. Transplants and ALPHA samplers were exposed four months in a transect on heathland close to a pig farm. Monthly mean ammonia concentrations declined exponentially approaching background levels after 300 m. Nitrogen content of the lichen transplants tended to decline with distance, though only a few stations were significantly different from each other. Where ammonia concentrations were high, maximum content of nitrogen was reached after one month of exposure. Conversely, at sites with background concentrations, it took several months to reach a statistically significant uptake. The correlation between ammonia concentration in the air and in situ X. parietina was significant.     

Life Cycle Assessment of fossil energy use and greenhouse gas emissions in Chinese pear production

A Life Cycle Assessment (LCA) was performed to analyze environmental consequences of different pear production chains in terms of fossil energy use and greenhouse gas (GHG) emission in China. The assessment identified hotspots that contributed significantly to the environmental impacts of pear production from the cradle to the point of sale. The results showed that GHG emissions and fossil energy use varied in the different production chains because the environmental performance does not associate with the farming systems (i.e. organic vs. conventional), but is co-determined by farm topography and thus machinery use, by market demands to seasonality of products and thus the need for storage, and by local farming practices including manure management. The LCA could be used as a tool to guide selections of agricultural inputs with the aim of reducing environmental impacts. The results of the LCA analysis indicate that a list of choices are available to reduce energy use and GHG emission in the pear production chain, namely substitution of the traditional storage systems by an efficiently controlled atmosphere storage system, using manure for biogas production, conversion from the conventional farming to organic farming, and reduction of mechanical cultivation.     

Estimation of emission fluxes from a horizontal flux budget method, exemplified with determination of pesticide volatilization

The paper describes an experimental set-up designed to measure the volatilization of different pesticides after application under full-scale field conditions. The pesticides were sprayed around the circumference of a circle and measurements of meteorology and air concentrations of pesticides were taken in the centre of the circle. The paper describes how the dimensions like the radius of the circle and height of the mast in the experimental set-up are found from theoretical considerations. A method to increase the confidence of the flux calculations is described. It utilizes that several substances were applied simultaneously and that a certain parameter in the fitted concentration profiles depends on turbulence only and thus have the same value for all substances. The design was used during two campaigns, conducted on the same location, one during fall on bare soil and one in spring on a barley crop.     

Prediction of Pollen-Mediated Gene Flow Between Fields of Red Clover (<Emphasis Type="Italic">Trifolium pratense</Emphasis>)

Pollen-mediated gene flow between red clover fields by bumblebees is predicted by estimating or simulating the parameters in a gene flow model for insect-pollinated crops. Generally, the predicted level of gene flow was found to depend on the visiting bee species and the spatial arrangement of the red clover fields. When the fields are close to each other, the gene flow depends mainly on the typical foraging distance of the visiting bee species, but when the fields are far apart, the gene flow between red clover fields is more sensitive to the distances between red clover fields than to the actual bumblebee species that pollinates the fields. Using the suggested methodology, the gene flow may be predicted in different agricultural scenarios. For example, if the gene flow between red clover fields is mediated by Bombus terrestris and the red clover fields that were assumed to be quadrates with sides of 100 m are separated by 200 m, then the median gene flow is predicted to be 0.17%.     

Transport modes and pathways of the strongly sorbing pesticides glyphosate and pendimethalin through structured drained soils

Leaching of the strongly sorbing pesticides glyphosate and pendimethalin was evaluated in an 8-month field study focussing on preferential flow and particle-facilitated transport, both of which may enhance the leaching of such pesticides in structured soils. Glyphosate mainly sorbs to mineral sorption sites, while pendimethalin mainly sorbs to organic sorption sites. The two pesticides were applied in equal dosage to a structured, tile-drained soil, and the concentration of the pesticides was then measured in drainage water sampled flow-proportionally.The leaching pattern of glyphosate resembled that of pendimethalin, suggesting that the leaching potential of pesticides sorbed to either the inorganic or organic soil fractions is high in structured soils. Both glyphosate and pendimethalin leached from the root zone, with the average concentration in the drainage water being 3.5 and 2.7 μg L⁻¹, respectively. Particle-facilitated transport (particles >0.24 μm) accounted for only a small proportion of the observed leaching (13-16% for glyphosate and 16-31% for pendimethalin). Drain-connected macropores located above or in the vicinity of the drains facilitated very rapid transport of pesticide to the drains. That the concentration of glyphosate and pendimethalin in the drainage water remained high (>0.1 μg L⁻¹) for up to 7 d after a precipitation event indicates that macropores between the drains connected to underlying fractures were able to transport strongly sorbing pesticides in the dissolved phase. Lateral transport of dissolved pesticide via such discontinuities implies that strongly sorbing pesticides such as glyphosate and pendimethalin could potentially be present in high concentrations (>0.1 μg L⁻¹) in both water originating from the drainage system and the shallow groundwater located at the depth of the drainage system.     

True trisomy 15 mosaicism,detected by amniocentesis at 12 weeks of gestation and fetal echocardiography

A case of mosaicism of trisomy 15, with two-thirds of the cells trisomic, was detected at 12 weeks of gestation in amniotic fluid cell cultures obtained with the filtration technique. Ultrasound examination at 13 weeks showed a nodule protruding into the amniotic cavity which was speculated to be remnants of a co-twin, causing the trisomic cell line. At 20 weeks of gestation, a malformation scan (level III) was normal, but supplementary fetal echocardiography revealed a severe cardiac defect (mitral atresia and a ventricular septal defect). Fetal lymphocytes obtained by cordocentesis showed trisomy 15 mosaicism, but only in 5 per cent of the mitoses. After termination, the same percentage of trisomy 15 mosaicism was found in cells from skin and tendon as in the original early amniocentesis. No sign of earlier twinning was found in the placenta or membranes. We conclude that mosaicism in early amniotic fluid obtained by the filter technique in this case reflected the true karyotype accurately and that supplementary echocardiography added significantly to the interpretation of the clinical implications.