Resilience of Southwestern Amazon Forests to Anthropogenic Edge Effects

Abstract:  Anthropogenic edge effects can compromise the conservation value of mature tropical forests. To date most edge-effect research in Amazonia has concentrated on forests in relatively seasonal locations or with poor soils in the east of the basin. We present the first evaluation from the relatively richer soils of far western Amazonia on the extent to which mature forest biomass, diversity, and composition are affected by edges. In a southwestern Amazonian landscape we surveyed woody plant diversity, species composition, and biomass in 88 × 0.1 ha samples of unflooded forest that spanned a wide range in soil properties and included samples as close as 50 m and as distant as >10 km from anthropogenic edges. We applied Mantel tests, multiple regression on distance matrices, and other multivariate techniques to identify anthropogenic effects before and after accounting for soil factors and spatial autocorrelation. The distance to the nearest edge, access point, and the geographical center of the nearest community ("anthropogenic-distance effects") all had no detectable effect on tree biomass or species diversity. Anthropogenic-distance effects on tree species composition were also below the limits of detection and were negligible in comparison with natural environmental and spatial factors. Analysis of the data set's capacity to detect anthropogenic effects confirmed that the forests were not severely affected by edges, although because our study had few plots within 100 m of forest edges, our confidence in patterns in the immediate vicinity of edges is limited. It therefore appears that the conservation value of most "edge" forests in this region has not yet been compromised substantially. We caution that because this is one case study it should not be overinterpreted, but one explanation for our findings may be that western Amazonian tree species are naturally faster growing and more disturbance adapted than those farther east.     

Evaluating the Predicted Local Extinction of a Once-Common Mouse

Abstract:  In an earlier paper ( Pergams & Nyberg 2001 ) we found that the proportion of the prairie deer mouse ( Peromyscus maniculatus bairdii ), among all local Peromyscus museum specimens collected in the Chicago region, had significantly declined over time. This proportion changed from about 50% before 1900 to <10% in the last 25 years. Based on this proportion a regression model predicted the local extinction of the prairie deer mouse in 2009. To evaluate that prediction, we estimated current deer mouse abundance by live trapping small mammals at 15 preserves in Cook and Lake counties, Illinois (USA) at which prairie deer mice had previously been caught or that still contained their preferred open habitat. In 1900 trap nights, 477 mammals were caught, including 251 white-footed mice ( P. leucopus ), but only one prairie deer mouse. The observed proportion of Peromyscus that were prairie deer mice, 0.4%, was even lower than the 4.5% predicted for 2000. Here we also introduce a simple, new community proportions model, which for any given geographic region compares the proportions of species recently caught with the proportions of species in museums. We compared proportions of seven species collected in Cook and Lake counties and examined by Hoffmeister (1989) with proportions of these species that we caught. Ten percent of the museum community was prairie deer mice, but only 0.2% of our catch was. The current local scarcity of the prairie deer mouse is consistent with the regression-based prediction of its eminent local extinction. More conservation attention should be paid to changes in relative abundance of once-common species.     

The Role of Botanic Gardens in the Science and Practice of Ecological Restoration

Abstract: Many of the skills and resources associated with botanic gardens and arboreta, including plant taxonomy, horticulture, and seed bank management, are fundamental to ecological restoration efforts, yet few of the world's botanic gardens are involved in the science or practice of restoration. Thus, we examined the potential role of botanic gardens in these emerging fields. We believe a reorientation of certain existing institutional strengths, such as plant‐based research and knowledge transfer, would enable many more botanic gardens worldwide to provide effective science‐based support to restoration efforts. We recommend botanic gardens widen research to include ecosystems as well as species, increase involvement in practical restoration projects and training practitioners, and serve as information hubs for data archiving and exchange.     

Two‐Stage Recovery of Amphibian Assemblages Following Selective Logging of Tropical Forests

There is a lack of quantitative information on the effectiveness of selective‐logging practices in ameliorating effects of logging on faunal communities. We conducted a large‐scale replicated field study in 3 selectively logged moist semideciduous forests in West Africa at varying times after timber extraction to assess post logging effects on amphibian assemblages. Specifically, we assessed whether the diversity, abundance, and assemblage composition of amphibians changed over time for forest‐dependent species and those tolerant of forest disturbance. In 2009, we sampled amphibians in 3 forests (total of 48 study plots, each 2 ha) in southwestern Ghana. In each forest, we established plots in undisturbed forest, recently logged forest, and forest logged 10 and 20 years previously. Logging intensity was constant across sites with 3 trees/ha removed. Recently logged forests supported substantially more species than unlogged forests. This was due to an influx of disturbance‐tolerant species after logging. Simultaneously Simpson's index decreased, with increased in dominance of a few species. As time since logging increased richness of disturbance‐tolerant species decreased until 10 years after logging when their composition was indistinguishable from unlogged forests. Simpson's index increased with time since logging and was indistinguishable from unlogged forest 20 years after logging. Forest specialists decreased after logging and recovered slowly. However, after 20 years amphibian assemblages had returned to a state indistinguishable from that of undisturbed forest in both abundance and composition. These results demonstrate that even with low‐intensity logging (≤3 trees/ha) a minimum 20‐year rotation of logging is required for effective conservation of amphibian assemblages in moist semideciduous forests. Furthermore, remnant patches of intact forests retained in the landscape and the presence of permanent brooks may aid in the effective recovery of amphibian assemblages. Recuperación de Ensambles de Anfibios en Dos Etapas Después de la Tala Selectiva de Bosques Tropicales     

Effect of Vegetation Matrix on Animal Dispersal: Genetic Evidence from a Study of Endangered Skinks

Abstract:  Maintaining connectivity in fragmented landscapes is a key principle of biological conservation. Although corridors are a widely accepted approach to connecting populations, their merits are still debated, and they may be impractical in many situations. A focus on management of the vegetation matrix between populations has been advocated as an alternative way to deal with habitat fragmentation and has theoretical support. We combined microsatellite DNA and demographic data to provide an empirical account of how two forms of agricultural land use affect the connectivity of insular populations of an endangered skink in southern New Zealand. The grand skink ( Oligosoma grande ) lives in small populations (approximately 20 individuals) on rock outcrops separated from one another by 50–150 m of inhospitable matrix vegetation (either native tussock grassland or exotic pasture). Skinks typically dispersed short distances, and the nature of the matrix both quantitatively and qualitatively affected dispersal dynamics. Skink populations in pasture were significantly more genetically structured and had less genetic variation than similar populations in tussock, implying less dispersal between populations in pasture than tussock. Furthermore, although female-biased dispersal was a feature of populations in tussock, no sex bias was evident in pasture. In addition, Bayesian individual-based genetic assignment tests that incorporated prior mark-recapture information revealed that some populations produced many emigrants but received few immigrants, whereas other populations were relatively insular. Patterns of dispersal and response to matrix vegetation were complex, and the causes of these patterns deserve attention in future studies of habitat fragmentation. Managing the vegetation matrix may be a practical way to connect animal populations in some situations.