Mapping of temperature and line-of-sight errors in constituent retrievals for MIPAS/ENVISAT measurements

An optimized code for the near real-time retrieval of line of sight, temperature and volume-mixing ratio profiles of five key species (O₃, H₂O, HNO₃, CH₄ and N₂O) from infrared limb spectra recorded by the Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) experiment on board the ENVISAT-1 satellite was developed as part of an ESA-supported study. In this code line of sight and temperature are retrieved simultaneously among themselves, but sequentially with respect to the volume-mixing ratio of the five key species. The sequential retrieval leaves unaccounted the mapping of line of sight and temperature errors in the retrieved volume-mixing ratio of the constituents. This paper illustrates an algorithm that provides the a-posteriori evaluation of temperature and line-of-sight-induced error on the retrieved volume-mixing ratio of the MIPAS key species. It is shown that in most cases temperature and line-of-sight-induced error provides a significant contribution to the total volume-mixing ratio error. The variability of this error as a function of latitude, season and atmospheric model is also analyzed.     

Assaying organochlorines in archived serum for a large, long-term cohort: implications of combining assay results from multiple laboratories over time

Conserving irreplaceable, archived serum samples may sometimes conflict with the objective of minimizing measurement error due to laboratory effects. We sought to determine whether we could successfully combine assay results for DDT-related compounds and polychlorinated biphenyls (PCBs) in serum from the same birth cohort obtained from different laboratories over time. Using the Child Health and Development Studies (CHDS) serum archive, we compared variability for assays of a quality control pool to variability for assays of subject serum. The quality control pool was created from native archived serum samples that were pooled, then aliquoted, blinded and inserted pair-wise into assay batches along with the subject serum for 5 studies using CHDS samples conducted over a 13year period by three different laboratories. We found that the variability between laboratory and over time within laboratory was small relative to inter-individual variability for p,p'-DDT (1,1,1-trichloro-2,2-bis(p-chlorophenyl)ethane), p,p'-DDE (1,1'-dichloro-2,2'-bis(p-chlorophenyl)ethylene) and o,p'-DDT (1,1,1-trichloro-2-(p-chlorophenyl)-2-(o-chlorophenyl)-ethane). Results were also consistent for most PCB congeners which were detectable in 85% or more of samples. Our results suggest that it is possible to combine assays for DDT and PCB congeners measured at positive levels as they are accumulated for cohort subjects without risking meaningful misclassification due to variation stemming from laboratory or time period. This has significant implications for future study costs, conservation of irreplaceable archived samples and for leveraging past investments for future research. For PCB congeners with very low levels, findings caution against pooling of assays without further exploration.     

Heavy metals monitoring at a Mediterranean natural ecosystem of Central Italy. Trends in different environmental matrixes

The study deals with the evaluation of the impact of heavy metal pollution on a Mediterranean natural ecosystem, and presents the results derived from a monitoring of heavy metals in different environmental matrixes (atmospheric dry depositions, suspended particulate matter (SPM) and stemflow of forest trees). Two sites in Castelporziano Presidential Estate (Rome), one internal and one near the sea-side, were chosen in order to assess the differences in pollutant load. Results showed that heavy metal contamination can arise from local anthropogenic activities, in particular road traffic, and long-range pollution, from industrial and artisan activities near Rome.     

Isolation and characterization of two actins of the Pacific white shrimp, <Emphasis Type="Italic">Litopenaeus vannamei</Emphasis>

Two actin genes named actinT1 and actinT2 were isolated and sequenced from the Pacific white shrimp, Litopenaeus vannamei, by screening from a shrimp eyestalk cDNA library. L. vannamei actinT1 cDNA has a 1,128-bp open reading frame encoding for 376 amino acids while L. vannamei actinT2 cDNA has a 1,131-bp open reading frame coding for 377 amino acids. Alignment of the actinT1 and actinT2 cDNA sequences showed that these two actin genes share a sequence identity of 86% at amino acid residues. When compared with actins of several other invertebrate and vertebrate species, the nucleotide sequence of actinT1 is highly homologous (97–100%) with beta-actins, while actinT2 shares 86–95% identity with alpha-actins on the nucleotide level. Phylogenetic analysis and BLAST searches indicated that the ActinT1 protein is identical to crustacean beta-actins, while the ActinT2 protein is highly homologous to crustacean alpha-actins. Constitutive expression of the actinT1 and actinT2 genes were detected by RT-PCR in all adult shrimp organs, including brain, eye-stalk, gill, heart, hemolymph, hepatopancreas, muscle, swimming legs, and stomach, as well as in the shrimp zygote, nauplius, and mysis life stages. These data will facilitate attempts to clone and identify more shrimp genes and constitutive shrimp promoters.     

Soluble and insoluble fractions of heavy metals in wet and dry atmospheric depositions in Bologna,Italy

Atmospheric depositions were collected monthly using a modified wet and dry sampler (dry deposition was collected on a water surface) located in Bologna, a northern Italian urban area, to evaluate the impact of airborne heavy metals on the local pollution load. Wet deposition samples were filtered and heavy metal contents in soluble and insoluble fractions were determined. The same procedure was applied to the water samples which collected dry deposition. The entire procedure was tested using a certified reference material (CRM), which provided satisfying recovery results. The percentage of heavy metal soluble fraction in dry deposition was generally lower than in wet one; Cd, V, Cu and Zn showed a higher average solubility than Cr, Ni and Pb both in wet and dry deposition. Factor analysis, after a varimax rotation of principal components, suggested possible anthropogenic sources which explain different metal deposition patterns. This data analysis also allowed to distinguish different clusters formed by monthly fluxes of heavy metals.