The effect of natural and anthropogenic disturbance in forest canopy and its effect on species richness in forests of Uttarakhand Himalaya,India

Pinus roxburghii (chir-pine) and Quercus leucothchophora (banj-oak) are dominant forests of mountainous part of the Uttarakhand Himalaya. The continued anthropogenic disturbance is opening the canopy, forming canopy gaps and as a result forest fragments are developing. Thus, the present study aims to analyze variations in species richness and vegetational parameters in relation to canopy gaps in forests. Total species richness was greater in open canopied forest compared to moderate and close canopied forests. In comparison between oak and pine forest, it was greater in oak forest while the proportion of common species was low between oak—pine forests. Mean species richness did not significantly vary from one canopy gap to another as well as in oak and pine dominated forest. This indicated that dominant forest types played an important role to form the community structure. The shrubs richness were greater in closed canopy and between the forests it was greater in pine forest. Tree and shrub density was low in open canopy while herb density was high in moderate canopy. Thus, this study indicated that the dominant canopy species play an important role in deciding the community structures especially the distribution of under canopy species. These parameters should be considered for conservation and maintenance of plant biodiversity of a region.     

Genetic considerations in the prenatal diagnosis of overgrowth syndromes

Large (>90%) for gestational age (LGA) fetuses are usually identified incidentally. Detection of the LGA fetus should first prompt the provider to rule out incorrect dates and maternal diabetes. Once this is done, consideration should be given to certain overgrowth syndromes, especially if anomalies are present. The overgrowth syndromes have significant clinical and molecular overlap, and are associated with developmental delay, tumors, and other anomalies. Although genetic causes of overgrowth are considered postnatally, they are infrequently diagnosed prenatally. Here, we review prenatal sonographic findings in fetal overgrowth syndromes, including Pallister-Killian, Beckwith-Wiedemann, Sotos, Perlman, and Simpson-Golabi-Behmel. We also discuss prenatal diagnosis options and recurrence risks. Copyright © 2009 John Wiley & Sons, Ltd.     

Dioxin formation in pulp and paper mills of India

Samples of effluents, sludge, pulp, final products (paper) and soil were collected from the identified pulp and paper mills in India. The samples were analysed for 2,3,7,8-tetrachloro-dibenzo-p-dioxin (2,3,7,8-TCDD) and other dioxin congeners and precursors. Pulp and paper mills using chlorine for the bleaching process showed the presence of 2,3,7,8-TCDD in effluent samples. In the effluent and pulp samples from mills where chlorine dioxide was used as a bleaching agent, the 2,3,7,8-TCDD congener ranged from below the detection limit 0.05 to 0.12 ngL⁻¹/ngg⁻¹. The relative standard deviation of reproducibility and the percent recovery of 2,3,7,8-TCDD were 2.07 and 82.4% in pulp and 2.8 and 92% in effluent, respectively. The 1,3,6,8-TCDD was the only other major dioxin congener found in the treated and untreated effluent and sludge samples. However, dichlorobenzene, trichlorophenyl, and hexachlorobiphenyl were detected in all samples. The formation of dioxins can be minimised by replacing chlorine with chlorine dioxide in bleaching processes in pulp and paper mills.     

Toxic metals in amniotic fluid and altered gene expression in cell-free fetal RNA

Both exposures to toxic metals, as well as deficiencies in essential metals, during pregnancy has been linked to a variety of negative reproductive outcomes. The exact etiologies of such outcomes and the effects of fetal exposure to these metals are largely unknown. Therefore, the ability to assess levels of these elements is critical to determining the underlying causes of such conditions and the effects that both essential and nonessential metals have on fetal development. Thus, using cell-free fetal RNA from amniotic fluid, we set out to measure the association between amniotic fluid levels of toxic and essential metals and fetal gene expression. We find that arsenic was associated with increased expression of 3 genes known to play roles in both birth-related and reproductive effects. The results highlight the potential for detrimental health effects of prenatal metals exposure and the potential to identify biomarkers of environmental exposure during this critical developmental period.     

Small-scale co-management for the sustainable use of Xilingol biosphere reserve, inner Mongolia

There exists a negative externality of livestock breeding due to the difference between private and social breeding cost in Xilingol Biosphere Reserve (XBR), Inner Mongolia, that has caused extensive ecological degradation of the grassland. The property rights regime, the household production responsibility system (HPRS), was adopted in the 1980s to increase livestock production in XBR. Although HPRS has successfully increased production by promoting private economic interests, it has led to grassland degradation due to inefficient enforcement of stock rate. Through interviews conducted with government representatives and herding families in all management units of XBR, we elucidate the shortfalls of the current management regime and the Fencing Grassland and Moving Users policy initiated in 2002 to restore grassland. We propose an alternative property rights regime, small-scale co-management, to concurrently promote both individual economic interests and grassland conservation by improving the enforcement of stock rate.     

Two unrelated fetuses with ITPR1 missense variants and fetal hydrops

We describe two fetuses from unrelated families with likely pathogenic variants in ITPR1 that presented with nonimmune fetal hydrops. Trio exome sequencing revealed a de novo heterozygous likely pathogenic missense variant c.7636G > A (p.Val2531Met) in ITPR1 (NM_001378452.1) in proband 1 and a de novo heterozygous likely pathogenic missense variant c.34G > A [p.Gly12Arg] in proband 2. Variants in ITPR1 have been associated with several genetic conditions, including spinocerebellar ataxia 15, spinocerebellar ataxia 29, and Gillespie syndrome. Our report on two patients details a previously undescribed severe fetal presentation of nonimmune hydrops fetalis associated with missense variants in the ITPR1 gene.     

New expansions in old clades: population genetics and phylogeny of Gnatholepis species (Teleostei: Gobioidei) in the Pacific

Species of the reef goby genus Gnatholepis exhibit enormous geographic ranges with little evidence of population segregation detectable based on mitochondrial DNA. To determine if genetic differentiation is evident with more rapidly evolving markers, seven microsatellite loci were screened from the species Gnatholepis anjerensis and G. scapulostigma and population segregation was tested among fish from across the South Pacific. Both AMOVA and pairwise F _ST analyses showed that, in concordance with previous mitochondrial results, most genetic variance occurs within individual populations, as population differentiation is evident only over the largest distances (>3,700 km). This result is contrasted with previous studies demonstrating that despite their relatively long larval periods, some gobiid fishes exhibit population differentiation on small (<100 km) geographic scales. Coalescence analysis showed that current Pacific populations of these species originated in the Pleistocene, presumably related to sea level fluctuations associated with episodes of glaciation. However, rate analysis based on a phylogeny of Gnatholepis species indicates that the species themselves are much older, consistent with a complex history of rapid, short-term population contractions and expansions, with corresponding rapid dispersal.     

Water quality assessment of Majhiaon block of Garwa district in Jharkhand with special focus on fluoride analysis

Fluoride in groundwater is known to contaminate the water sources globally. Jharkhand, one of the states in the eastern part of India, is known to have excessive fluoride content in groundwater sources. The present work involves assessment of water quality with special reference to fluoride in Majhiaon block of Garwa district in Jharkhand. Iron, nitrate and arsenic were also tested for the water samples collected from site. Eight hundred forty samples were tested for fluoride on site using colourimetry method, and one tenth of the samples were brought to laboratory for iron, nitrate, arsenic and fluoride analysis. Results show that 402 samples were having fluoride above permissible limit. Iron and nitrate were found to be beyond permissible limits in 302 and 286 water samples, respectively. More than 50% of samples collected from school had fluoride levels above permissible limits. Arsenic was well within the limits. However, few samples shown were excessive of iron and nitrate.