A Comparison of Spatial and Spectral Image Resolution for Mapping Invasive Plants in Coastal California

We explored the potential of detecting three target invasive species: iceplant (Carpobrotus edulis), jubata grass (Cortaderia jubata), and blue gum (Eucalyptus globulus) at Vandenberg Air Force Base, California. We compared the accuracy of mapping six communities (intact coastal scrub, iceplant invaded coastal scrub, iceplant invaded chaparral, jubata grass invaded chaparral, blue gum invaded chaparral, and intact chaparral) using four images with different combinations of spatial and spectral resolution: hyperspectral AVIRIS imagery (174 wavebands, 4 m spatial resolution), spatially degraded AVIRIS (174 bands, 30 m), spectrally degraded AVIRIS (6 bands, 4 m), and both spatially and spectrally degraded AVIRIS (6 bands, 30 m, i.e., simulated Landsat ETM data). Overall success rates for classifying the six classes was 75% (kappa 0.7) using full resolution AVIRIS, 58% (kappa 0.5) for the spatially degraded AVIRIS, 42% (kappa 0.3) for the spectrally degraded AVIRIS, and 37% (kappa 0.3) for the spatially and spectrally degraded AVIRIS. A true Landsat ETM image was also classified to illustrate that the results from the simulated ETM data were representative, which provided an accuracy of 50% (kappa 0.4). Mapping accuracies using different resolution images are evaluated in the context of community heterogeneity (species richness, diversity, and percent species cover). Findings illustrate that higher mapping accuracies are achieved with images possessing high spectral resolution, thus capturing information across the visible and reflected infrared solar spectrum. Understanding the tradeoffs in spectral and spatial resolution can assist land managers in deciding the most appropriate imagery with respect to target invasives and community characteristics.     

Boron toxicity in the rare serpentine plant, Streptanthus morrisonii

The release of boron-laden mist from the cooling towers of some geothermal power stations in northern California potentially threatens nearby populations of the rare serpentine plant, Streptanthus morrisonii F. W. Hoffm. To assess the tolerance of S. morrisonii to high levels of boron, the effect of boron on leaf condition, life history, germination rate, growth rate, allocation and photosynthesis was measured on plants grown in a greenhouse. Relative to other species, S. morrisonii was tolerant of excess boron. On serpentine soil, mild to moderate toxicity symptoms (older leaves exhibiting chlorosis and necrosis, but few leaves killed) were apparent when the boron concentration in applied nutrient solutions was 240-650 microm. Severe toxicity symptoms (significant leaf loss, young leaves with toxicity symptoms) were apparent when the applied solution was over 1000 microm boron. Above 1000 microm boron, S. morrisonii appeared unable to complete its life cycle. On a tissue basis, boron toxicity was first observed when leaf boron content was 40-90 micromol g(-1) dry weight. In leaves with severe boron toxicity (> 35% injury), the boron content was generally above 130 micromol g(-1) dry weight. These levels were an order of magnitude above the tissue boron content of plants in the field. Prior to the onset of pronounced boron toxicity symptoms, growth rate, allocation patterns, and photosynthesis were unaffected by high boron. These results indicate that inhibition of growth and photosynthesis occurred because of a loss of viable tissue due to boron injury, rather than a progressive decline as leaf boron levels increased.     

Using LiDAR Data Analysis to Estimate Changes in Insolation Under Large‐Scale Riparian Deforestation1

Greenberg, Jonathan Asher, Erin L. Hestir, David Riano, George J. Scheer, and Susan L. Ustin, 2012. Using LiDAR Data Analysis to Estimate Changes in Insolation Under Large‐Scale Riparian Deforestation. Journal of the American Water Resources Association (JAWRA) 48(5): 939‐948. DOI: 10.1111/j.1752‐1688.2012.00664.x Abstract: Riparian vegetation provides shade from insolation to stream channels. A consequence of removing vegetation may be an increase in insolation that can increase water temperatures and negatively impact ecosystem health. Although the mechanisms of riparian shading are well understood, spatially explicit, mechanistic models of shading have been limited by the data requirements of precisely describing the three‐dimensional structure of a riparian corridor. Remotely acquired, high spatial resolution LiDAR data provide detailed three‐dimensional vegetation structure and terrain topography over large regions. By parameterizing solar radiation models that incorporate terrain shadowing with LiDAR data, we can produce spatially explicit estimates of insolation. As a case study, we modeled the relative change in insolation on channels in the Sacramento‐San Joaquin River Delta under current conditions and under a hypothesized deforested Delta using classified LiDAR, rasterized at a 1‐m resolution. Our results suggest that the removal of levee vegetation could result in a 9% increase in solar radiation incident on Delta waters, and may lead to water temperature increases. General, coarse‐scale channel characteristics (reach width, azimuth, levee vegetation cover, and height) only accounted for 72% of the variation in the insolation. This indicates that the detailed information derived from LiDAR data has greater explanatory power than coarser reach‐scale metrics often used for insolation estimates.     

Mapping Invasive Aquatic Vegetation in the Sacramento-San Joaquin Delta using Hyperspectral Imagery

The ecological and economic impacts associated with invasive species are of critical concern to land managers. The ability to map the extent and severity of invasions would be a valuable contribution to management decisions relating to control and monitoring efforts. We investigated the use of hyperspectral imagery for mapping invasive aquatic plant species in the Sacramento-San Joaquin Delta in the Central Valley of California, at two spatial scales. Sixty-four flightlines of HyMap hyperspectral imagery were acquired over the study region covering an area of 2,139 km² and field work was conducted to acquire GPS locations of target invasive species. We used spectral mixture analysis to classify two target invasive species; Brazilian waterweed (Egeria densa), a submerged invasive, and water hyacinth (Eichhornia crassipes), a floating emergent invasive. At the relatively fine spatial scale for five sites within the Delta (average size 51 ha) average classification accuracies were 93% for Brazilian waterweed and 73% for water hyacinth. However, at the coarser, Delta-wide scale (177,000 ha) these accuracy results were 29% for Brazilian waterweed and 65% for water hyacinth. The difference in accuracy is likely accounted for by the broad range in water turbidity and tide heights encountered across the Delta. These findings illustrate that hyperspectral imagery is a promising tool for discriminating target invasive species within the Sacramento-San Joaquin Delta waterways although more work is needed to develop classification tools that function under changing environmental conditions.     

Building spectral libraries for wetlands land cover classification and hyperspectral remote sensing

Recent advances in remote sensing provide opportunities to map plant species and vegetation within wetlands at management relevant scales and resolutions. Hyperspectral imagers, currently available on airborne platforms, provide increased spectral resolution over existing space-based sensors that can document detailed information on the distribution of vegetation community types, and sometimes species. Development of spectral libraries of wetland species is a key component needed to facilitate advanced analytical techniques to monitor wetlands. Canopy and leaf spectra at five sites in California, Texas, and Mississippi were sampled to create a common spectral library for mapping wetlands from remotely sensed data. An extensive library of spectra (n=1336) for coastal wetland communities, across a range of bioclimatic, edaphic, and disturbance conditions were measured. The wetland spectral libraries were used to classify and delineate vegetation at a separate location, the Pacheco Creek wetland in the Sacramento Delta, California, using a PROBE-1 airborne hyperspectral data set (5m pixel resolution, 128 bands). This study discusses sampling and collection methodologies for building libraries, and illustrates the potential of advanced sensors to map wetland composition. The importance of developing comprehensive wetland spectral libraries, across diverse ecosystems is highlighted. In tandem with improved analytical tools these libraries provide a physical basis for interpretation that is less subject to conditions of specific data sets. To facilitate a global approach to the application of hyperspectral imagers to mapping wetlands, we suggest that criteria for and compilation of wetland spectral libraries should proceed today in anticipation of the wider availability and eventual space-based deployment of advanced hyperspectral high spatial resolution sensors.     

Reflectance properties and physiological responses of Salicornia virginica to heavy metal and petroleum contamination

Wetland ecosystems of California are located in highly populated areas and subject to high levels of contamination. Monitoring of wetlands to assess degrees of pollution damage requires periodic retrieval of information over large areas, which can be effectively accomplished by rapidly evolving remote sensing technologies. The biophysical principles of remote sensing of vegetation under stress need to be understood in order to correctly interpret the information obtained at the scale of canopies. To determine the potential to remotely characterize and monitor pollution, plants of Salicornia virginica, a major component of wetland communities in California, were treated with two metals and two crude oil types to study their sensitivity to pollutants and how this impacted their reflectance characteristics. Several growth and physiological parameters, as well as shoot reflectance were measured and correlated with symptoms and contamination levels. Significant differences between treatments were found in at least some of the measured parameters in all pollutants. Reflectance was sensitive to early stress levels only for cadmium and the lightweight petroleum. Pollutants that differ in their way of action also had different plant reflectance signatures. The high degree of correlation between reflectance features and stress indicators highlights the potential of using remote sensing to assess the type and degree of pollution damage.