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镉胁迫对芒草根际细菌群落结构、共发生网络和功能的影响
引用本文:陈兆进,林立安,李英军,陈彦,张浩,韩辉,吴乃成,Nicola Fohrer,李玉英,任学敏.镉胁迫对芒草根际细菌群落结构、共发生网络和功能的影响[J].环境科学,2021,42(8):3997-4004.
作者姓名:陈兆进  林立安  李英军  陈彦  张浩  韩辉  吴乃成  Nicola Fohrer  李玉英  任学敏
作者单位:南阳师范学院水资源与环境工程学院,河南省南水北调中线水源区流域生态安全国际联合实验室,南水北调中线水源区水安全河南省协同创新中心,南阳473061;南阳师范学院生命科学与农业工程学院,南阳473061;德国基尔大学水文与水资源管理系,基尔 24098
基金项目:国家自然科学基金;国家自然科学基金
摘    要:芒草(Miscanthus)作为第二代能源植物,已用于重金属污染土壤修复研究,但目前该过程中土壤细菌群落组成和功能研究开展较少.以芒草品种南荻(M.saccariflorus)为研究对象,通过高通量测序结合分子生态网络分析和PICRUSt功能预测,分析研究100 mg·kg-1 Cd的胁迫对芒草根际细菌群落组成、共发生网络和功能的影响.MiSeq测序表明芒草根际细菌群落由32个门和425个属的细菌组成,包含鞘氨醇单胞菌属(Sphingomonas)、芽孢杆菌属(Bacillus)、芽单胞菌属(Gemmatimonas)和链霉菌属(Streptomyces)等植物促生细菌(PGPR)种群.相似性分析(ANOSIM)和非参数多元方差分析(Adonis)表明,Cd的添加能显著影响芒草根际细菌群落组成,降低其群落多样性.同时分子生态网络分析表明Cd的添加降低了芒草根际细菌之间的相互作用,导致其网络结构更为简单;降低了网络缓冲环境变化的能力;提高了负相关连线数,使根际细菌物种之间的竞争关系更强;改变关键细菌组成.PICRUSt功能预测分析表明Cd的胁迫降低了芒草根际土壤细菌功能.本研究初步分析了芒草根际细菌群落组成及其对镉胁迫的响应,为后续调控芒草修复效率提供了基础.

关 键 词:镉污染  芒草  高通量测序  分子生态网络分析  PICRUSt分析
收稿时间:2020/11/23 0:00:00
修稿时间:2021/1/13 0:00:00

Shifts in Rhizosphere Bacterial Community Structure, Co-occurrence Network, and Function of Miscanthus Following Cadmium Exposure
CHEN Zhao-jin,LIN Li-an,LI Ying-jun,CHEN Yan,ZHANG Hao,HAN Hui,WU Nai-cheng,Nicola Fohrer,LI Yu-ying,REN Xue-min.Shifts in Rhizosphere Bacterial Community Structure, Co-occurrence Network, and Function of Miscanthus Following Cadmium Exposure[J].Chinese Journal of Environmental Science,2021,42(8):3997-4004.
Authors:CHEN Zhao-jin  LIN Li-an  LI Ying-jun  CHEN Yan  ZHANG Hao  HAN Hui  WU Nai-cheng  Nicola Fohrer  LI Yu-ying  REN Xue-min
Institution:International Joint Laboratory of Watershed Ecological Security and Collaborative Innovation Center of Water Security for Water Source Region of Middle Route Project of South-North Water Diversion in Henan Province, School of Water Resources and Environmental Engineering, Nanyang Normal University, Nanyang 473061, China;School of Life Science and Agricultural Engineering, Nanyang Normal University, Nanyang 473061, China;Department of Hydrology and Water Resources Management, University of Kiel, Kiel 24098, Germany
Abstract:As a representative of second-generation bioenergy plants, Miscanthus has received increasing attention in the studies of heavy metal (HM)-contaminated soil remediation. Currently, few studies have examined the effects of using Miscanthus to remediate HM-contaminated soils on the composition and function of microbial communities. In this study, the Miscanthus cultivar M. saccariflorus was examined for its tolerance and enrichment abilities when grown in soils containing 100 mg ·kg-1 of cadmium (Cd). The structure, function, and co-occurrence network of their rhizosphere bacterial communities were analyzed during the remediation process. MiSeq sequencing showed that the Miscanthus rhizosphere bacterial community comprised 32 phyla and 425 genera, including plant growth-promoting rhizobacteria (PGPR), such as Sphingomonas, Bacillus, Gemmatimonas, and Streptomyces. The addition of Cd affected the Miscanthus rhizosphere bacterial community and reduced community diversity. Phylogenetic molecular ecological networks indicated that Cd addition reduced the interactions between Miscanthus rhizosphere bacteria to generate a simpler network structure, increased the number of negative-correlation links, enhanced the competition between rhizosphere bacterial species, and changed the composition of key bacteria. PICRUSt functional predictive analysis indicated that Cd stress reduced soil bacterial functions in the Miscanthus rhizosphere. The results of this study provide a reference for the subsequent regulation of efficient Miscanthus remediation by PGPRs or key bacteria.
Keywords:cadmium contamination  Miscanthus  high-throughput sequencing  phylogenetic molecular ecological networks  PICRUSt analysis
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