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长江口近岸地区抗生素抗性基因与微生物群落分布特征
引用本文:徐秋鸿,刘曙光,娄厦,Larisa Dorzhievna Radnaev,Elena Nikitin,Makhinov Aleksei Nikolavich,Araruna José Tavares,金宇辰,李鑫.长江口近岸地区抗生素抗性基因与微生物群落分布特征[J].环境科学,2023,44(1):158-168.
作者姓名:徐秋鸿  刘曙光  娄厦  Larisa Dorzhievna Radnaev  Elena Nikitin  Makhinov Aleksei Nikolavich  Araruna José Tavares  金宇辰  李鑫
作者单位:同济大学水利工程系, 上海 200092;同济大学水利工程系, 上海 200092;长江水环境教育部重点实验室, 上海 200092;Laboratory of Chemistry of Natural Systems, Baikal Institute of Nature Management of Siberian Branch of the Russian Academy of Sciences, Republic of Buryatia, Republic of Buryatia 670000, Russian;Institute of Water and Ecology Problems, Far East Branch, Russian Academy of Sciences, Khabarovsk 680000, Russia;Pontifical Catholic University of Rio de Janeiro, Rio de Janeiro 999074, Brazil
基金项目:国家自然科学基金项目(51961145106,42072281);上海市创新行动计划项目(20230742500,22ZR1464200,22230712900);中央高校基本科研业务费专项(22120210576);土木工程I类高峰学科建设项目(2022-3-YB-03)
摘    要:由于抗生素的大量使用,环境中微生物对抗生素的抗性不断增加,抗生素抗性基因(ARGs)问题越来越严重,严重威胁生态安全和人类健康.为研究长江口近岸地区水体和底泥沉积物中的ARGs和微生物群落的分布特征,通过野外调查采集了8个站点的水样和沉积物样本,对2种磺胺类抗性基因(sul1、sul2)、6种四环素类抗性基因(tetM、tetC、tetX、tetA、tetO、tetQ)、1种整合子基因intI1、16S rRNA基因和微生物群落进行检测分析.结果表明,长江口近岸地区10种抗性基因的检出率为100%.其中,整合子基因intI1和水样中多种ARGs呈显著正相关关系.变形菌门(Proteobacteria)和拟杆菌门(Bacteroidota)是长江口近岸地区水环境中的优势菌门;Chloroplast为水体中的主要菌属,Chloroplast和Nitrospira为沉积物中的主要菌属.在水体中,硝化螺旋菌门(Nitrospirota)是4种四环素类抗性基因(tetX、tetA、tetO和tetQ)共同的潜在宿主;在沉积物中,Sva0485是sul1和intI1的共同潜在宿主.微生物群落的分布...

关 键 词:抗生素抗性基因(ARGs)  荧光定量PCR(qPCR)  16S扩增子测序  长江口近岸地区  微生物群落
收稿时间:2022/3/17 0:00:00
修稿时间:2022/5/7 0:00:00

Distributions of Antibiotic Resistance Genes and Microbial Communities in the Nearshore Area of the Yangtze River Estuary
Institution:Department of Hydraulic Engineering, Tongji University, Shanghai 200092, China;Department of Hydraulic Engineering, Tongji University, Shanghai 200092, China;Key Laboratory of Yangtze River Water Environment, Ministry of Education, Shanghai 200092, China;Laboratory of Chemistry of Natural Systems, Baikal Institute of Nature Management of Siberian Branch of the Russian Academy of Sciences, Republic of Buryatia, Republic of Buryatia 670000, Russian;Institute of Water and Ecology Problems, Far East Branch, Russian Academy of Sciences, Khabarovsk 680000, Russia;Pontifical Catholic University of Rio de Janeiro, Rio de Janeiro 999074, Brazil
Abstract:Due to the extensive use of antibiotics, the resistance of microorganisms to antibiotics in the environment is increasing, and the problem of antibiotic resistance genes (ARGs) is becoming more and more severe, which seriously threatens ecological security and human health. In order to study the distribution characteristics of ARGs and the microbial community in different media in the coastal area of the Yangtze River Estuary, water and sediment samples from eight sites were collected through a field investigation. Two sulfonamide resistance genes (STBX]sul1, sul2STBZ]) and six tetracycline resistance genes (tetM, tetC, tetX, tetA, tetO, and tetQ), one integrase gene intISTBX]1STBZ], 16S rRNA gene, and the microbial community were detected and analyzed. The results showed that the detection rate of 10 resistance genes in the coastal area of the Yangtze River Estuary was 100%. STBX]intI1STBZ] was significantly positively correlated with various ARGs in the water samples. Proteobacteria and Bacteroidota were the dominant bacteria phyla in the water environment of the Yangtze River Estuary. Chloroplast was the main bacteria genus in water, and Chloroplast and Nitrospira were the main bacteria genera in sediment. In water, Nitrospirota was the common potential host of four tetracycline resistance genes (tetX, tetA, tetO, and tetQ). In sediments, Sva0485 was a potential host community shared by STBX]sul1 and intI1STBZ]. The distribution of the microbial community was an important factor affecting the migration and transformation of ARGs in the nearshore area of the Yangtze River Estuary.
Keywords:antibiotics resistance genes(ARGs)|quantitative-polymerase chain reaction(qPCR)|16S amplicon sequencing|nearshore area of the Yangtze River  Estuary|microbial communities
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