Diversity of root associated microorganisms of selected medicinal plants and influence of rhizomicroorganisms on the antimicrobial property of Coriandrum sativum

The total heterotrophic bacteria, actinomycetes and fungus were enumerated from the rhizosphere and non-rhizosphere soil of 50 selected locally available medicinal plants in and around Bharathiar University. In all the plants, population of microorganism were higher in the rhizosphere soil than in the non rhizosphere soil. Among the microorganisms, bacterial population was higher in number followed by fungus and actinomycetes. Of the medicinal plants, the maximum rhizosphere effect was observed in Annona squamosa and the minimum effect was seen in Eclipta alba and Cassia auriculata. Among the bacteria the dominant species was Bacillus followed by Pseudomonas, Enterobacter, Corynebacterium, Micrococcus and Serratia. The Streptomyces species was found to be dominant followed by Deuteromycetes and Frankia among the actinomycetes. Among the fungal isolates Rhizopus was found to be higher in number followed by Aspergillus, Penicillium, Mucor and Fusarium. About 70.96% of the bacterial isolates were found to be nitrate reducers and 90.60% of the bacteria solubilised phosphate. The rhizosphere bacterial isolates were also capable of hydrolyzing starch, cellulose, casein, urea and gelatin. The isolates of bacteria, actinomycetes and fungus were also able to produce phytohormone Indole-3-acetic acid (IAA). The maximum IAA production was recorded by Fusarium sp (5.8 mg/l). The rhizosphere bacterial isolates showed resistance to 14 commercially used antibiotics. In an attempt to check the influence of these plant growth promoting microorganisms on the antimicrobial property of Coriandrum sativum against Escherichia coli MTCC-443 and Aeromonas hydrophila MTCC-646, the results observed was not encouraging since the inoculants did not influence the antibacterial property. However extensive and in depth study is required to find out the influence of rhizomicroorganisms on the antibacterial property of medicinal plants. The other results clearly indicated that the rhizosphere microorganisms could be exploited for its innumerable properties and active metabolites.     

Multiple antibiotic resistance patterns of rhizospheric bacteria isolated from Phragmites australis growing in constructed wetland for distillery effluent treatment

Susceptibility patterns of 12 different antibiotics were investigated against rhizospheric bacteria isolated from Phragmites australis from three different zones i.e. upper (0-5 cm), middle (5-10 cm), lower (10-15 cm) in constructed wetland system with and without distillery effluent. The major pollutants of distillery effluent were phenols, sulphide, heavy metals, and higher levels of biological oxygen demand (BOD), chemical oxygen demand (COD) etc. The antibiotic resistance properties of bacteria were correlated with the heavy metal tolerance (one of distillery pollutant). Twenty-two species from contaminated and seventeen species from non-contaminated site were tested by agar disc-diffusion method. The results revealed that more than 63% of total isolates were resistance towards one or more antibiotics tested from all the three different zones of contaminated sites. The multiple-drug resistance property was shown by total 8 isolates from effluent contaminated region out of which 3 isolates were from upper zone, 3 isolates from middle zone and 2 isolates were from lower zone. Results indicated that isolates from contaminated rhizosphere were found more resistant to antibiotics than isolates from non-contaminated rhizosphere. Further this study produces evidence suggesting that tolerance to antibiotics was acquired by isolates for the adaptation and detoxification of all the pollutants present in the effluent at contaminated site. This consequently facilitated the phytoremediation of effluent, which emerges the tolerance and increases resistance to antibiotics.     

间作栽培对连作马铃薯根际土壤微生物区系的影响

为探究不同间作栽培模式缓解马铃薯（Solanum tuberosum）连作障碍的可行性及作用机制,以马铃薯单作为对照,研究马铃薯间作玉米（Zea mays）、蚕豆（Vicia faba）和荞麦（Fagopyrum esculentum）3种模式对连作马铃薯根际土壤养分含量及微生物区系的影响.结果表明,间作种植模式下马铃薯根际土壤全氮、全磷、速效磷和速效钾含量显著低于马铃薯单作,根际土壤速效磷降幅最大,达45％以上,土壤pH值明显下降.间作栽培模式改变了马铃薯根际土壤微生物群落结构,降低了根际土壤真菌的数量;间作栽培模式对马铃薯根际土壤微生物群落的碳源利用能力也有明显影响,其中马铃薯间作蚕豆和间作玉米处理马铃薯根际土壤微生物培养120 h的平均颜色变化率分别比对照高13.39％和4.30％.马铃薯根际土壤微生物群落总体上对碳水化合物利用率较高,对芳香化合物的利用率较低.间作蚕豆明显促进了马铃薯根际土壤微生物群落的碳源代谢强度,而且能维持较稳定的产量,因而可能是一种有利于改善马铃薯连作栽培根际微生态环境、缓解连作障碍的栽培模式.     

Biodegradation of crude petroleum and petroleum products by fungi isolated from two oil seeds (melon and soybean)

Crude petroleum oil degrading fungi were isolated from two oil seeds, Cucumeropsis mannii (melon) and Glycine max (soybean) seeds in the presence and absence of petroleum fumes. An assessment of the relative ability of each fungus to degrade crude petroleum, diesel and kerosene on minimum salt solution was done using change in optical density read on spectrophotometer. Twenty-one fungal species (14 genera) were isolated altogether during this experiment. These include eight species of Aspergillus; one species each of Botryodiplodia, Bipolaris, Cladosporium, Cunnighamella, Dreschlera, Fusarium, Helminthosporium, Macrophomina, Mucor, Paeciliomyces, Penicillium, Rhizopus and Talariomyces. It was evident that most of the fungi tested were able to biodegrade the crude petroleum oil, though at different rates. Bipolaris had a low rate of biodegradation of the petroleum oil of all the fungal species isolated Botryodiplodia theobromae had the highest degrading ability on the crude oil, while Aspergillus flavus had the least after 40 days of incubation. Aspergillus flavus had the highest ability to biodegrade diesel while A. niger had the least ability. In kerosene, Macrophomina phaseolina had the highest ability while A. niger had the least ability to biodegrade it. There was fluctuation in the growth pattern of the fungi in the petroleum oil medium. The implication of these are discussed.     

外生菌根真菌对油松幼苗根际土壤重金属赋存的影响

油松幼苗接种菌根盆栽试验表明,外生菌根真菌对油松根际土壤重金属铜、镉的赋存形态产生显著影响.与普通根际相比,菌根际土壤中交换态铜、镉含量显著下降,而有机结合态含量则显著增加.菌根际土壤重金属形态呈现出由疏松结合态向紧密结合态转化的趋势.接种菌根显著降低根际重金属的生物有效性,缓解重金属对寄主植物的毒害作用.     

Effect of soil acidification on yield and quality of tea tree in tea plantations from Anxi county,Fujian Province北大核心CSCD

In order to investigate the effect of tea tree rhizosphere soil acidification on yield and quality of tea tree, the pH value, yield, and quality index of fresh tea leaves of different ages were analyzed, and the correlation between rhizosphere soil acidification and ages, yield, and quality index were studied from nine tea plantations in Anxi county, Fujian Province. The results showed that 37.67% of the nine soils were acidified, and 10.03% of them were suitable for planting tea tree. Furthermore, the results indicated that the age of tea tree was significantly and negatively correlated with the soil pH value, as shown by a decrease in soil pH values associated with an increase in tree age. In addition, the yield of spring and fall crops of tea from these nine plantations were all significantly and positively correlated with the pH value, with correlation coefficients distribution values of 0.912-0.952 and 0.898-0.973, respectively. In addition, quality indices, including polyphenols, theanine, and caffeine for the nine tea plantations were all significantly and positively correlated with their soil pH values, and their correlation coefficient distribution values were 0.897-0.959, 0.908-0.974, and 0.907-0.975, respectively. Above all, as tea tree ages increased, rhizosphere soil acidity was significantly increased, and yield and quality of tea presented a statistically significantly up/down trend. © 2018 Science Press. All rights reserved.     

Antifungal activity of volatile metabolites emitted by mycelial cultures of saprophytic fungi

The antifungal activity of molecular identified Chilean saprobiontic fungi, Trichoderma viride, Schizophyllum commune and Trametes versicolor, on the fungal plant pathogens Botrytis cinerea and Fusarium oxysporum, and the saprotrophic mould Mucor miehei was investigated using two types of inhibition bioassay: (1) bi-compartmented Petri dishes and (2) two Erlenmeyer flasks connected by their upper parts. The chemical composition of volatile organic compounds (VOCs) released by saprobiontic fungi was also investigated using headspace solid-phase microextraction (SPME) and gas chromatography/mass spectrometry (GC-MS) analysis. Of the saprobiontic fungi evaluated, one isolate of S. commune showed the highest inhibitory activity against B. cinerea and M. miehei, 86.0±5.4 and 99.5±0.5% respectively. The volatile profiles of fungal isolates were shown to contain a different class of compounds. The major components in the headspace of mycelial cultures were 6-pentyl-α -pyrone (T. viride), ethanol and β -bisabolol (S. commune), and a sesquiterpene alcohol (Tr. versicolor). This is the first study reported on the release of VOCs by Chilean native fungi and their antifungal activity wrt. plant pathogenic fungi.     

废弃铅锌矿区和非矿区小花南芥根际真菌的分离及其铅耐性研究

采用常规、含Cd^2＋和含Pb^2＋马丁氏培养基,对云南省会泽县废弃铅锌矿区和非矿区小花南芥（Arabis alpina Linn）根际真菌进行分离和鉴定,将分离的菌株接种在含不同浓度（0、0．1、1和10mmol L^-1）Pb^2＋的马铃薯葡萄糖培养液中,比较废弃铅锌矿区和非矿区小花南芥根际真菌的铅耐性,结果表明：从废弃铅锌矿区和非矿区小花南芥根际共分离获得11个属的54株真菌。大于1mmolL^-1的Pb^2＋显著抑制铅锌矿区和非矿区小花南芥根际真菌的生长;含Cd^2＋和含Pb^2＋的马丁氏培养基分离的铅锌矿区小花南芥根际真菌Pb^2＋的生长半数抑制浓度（EC50）平均值和最大值均明显大于非矿区,铅锌矿区小花南芥根际真菌对Pb^2＋的耐性强于非矿区。     

Plant secondary chemistry mediates the performance of a nutritional symbiont associated with a tree-killing herbivore

Many herbivores consume microbial food sources in addition to plant tissues for nutrition. Despite the ubiquity of herbivore-microbe feeding associations, few studies examine how host plant phenotypes affect microbial symbionts of herbivores. We tested the hypothesis that chemical polymorphism in a plant population mediates the performance of nutritional microbial symbionts. We surveyed the composition of ponderosa pine resin in northern Arizona, USA, for variation in six monoterpenes, and we approximated four chemical phenotypes. We reared populations of an herbivorous tree-killing beetle (Dendroctonus brevicomis) in ponderosa pine host material, controlling for three monoterpene compositions representing an alpha-pinene to delta-3-carene gradient. Beetles were reared in host material where the dominant monoterpene was alpha-pinene, delta-3-carene, or a phenotype that was intermediate between the two. We isolated nutritional fungal symbionts (Entomocorticium sp. B) from beetle populations reared in each phenotype and performed reciprocal growth experiments in media amended to represent four "average" monoterpene compositions. This allowed us to test the effects of natal host phenotype, chemical polymorphism, and the interaction between natal host phenotype and chemical polymorphism on a nutritional symbiont. Three important findings emerged: (1) fungal isolates grew 25-32% faster when acquired from beetles reared in the intermediate phenotype; (2) the mean growth rate of nutritional fungi varied up to 44% depending on which monoterpene composition media was amended with; and (3) fungal isolates uniformly performed best in the intermediate phenotype regardless of the chemical composition of their natal host. The performance of nutritional fungi related to both the chemical "history" of their associated herbivore and the chemical phenotypes they are exposed to. However, all fungal isolates appeared adapted to a common chemical phenotype. These experiments argue in favor of the hypothesis that chemical polymorphism in plant populations mediates growth of nutritional symbionts of herbivores. Intraspecific chemical polymorphism in plants contributes indirectly to the regulation of herbivore populations, and our experiments demonstrate that the ecological effects of plant secondary chemistry extend beyond the trophic scale of the herbivore-plant interaction.     

Antagonistic and plant growth activity of Trichoderma isolates of Western Himalayas

The genus Trichoderma is rapidly growing colonies bearing tufted or postulate, repeatedly branched conidiophores with lageniform phialides and hyaline or green conidia born in slimy heads. 62 isolates of Trichoderma species were isolated from different rhizospheric soil samples collected from different places located in Western Himalayas region. Out of these only two species were found i.e. Trichoderma hazianum and Trichoderma viride. Their efficacy against soil borne plant pathogens like Sclerotium rolfsii, Rhizoctonia solani and Sclerotinia sclerotiorum revealed that only three isolates amounting to 5% of the total collected isolates of this region were found highly antagonist. Among them 5% isolates were found against S. rolfsii, 13% isolates against R. solani, 10% against sclerotium caused above 80% inhibition of mycelial growth respectively. 6% isolates out of twenty seven utilized chitin by more than 80 and 16% isolates consumed cellulose by above 80% and therefore are producers of chitinase and cellulases. 58% isolates produced colonies having cottony texture and 41% produced dark green colonies. Pigmentation as observed from reverse side of the colony revealed that 70% of them did not produced pigment in the medium. Plant growth promotion measured as root and shoot lengths were significantly higher than in control. The maximum root length and shoot length were recorded when seeds were treated with isolates were recorded at Srinagar Garhwal was 4.70 and 4.75 cm out of all the isolates in which isolate recorded from Srinagar no 3 caused maximum percent seed germination which was significantly higher 79.49%.     

不同栽杉代数根际土壤肥力及生物学特性变化

通过对位于南平溪后安曹下和邓窠２９ａ龄１代、２代、３代实生杉木的根际养分、微生物、酶及生化活性的为期２ａ的研究,结果表明：随杉木连栽代数增加,根际微域土壤酸化趋势增强,有机质和全氮沉积量下降,速效性养分亏缺程度减弱,根际土壤中三大类微生物所占的比例发生一定的变化,真菌和放线菌所占比例增加,细菌所占比例减少,生理类群数量下降,除接触酶活性变化不大外,其它土壤酶和生化活性均有明显下降,体现了杉木多代连栽根际土壤的基本特征;亦是杉木连栽导致地力衰退重要原因之一     

AM真菌对烟草砷吸收及根际pH的影响

采用矿区3种砷(As)含量土壤水提液的琼脂培养基变色试验,研究接种土著(Glomus spp.,Acaulospora spp.)与外源(Glomus caledonium)AM真菌对煳草(Nicotiana tabacum L.)As吸收以及根际pH的影响.结果表明,除无As水平下的烟草对照苗根际pH持续升高外,其它处理的烟草化苗根际pH都有先升高后降低的规律,而且菌根化苗根际pH的降低速度快于对照苗.烟草地上部分As含量在所有处理中没有表现出显著的差异.在无As水平下,烟草地下部分As含量依次为外源菌根化苗>土著菌根化苗>对照苗.在低As、中As、高As水平下,土著菌根化苗的地下部分As含量显著高于外源菌根化苗以及对照苗.可见,接种AM真菌可以降低烟草根际pH,从而影响烟草的As吸收,这也显示了AM真菌应用于烟草安全的可能性.此外,本研究表明土著AM真菌与外源AM真菌对培养基质中的同一As水平有着不同的响应.     

The role of chitin in the decomposition of ectomycorrhizal fungal litter

Ectomycorrhizal fungal tissues comprise a significant forest-litter pool. Ectomycorrhizal (EM) fungi may also influence the decomposition of other forest-litter components via competitive interactions with decomposer fungi and by ensheathing fine roots. Because of these direct and indirect effects of ectomycorrhizal fungi, the factors that control the decomposition of EM fungi will strongly control forest-litter decomposition as a whole and, thus, ecosystem nutrient and carbon cycling. Some have suggested that chitin, a component of fungal cell walls, reduces fungal tissue decomposition because it is relatively recalcitrant. We therefore examined the change in chitin concentrations of EM fungal tissues during decomposition. Our results show that chitin is not recalcitrant relative to other compounds in fungal tissues and that its concentration is positively related to the decomposition of fungal tissues. Variation existing among EM fungal isolates in chitin concentration suggests that EM fungal community structure influences C and nutrient cycling.     

根际微生物耦合降解系统的构建及其对蒽污染土壤的修复

摘要将增强型绿色荧光蛋白(EGFP)标记的黄麻土生根际优势菌Tu-1B分别与葸高效降解菌An-2和生物表面活性剂产生菌P7-50进行原生质体电融合，得到两株具有荧光标记的融合子Tu-An和Tu-P．将二融合子接种于植物根际土壤，构建根际微生物耦合降解系统，：在40d时该系统的最大降解率为96％．对根际土壤中的Tu-An融合子进行了检测，结果表明融合子在根际能稳定旺盛生长．图3表4参18     

Effect of rhizosphere on soil microbial community and pyrene biodegradation

To access the influence of a vegetation on soil microorganisms toward organic pollutant biogegration, this study examined the rhizospheric effects of four plant species (sudan grass, white clover, alfalfa, and fescue) on the soil microbial community and in-situ pyrene (PYR) biodegradation. The results indicated that the spiked PYR levels in soils decreased substantially compared to the control soil without planting. With equal planted densities, the efficiencies of PYR degradation in rhizosphere with sudan grass, white clover, alfalfa and fescue were 34.0%, 28.4%, 27.7%, and 9.9%, respectively. However, on the basis of equal root biomass the efficiencies were in order of white clover >> alfalfa > sudan > fescue. The increased PYR biodegradation was attributed to the enhanced bacterial population and activity induced by plant roots in the rhizosphere. Soil microbial species and biomasses were elucidated in terms of microbial phospholipid ester-linked fatty acid (PLFA) biomarkers. The principal component analysis (PCA) revealed significant changes in PLFA pattern in planted and non-planted soils spiked with PYR. Total PLFAs in planted soils were all higher than those in non-planted soils. PLFA assemblages indicated that bacteria were the primary PYR degrading microorganisms, and that Gram-positive bacteria exhibited higher tolerance to PYR than Gram-negative bacteria did.     

沙田柚根围AM真菌的生境适宜性和季节变化性

以山地长寿沙田柚成年果树为对象,研究不同生境和季节对丛枝菌根(Arbuscular mycorrhiza,AM)真菌侵染以及根围土壤中AM真菌孢子密度的影响.试验结果表明,不同生境下,菌根侵染率和AM真菌孢子密度都是以梯田最高,坡地次之,洼地最低;在坡地和洼地生境下,生草区均高于清耕区.两块试验地AM真菌的菌丝侵染率均为夏季最高(16.8%±1.9%和16.0%±1.8%),秋季次之,冬季最低;丛枝和泡囊的形成也是夏/秋季较高,春/冬季较低;而根围土壤中AM真菌孢子密度则是秋季最高[(159±19)个/100 g和(167±17)个/100 g],夏季次之,冬季最低.总之,对于长寿沙田柚成年果树,AM真菌的菌根侵染率在夏季梯田最高,根围土壤中的AM真菌孢子密度在秋季梯田最高;在坡地和洼地生境中,生草处理均可显著提高菌根侵染率和AM真菌孢子密度.图4参27     

几种固沙植物根际土壤微生物特性研究

研究了红柳、梭梭、沙拐3种固沙植物的根际和根外土壤微生物数量、组成、生理群微生物及土壤养分。结果表明：这3种固沙植物具有较强的根际正效应，其R/S在1.69-75.24之间，以梭梭的根际效应最大，沙拐枣其次，红柳最小，固沙植物的种植显著增加了微生物数量，促进有机质的积累和植物有效养分的转化，有利于流沙的成土发育。表7参9     

Effect of rhizosphere on soil microbial community and in-situ pyrene biodegradation

To access the influence of a vegetation on soil microorganisms toward organic pollutant biogegration, this study examined the rhizospheric effects of four plant species (sudan grass, white clover, alfalfa, and fescue) on the soil microbial community and in-situ pyrene (PYR) biodegradation. The results indicated that the spiked PYR levels in soils decreased substantially compared to the control soil without planting. With equal planted densities, the efficiencies of PYR degradation in rhizosphere with sudan grass, white clover, alfalfa and fescue were 34.0%, 28.4%, 27.7%, and 9.9%, respectively. However, on the basis of equal root biomass the efficiencies were in order of white clover >> alfalfa > sudan > fescue. The increased PYR biodegradation was attributed to the enhanced bacterial population and activity induced by plant roots in the rhizosphere. Soil microbial species and biomasses were elucidated in terms of microbial phospholipid ester-linked fatty acid (PLFA) biomarkers. The principal component analysis (PCA) revealed significant changes in PLFA pattern in planted and non-planted soils spiked with PYR. Total PLFAs in planted soils were all higher than those in non-planted soils. PLFA assemblages indicated that bacteria were the primary PYR degrading microorganisms, and that Gram-positive bacteria exhibited higher tolerance to PYR than Gram-negative bacteria did.     

丛枝菌根对土壤-植物系统中重金属迁移转化的影响

丛枝菌根真菌(arbuscular mycorrhizal fungi, AMF)是一类在自然和农业生态系统中广泛存在并能与多数陆生植物形成共生关系的土壤真菌,在重金属污染土壤中对宿主植物的生长及吸收累积重金属具有重要影响,因而对污染土壤的生物修复具有潜在应用价值。以重金属从根际土壤进入植物并在植物体内再分配过程为主线,介绍丛枝菌根在这一过程中对重金属环境行为,特别是根际土壤中重金属赋存形态及植物吸收重金属的影响。最后,对丛枝菌根影响植物重金属耐性机制研究前沿和菌根修复技术的应用前景进行展望。     

菌根真菌对土壤有机污染物的生物降解

利用土壤真菌和植物的结合体菌根真菌修复土壤,尤其是修复有机污染的根际土壤.正作为一个新的研究方向开始受到广泛关注。菌根真菌作为土壤真菌的一种,与放线菌和细菌等微生物相比,对土壤中有机污染具有更大的忍耐能力.并且能将许多持久性有机污染物(POPs)做为碳源来获取能量。文章通过总结近20年菌根真菌与土壤有机污染物关系的研究,列出了43种能分解POPs的菌根真菌,并探讨了菌根真菌通过直接分解和共代谢的方式降解土壤有机污染物的可能性,为进一步研究菌根真菌生物降解土壤中持久性有机污染物,利用菌根植物生物修复有机污染土壤提供信息。