PIXGRO: A model for simulating the ecosystem CO2 exchange and growth of spring barley

A model, PIXGRO, developed by coupling a canopy flux sub-model (PROXEL_NEE; PROcess-based piXEL Net Ecosystem CO₂ Exchange) to a vegetation structure submodel (CGRO), for simulating both net ecosystem CO₂ exchange (NEE) and growth of spring barley is described. PIXGRO is an extension of the stand-level CO₂ and H₂O-flux model PROXEL_NEE, that simulates the NEE on a process basis, but goes further to include the dry matter production, partitioning, and crop development for spring barley. Dry matter partitioned to the leaf was converted to leaf area index (LAI) using relationships for the specific leaf area (SLA). The canopy flux component, PROXEL_NEE was calibrated using information from the literature on C3 plants and was tested using CO₂ flux data from an eddy-covariance (EC) method in Finland with long-term observations. The growth component (CGRO) was calibrated using data from the literature on spring barley as well as data from the Finland site. It was then validated against field data from two sites in Germany and partly via the use of MODIS remotely sensed LAI from the Finland site.Both the diurnal and the seasonal patterns of gross CO₂ uptake were very well simulated (R² = 0.92). A slight seasonal bias may be attributed to leaf ageing. Crop growth was also well simulated; simulated dry matter agreed with field observed data from Germany (R² = 0.90). For LAI, the agreement between the simulated and observed was good (R² = 0.80), giving an indication that functions describing the conversion of fixed CO₂ to dry matter and the subsequent partitioning leaf dry matter and LAI simulation were robust and provided reliable estimates.The MODIS LAI at a resolution of 1000 m agreed poorly (R² = 0.45) with the PIXGRO simulated LAI and the observed LAI at the Finland site in 2001. We attributed this to the coarse resolution of the image and/or the small size of the barley field (about 17 ha or 0.25 km²) at the Finland site. By deriving a regression relation between the observed LAI and NDVI from a higher resolution MODIS (500 m resolution), the MODIS-recalculated LAI agreed better with the PIXGRO-simulated LAI (R² = 0.86).PIXGRO provides a prototype model bridging the disciplines of plant physiology, crop modeling and remote sensing, for use in a spatial context in evaluating carbon balances and plant growth at stand level, landscape, regional, and with some care, continental scales. Since almost 50% of the European land surface is covered by crops, such a model is needed for the dynamic estimation of LAI and NEE of croplands.     

井冈山森林碳储量与LAI和材积的相关性

建立林木生物量模型是估算森林生物量的重要方法之一,叶面积指数（Leaf Area Index,简称LAI）和材积与林木密切相关,是否可通过建立森林生物量与LAI或材积的相关模型来估算森林生物量,进而估算森林碳储量,值得探索。以井冈山自然保护区两种典型森林类型（常绿阔叶林和人工杉木林）为研究对象,分乔木层、植被层和总体（植被层＋土壤层）3部分分别计算碳密度,并对它们与叶面积指数LAI和材积之间的相关性进行分析。结果表明：常绿阔叶林总体碳密度为38．915kg／m^2,高于人工杉木林的27．460kg／m^2;两种森林类型乔木层和植被层碳密度与材积具有很好的相关性（R^2〉0．97）,在与LAI的相关性分析中,人工杉木林乔木层和植被层碳密度与LAI相关系数达到0．7以上,相关关系显著,而常绿阔叶林各层碳密度与LAI的相关性不明显;在森林总体碳密度与LAI和材积的相关性分析中发现,只有常绿阔叶林总体碳密度与材积的R^2为0．7116,达到显著水平,其它相关性水平均不显著。因此,利用材积与生物量和碳储量的相关关系来推算井冈山森林生物量和碳储量的方法是可行的,通过叶面积指数来推算森林生物量和碳储量的方法还有待进一步研究探讨。     

A method to extract morphological traits of plant organs from 3D point clouds as a database for an architectural plant model

Combining process-based and three-dimensional (3D) structural models for specific crops to functional–structural plant models (FSPMs) enable ecophysiologists to investigate the interaction of single plants or plant stands with their biotic and abiotic environment in a unique way. The present study was part of a collaborative research program on the development of a FSPM for the sample plant (Hordeum vulgare L.). The emphasis of this paper is put on two main aspects. First, improved generic and flexible functions are formulated for modeling the shape of leaves and stems of graminaceous plants as organ-related triangulated surfaces, where the parameters may be directly interpreted in terms of morphological traits. The proposed functions constitute the structural model, which is amplified by topological information to a so-called architectural model. Second, we suggest a new approach to parameterize these functions based on 3D point cloud data obtained by digitization of entire plants. Since no automated technique is available to process 3D point clouds in a way appropriate for parameterization of the architectural model, the required algorithms are developed and implemented in Matlab^®. Our approach comprises the following steps. First, the measured set of points is partitioned into subsets representing each organ. Each subset is then divided further to represent organ segments. Next, the centroid of each partial point cloud representing an organ segment is computed. The sequence of these centroid points describes the organ axis. By means of the architectural model for leaves and stems, triangulated surfaces are assembled from the computed organ axis points and from user-defined initial values for the various parameters in the model (e.g. maximum leaf width). Finally, the parameters in the functions describing leaf and stem surfaces are estimated by fitting computed triangulated surfaces into the related point cloud using least squares optimization. Hence, the proposed method allows the use of 3D point clouds obtained with modern 3D digitizing techniques for the parameterization of an organ-based architectural model.     

Sensitivity of a crop growth simulation model to variation in LAI and canopy nitrogen used for run-time calibration

Run-time calibration, i.e. adjusting simulation results for field observations of model driving variables during run-time, may allow correcting for deviations between complex mechanistic simulation model results and actual field conditions. Leaf area index (LAI) and canopy nitrogen contents (LeafNWt) are the most important driving variables for these models, as they govern light interception and photosynthetic production capacity of the crop. Remote sensing may provide (spatial) data from which such information can be estimated. How, when and at what frequency such additional information is integrated in the simulation process may have various effects on the simulations. The objective of this study was to quantify the effects of different run-time calibration scenarios for final grain yield (FGY) simulations in order to optimize remote sensing image (RS) acquisition. The PlantSys model was calibrated on LAI and LeafNWt for maize in France and used to simulate maize crop growth in the Argentina and the USA, for which non-destructive estimates of LAI and leaf chlorophyll contents were acquired by optical measurement techniques. Leaf chlorophyll data were used to estimate LeafNWt. Due to its structure, the PlantSys model was more susceptible to run-time calibration with LeafNWt than with LAI. Run-time calibration with LAI showed the largest effect on FGY before and around flowering, and could mainly be related to maintenance respiration costs. Run-time calibration with LeafNWt showed the largest effect on FGY at and after flowering and could mainly be related to the change in effective radiation interception due to change in leaf life. The accuracy of LAI estimates showed a major effect on FGY for underestimations but was small in absolute sense. The accuracy of LeafNWt estimates had significant impact at all crop development stages, but was the strongest after flowering where crop growth and nitrogen uptake are less able to recuperate from changes in LeafNWt. In absolute sense, the effect on FGY was as strong as the accuracy of the LeafNWt estimates when applied in the early reproductive stages. Based on these results it was concluded that remotely sensed in-field variability of LAI and LeafNWt is valuable information that can be used to spatially differentiate model simulations. Run-time calibration at sub-field level may lead to more accurate simulation results for whole fields.     

A modelling of the tillering capable of reproducing the fine-scale horizontal heterogeneity of a pure grass sward and its dynamics

The spatial distribution of tillers within a pure grass stand and fluctuation over time result from an interaction between environmental factors and tiller population behaviour. Simulating the latter would provide a tool for ecological analysis.The population behaviour is composed of death, displacement and birth of tillers, the birth coming from clonal processes in perennial grasses. On each tiller, every time a new leaf becomes adult, its axillary bud can grow, according to an evaluation of the environment and of the neighbourhood. If the ratio of red to far-red light is low enough and if the level of available nitrogen is high enough, the bud is put in growth. Otherwise, it becomes dormant. After a gestation period, a new daughter tiller is born close to its mother. Other new tillers can be born farther from an existing tiller, after growth of dormant buds through the old sheaths. Most tillers die at vegetative stage, mainly when they are young and when they are dominated by the canopy.On this basis, an individual-based, discrete events and spatial simulator was built. The space is managed both by indices of cells and by continuous coordinates. Environmental conditions are given by external files. The tillering is mechanistic, according to the positions of the neighbouring tillers and to environmental data. The death is stochastic. Tillers are placed and move according to given rules.The simulator accurately reproduced the fine-scale spatial heterogeneity of the local tiller densities in a pure tall-fescue sward observed eight times throughout 2 years. In spite of necessary improvements, this modelling shows the determining part of plant processes in the observed heterogeneity and in its dynamics.     

Modification of a stream temperature model with Beer's law and application to GaoShan Creek in Taiwan

A physics-based stream temperature model [Tung, C.P., Lee, T.Y., Yang, Y.C., 2006. Modelling climate-change impacts on stream temperature of Formosan Landlocked Salmon habitat. Hydrol. Process. 20, 1629–1649] was improved by incorporating shading effects caused by both cliff terrain and riverbank dense vegetation to simulate hourly stream temperature variations in 1 day. Daily maximal stream temperature is a critical factor to the habit distribution of the Formosan Landlocked Salmon, an important and endangered species. Currently, it only can be found in ChiChiaWan Creek and GaoShan Creek in Taiwan. The former stream temperature model only considers the shading effects of cliff terrain and works well for ChiChiaWan Creek, but overestimates stream temperatures of GaoShan Creek having dense riverbank vegetative covers. The model was modified with the Beer's law and a parameterization scheme to describe the diminishing of the incident solar radiation to take vegetative shading effects into account. Simulation results of GaoShan Creek show the success of this improvement. The shading effects induced by both terrain and vegetation can significantly affect stream temperature distributions. Simulation experiments were conducted to indicate shading effects are varied in different watersheds and seasons.     

Development and test of a crop growth model for application within a Global Change decision support system

When examining potential impacts of Global Change on water resources on the regional scale, spatial and temporal changes in crop water and nitrogen demand are of fundamental significance. State-of-the-art crop growth models are powerful tools to assess the response of crops to altered environmental conditions and cultivation practices. In this paper, the process-based, object-oriented and generic DANUBIA crop growth model is presented. To evaluate the performance of the model, a validation analysis is carried out by comparing modelled data with various field measurements of sugar beet, spring barley, maize, winter wheat and potato crops. Model performance statistics show that crop growth is efficiently simulated. The closest agreement between measured and modelled biomass and leaf area index is achieved for sugar beet and winter wheat. Additionally, the response of the model to changed nitrogen availability caused by cultivation practices is analysed and reveals good results. The results suggest that the model is a suitable tool for numerically assessing the consequences of Global Change on biomass production, water and nitrogen demand, taking into account the complex interplay of water, carbon and nitrogen fluxes in agro-ecosystems.     

Riparian shading and groundwater enhance growth potential for smallmouth bass in Ozark streams.

Moderation of stream temperatures by riparian shading and groundwater are known to promote growth and survival of salmonid fishes, but effects of riparian shade and groundwater on to be growth of warmwater stream fishes are poorly understood or assumed to be negligible. We used stream temperature models to relate shading from riparian vegetation and groundwater inflow to summer water temperatures in Missouri Ozark streams and evaluated effects of summer water temperatures on smallmouth bass, Micropterus dolomieu, growth using a bioenergetics model. Bioenergetics model simulations revealed that adult smallmouth bass in non-spring-fed streams have lower growth potential during summer than fish in spring-fed streams, are subject to mass loss when stream temperatures exceed 27 degrees C, and will likely exhibit greater interannual variation in growth during summer if all growth-influencing factors, other than temperature, are identical between the two stream types. Temperature models indicated that increased riparian shading will expand the longitudinal extent of thermal habitat capable of supporting adult smallmouth bass growth in spring-fed stream reaches when mean daily air temperatures exceed 27 degrees C. Optimum growth temperature (22 degrees C) will be present only in spring-fed streams under these conditions. Potential for increasing shade through riparian restoration is greatest for streams <5 m wide and along north-south reaches of larger streams. However, temperature models also indicated that restoring riparian shading to maximum levels throughout a watershed would increase the total stream mileage capable of supporting positive growth of adult smallmouth bass by only 1-6% when air temperatures are at or near average summer maxima; increases in suitable thermal habitat would be greatest in watersheds with higher spring densities. Riparian management for maintenance or restoration of the thermal habitat of adult smallmouth bass during summer should be focused in areas strongly influenced by groundwater. Restoring riparian shading along spring-fed warmwater streams will likely benefit adult smallmouth bass growth and may ultimately influence population sizes.     

Screening of wheat varieties and associated bacterial population in old alluvial soil of Burdwan, West Bengal

In order to screen out the best variety of wheat (Triticum aestivum) out of eight varieties (viz., HP 1633, BW 11, NW 1014, Sonalika, HUW 468, K 9107, HP 1731 and HUW 234), a field experiment was conducted (from Dec. 2002 to April 2003) in a randomized block design replicated thrice at Crop Research and Seed Multiplication Farm, Burdwan University, West Bengal, India. Various morpho physiological parameters viz., plant population, length of shoot and root, leaf area index (LAI), crop growth rate (CGR), leaf area ratio (LAR), leaf area duration (LAD), net assimilation rate (NAR), yield attributes viz., length of panicles, number of grains per panicle, grain yield, straw yield, pigment content in flag leaf (chlorophyll a, b and total chlorophyll and carotenoid content) were estimated and analyzed statistically Soil bacterial populations were also estimated in the fallow land before sowing of seeds and after harvesting of crop. The HUW 468 variety records higher grain yield, maximum panicle length and maximum chlorophyll b and total chlorophyll content.     

基于MODIS数据的河南省冬小麦产量遥感估算模型

小麦是世界上最重要的粮食作物,小麦生产对中国的粮食保障起着十分重要的作用,及时、准确、大范围对小麦产量进行监测预报,对于农学经济发展和粮食政策制定具有极为重要的现实意义。对作物产量进行遥感监测的原理是建立在其遥感特征基础之上的,通过建立作物长势指标与遥感信息的定量关系,可实现对作物产量的监测预报。文章基于2009年MODIS遥感数据和气象数据,利用Arcgis和ENVI提取纯小麦像元,并提取纯小麦像元对应的NDVI、NPP和LAI,获取分县NDVI、NPP和LAI均值,利用统计软件对产量数据和分县遥感参数均值进行数据整理和分析,建立了河南省冬小麦产量估算模型。以往研究多采用遥感图像上某像元和地面调查点进行研究,具有很大的不确定性,文章以县为单位,对冬小麦平均单产和县域内冬小麦种植像元遥感参数的均值进行相关研究,提高了模型模拟精度。同时文章选用多种遥感参数和多项气象因子建立估产模型,避免了针对一个参数进行估产的局限性。在最佳时相的选择上,根据冯美辰（2010）以往的研究结果,从4月以后,5月8日和4月20Et植被指数和产量相关性最大,4月份之前冬小麦处于返青到拔节期,对产量来说还有很多不确定闪素,因此文章选用5月8El和4月20日进行冬小麦估产研究。结果表明,5月8日的估产模型优于4月20日,加入气象冈子的遥感气象估产模型优于只采用遥感参数进行估产的遥感模型。利用2010年产量数据对模型精度进行检验,遥感气象模型预测精度在70．2％N99．7％之间,平均精度为90．7％;遥感模型预测精度在68．1％到95．5％之间,平均精度为83．9％。表明遥感气象模型模拟精度更高,其精度可以满足大面积估产要求,可以对产量预报提供科学参考。     

A dynamic host selection model for mountain pine beetle,Dendroctonus ponderosae Hopkins

The link between individual habitat selection decisions (i.e., mechanism) and the resulting population distributions of dispersing organisms (i.e., outcome) has been little-studied in behavioural ecology. Here we consider density-dependent habitat (i.e., host) selection for an energy- and time-limited forager: the mountain pine beetle (Dendroctonus ponderosae Hopkins). We present a dynamic state variable model of individual beetle host selection behaviour, based on an individual’s energy state. Field data are incorporated into model parameterization which allows us to determine the effects of host availability (with respect to host size, quality, and vigour) on individuals’ decisions. Beetles choose larger trees with thicker phloem across a larger proportion of the state-space than smaller trees with thinner phloem, but accept lower quality trees more readily at low energy- and time-states. In addition, beetles make habitat selection decisions based on host availability, conspecific attack densities, and beetle distributions within a forest stand. This model provides a framework for the development of a spatial game model to examine the implications of these results for attack dynamics of beetle populations.     

Water budget and the consequent duration of canopy carbon gain in a teak plantation in a dry tropical region: Analysis using a soil–plant–air continuum multilayer model

A soil–plant–air continuum multilayer model was used to numerically simulate canopy net assimilation (A_n), evapotranspiration (ET), and soil moisture in a deciduous teak plantation in a dry tropical climate of northern Thailand to examine the influence of soil drought on A_n. The timings of leaf flush and the end of the canopy duration period (CDP) were also investigated from the perspective of the temporal positive carbon gain. Two numerical experiments with different seasonal patterns of leaf area index (LAI) were carried out using above-canopy hydrometeorological data as input data. The first experiment involved seasonally varying LAI estimated based on time-series of radiative transmittance through the canopy, and the second experiment applied an annually constant LAI. The first simulation captured the measured seasonal changes in soil surface moisture; the simulated transpiration agreed with seasonal changes in heat pulse velocity, corresponding to the water use of individual trees, and the simulated A_n became slightly negative. However, in the second simulation, A_n became negative in the dry season because the decline in stomatal conductance due to severe soil drought limited the assimilation, and the simultaneous increase in leaf temperature increased dark respiration. Thus, these experiments revealed that the leaflessness in the dry season is reasonable for carbon gain and emphasized the unfavorable soil water status for carbon gain in the dry season. Examining the duration of positive A_n (DPA) in the second simulation showed that the start of the longest DPA (LDPA) in a year approached the timing of leaf flush in the teak plantation after the spring equinox. On the other hand, the end appeared earlier than that of all CDPs. This result is consistent with the sap flow stopping earlier than the complete leaf fall, implying that the carbon assimilation period ends before the completion of defoliation. The model sensitivity analysis in the second simulation suggests that a smaller LAI and slower maximum rate of carboxylation likely extend the LDPA because soil water from the surface to rooting depth is maintained longer at levels adequate for carbon gain by decreased canopy transpiration. The experiments also suggest that lower soil hydraulic conductivity and deeper rooting depth can postpone the end of the LDPA by increasing soil water retention and the soil water capacity, respectively.     

A hierarchical analysis of terrestrial ecosystem model Biome-BGC: Equilibrium analysis and model calibration

The increasing complexity of ecosystem models represents a major difficulty in tuning model parameters and analyzing simulated results. To address this problem, this study develops a hierarchical scheme that simplifies the Biome-BGC model into three functionally cascaded tiers and analyzes them sequentially. The first-tier model focuses on leaf-level ecophysiological processes; it simulates evapotranspiration and photosynthesis with prescribed leaf area index (LAI). The restriction on LAI is then lifted in the following two model tiers, which analyze how carbon and nitrogen is cycled at the whole-plant level (the second tier) and in all litter/soil pools (the third tier) to dynamically support the prescribed canopy. In particular, this study analyzes the steady state of these two model tiers by a set of equilibrium equations that are derived from Biome-BGC algorithms and are based on the principle of mass balance. Instead of spinning-up the model for thousands of climate years, these equations are able to estimate carbon/nitrogen stocks and fluxes of the target (steady-state) ecosystem directly from the results obtained by the first-tier model. The model hierarchy is examined with model experiments at four AmeriFlux sites. The results indicate that the proposed scheme can effectively calibrate Biome-BGC to simulate observed fluxes of evapotranspiration and photosynthesis; and the carbon/nitrogen stocks estimated by the equilibrium analysis approach are highly consistent with the results of model simulations. Therefore, the scheme developed in this study may serve as a practical guide to calibrate/analyze Biome-BGC; it also provides an efficient way to solve the problem of model spin-up, especially for applications over large regions. The same methodology may help analyze other similar ecosystem models as well.     

Modeling the effect of photosynthetic vegetation properties on the NDVI--LAI relationship

Developing a relationship between the normalized difference vegetation index (NDVI) and the leaf area index (LAI) is essential to describe the pattern of spatial or temporal variation in LAI that controls carbon, water, and energy exchange in many ecosystem process models. Photosynthetic vegetation (PV) properties can affect the estimation of LAI, but no models integrate the effects of multiple species. We developed four alternative NDVI-LAI models, three of which integrate PV effects: no PV effects, leaf-level effects, canopy-level effects, and effects at both levels. The models were fit to data across the natural range of variation in NDVI for a widespread High Arctic ecosystem. The weight of evidence supported the canopy-level model (Akaike weight, wr = 0.98), which includes species-specific canopy coefficients that primarily scale fractional PV cover to LAI by accounting for the area of unexposed PV. Modeling the canopy-level effects improved prediction of LAI (R2 = 0.82) over the model with no PV effect (R2 = 0.71) across the natural range of variation in NDVI but did not affect the site-level estimate of LAI. Satellite-based methods to estimate species composition, a variable in the model, will need to be developed. We expect that including the effects of PV properties in NDVI-LAI models will improve prediction of LAI where species composition varies across space or changes over time.     

MODIS植被叶面积指数对贵州高原山地气象条件的响应

用EOS/MODIS卫星遥感分辨率为1 km的贵州2001—2008年每8 d合成植被叶面积指数（LAI）,分析了LAI的时间变化规律和年、季空间分布特征;还用贵州69个气象站的日观测数据,分别与各气象点所对应的3×3个像元LAI平均值进行气象要素（温度、降水、日照时数和水汽压）与LAI的相关分析。结果表明：该地区LAI年变化为0.3~3.0,多年平均LAI的空间分布是东南部最高（4.0）,西部和西南部最低（1.0）。显著影响LAI变化的气象因子按相关系数的大小排列是：温度、水汽压、日照时数和降水（均通过了99.9%信度检验）。水汽压对LAI产生影响的原因可能与高原喀斯特地区土壤层较薄有关。在考虑云贵高原植被年际间变化对气候变化的响应时可以把这些要素作为重要的影响因子。     

Modeling cotton (Gossypium spp.) leaves and canopy using computer aided geometric design (CAGD)

The research presented here develops a geometrically accurate model of cotton crop canopies that can be used to explore changes in canopy microenvironment and physiological function with leaf structure. We develop an accurate representation of the leaves, including changes in three-dimensional folding and orientation with age and cultivar. Photogrammetrical analysis of leaf surfaces is used to generate measured points at known positions. Interpolation of points located on the surface of the cotton leaves is then performed with a tensor product interpolants model that generates a generic leaf shape. Dynamic changes in leaf shape and canopy position over the growing season are based on measurements of cotton canopies in the field, and are used to modulate the generic leaf shape. The simulated leaves populate a canopy element based on statistical distributions from measured crop canopies. The simulation is found to give a good representation of cotton canopy leaves, adequately capturing the three-dimensional structure of the leaves and changes in leaf shape and size over the growing season. The simulated canopy accurately estimates leaf area index, except for the earliest measurement period prior to canopy closure. The application of the CAGD algorithm for representing cotton leaf and canopy geometry, and the technique for changing the leaves’ spatial position, size and shape through time of four representative cotton canopies is found to be a useful tool for developing a realistic crop canopy. We use leaf area index (LAI) as a measure of the accuracy of model-predicted LAI values in comparison to LAI in crop canopies in situ, obtaining r² values ranging from 0.82 to 0.92. The level of detail captured in the model could contribute greatly to future studies of physiological function and biophysical dynamics within a crop canopy.     

A simplified approach to implement forest eco-hydrological properties in regional hydrological modelling

The topic of this paper is a simplified model for simulating the hydrological properties of forest stands based on a robust computation of the temporal LAI (leaf area index) dynamics. The approach allows the simulation of all hydrologically relevant processes. It includes interception of precipitation and transpiration of forest stands with and without groundwater in the rooting zone. The model also considers phenology, mortality and simple management practice. It was implemented as a module in the eco-hydrological model SWIM (Soil and Water Integrated Model). The approach was tested on Scots pine (Pinus sylvestris) and common oak (Quercus robur and Q. petraea).The results demonstrate a good simulation of annual biomass increase and LAI and satisfactory simulation of litter production (annual mean value). A comparison of the date of May sprout for Scots pine and leaf unfolding for Oak (1980–1990) with observed data of the DWD (German Weather Service) shows a good reproduction of the temporal dynamic. The daily simulation of transpiration shows an excellent correlation of r = 0.81 for the year 1998 but only r = 0.65 for 1999. The interception losses were also simulated and compared with weekly observed data showing satisfactory results in the vegetation periods and annual sums, but worse agreement in autumn and spring time. A regional assessment study was done in the federal state of Brandenburg (Germany) to test the applicability and multi-criteria evaluation capabilities of the approach on the landscape and catchments scale using forest data, daily river discharge and regional water balance.     

Leaf-area index and light attenuation in rapidly expanding shrub thickets

There is increasing interest in the changes in ecosystem services that accompany the conversion of grasslands to shrub-dominated communities. Shrub structure and associated effects on the light environment may be especially important in affecting productivity and diversity. Leaf-area index (LAI) and understory light levels of Morella cerifera shrub thickets were assessed on Hog Island, Virginia, USA, at four sites along a soil chronosequence. LAI was estimated from annual leaf litter, with allometric models relating stem diameter to leaf area, with a portable integrating radiometer (LI-COR LAI-2000), and from photosynthetically active radiation (PAR) using the Beer-Lambert law. For the two youngest thickets, LAI estimates from leaf litter (approximately 10.0) approached levels often associated with tropical rain forest. Allometric models estimated LAI values at 9.8 and 12.5 for the same thickets. High LAI in thickets also results in high light attenuation. Light levels within thickets were as low as 0.7% of above-canopy PAR in the youngest thicket. These data suggest that M. cerifera shrub thickets have a very high potential for annual net primary production. Furthermore, extreme modification of the light environment, coupled with heavy shrub litter fall, may exclude potential competitors during thicket establishment and rapidly alter community structure and ecosystem function.     

Testing a new model of aphid abundance with sedentary and non-sedentary predators

Aphid population dynamics has been thoroughly investigated, especially in tree-dwelling aphids. Among the controls of the aphid rate of increase are the negative effects of antagonists, the positive effects of mutualists, the density-dependence of the aphid dynamics, and the non-stationary quality of plant tissues. Here we present a mechanistic model of aphid growth that considers most of these governing factors using a simple formulation. What is new in this model is that it considers two kinds of antagonists. The first kind is a guild of aphid predator specialists that includes ladybirds (Coleoptera: Coccinellidae), but also species of some families of Hemiptera, Diptera, and Neuroptera. The second kind of antagonists consists of omnivores or generalist predators and in this particular setting is exemplified by the European earwig Forficula auricularia (Dermaptera: Forficulidae). The model developed here compared the effects of these two different kinds of aphid predators, the second one always at the site (sedentary predators) and the first one that arrives in important numbers only once the aphid population has already developed to some degree (non-sedentary predators). Multiple model parameter sets, representing different hypotheses about controls on aphid populations, were evaluated within the Generalised Likelihood Uncertainty Estimation (GLUE) methodology. The model correctly reproduced the experimental data obtained in an organic citrus grove showing the important effect that sedentary predators as earwigs can have on the aphid populations. Low densities of sedentary predators or even low predation rates can have a disproportionate effect on the final aphid density, as they prey on small populations, when the per capita effect on the aphid population is higher. During the main spring peak of aphids the role of non-sedentary predators is secondary, as they track the aphid density rather than control it. However, these non-sedentary predators are important within the proposed model to keep the second autumn peak of aphids at low values.     

Influences of canopy structure and physiological traits on flux partitioning between understory and overstory in an eastern Siberian boreal larch forest

Boreal forests play an important role in the global balance of energy and CO₂. Our previous study of elaborate eddy covariance observations in a Siberian boreal larch forest, conducted both above the forest canopy and at the forest floor, revealed a significant contribution of latent heat flux (LE) from the cowberry understory to the whole ecosystem LE. Thus, in the present study, we examined what factors control the partitioning of whole ecosystem LE and CO₂ flux into the understory and overstory vegetation, using detailed leaf-level physiology (for both understory and overstory vegetation) and soil respiration property measurements as well as a multilayer soil-vegetation-atmosphere transfer (SVAT) model. The modeling results showed that the larch overstory's leaf area index (LAI) and vertical profile of leaf photosynthetic capacity were major factors determining the flux partitioning in this boreal forest ecosystem. This is unlike other forest ecosystems that tend to have dense LAI. We concluded that control of the larch overstory's LAI had a relationship with both the coexistence of the larch with the cowberry understory and with the water resources available to the total forest ecosystem.