Relation of fish and shellfish distributions to habitat and water quality in the Mobile Bay estuary, USA

The Mobile Bay estuary in the northern Gulf of Mexico provides a rich habitat for many fish and shellfish, including those identified as economically and ecologically important. The National Estuary Program in Mobile Bay has focused on restoration of degraded estuarine habitat on which these species depend. To support this effort, we used statistical techniques of ordination, cluster analysis, and discriminant analysis to relate distributions of individual fish and shellfish species and species assemblages to two dozen water quality and habitat variables in a geo-referenced database. Species appeared to respond to dominant gradients of low to high salinity and upland to offshore habitat area; many of the 15 communities identified via cluster analysis showed aggregated spatial distributions that could be related to habitat characteristics. Species in the Mobile River Delta were distinct from those in other areas of the estuary. This analysis supports habitat management in the Mobile Bay estuary; however, due to mobility of organisms among sampling locations and the dynamic environmental conditions in estuaries, we conclude that the analyses presented here are most appropriate for an evaluation of the estuary as a whole.     

Estuarine mixing behavior of colloidal organic carbon and colloidal mercury in Galveston Bay, Texas

Mercury (Hg) in estuarine water is distributed among different physical phases (i.e. particulate, colloidal, and truly dissolved). This phase speciation influences the fate and cycling of Hg in estuarine systems. However, limited information exists on the estuarine distribution of colloidal phase Hg, mainly due to the technical difficulties involved in measuring it. In the present study, we determined Hg and organic carbon levels from unfiltered, filtered (<0.45 μm), colloidal (10 kDa-0.45 μm), and truly dissolved (<10 kDa) fractions of Galveston Bay surface water in order to understand the estuarine mixing behavior of Hg species as well as interactions of Hg with colloidal organic matter. For the riverine end-member, the colloidal fraction comprised 43 ± 11% of the total dissolved Hg pool and decreased to 17 ± 8% in brackish water. In the estuarine mixing zone, dissolved Hg and colloidal organic carbon showed non-conservative removal behavior, particularly in the low salinity (<15 ppt) region. This removal may be caused by salt-induced coagulation of colloidal matter and consequent removal of dissolved Hg. The particle-water interaction, K(d) ([particulate Hg (mol kg(-1))]/[dissolved Hg (mol L(-1))]) of Hg decreased as particle concentration increased, while the particle-water partition coefficient based on colloidal Hg and the truly dissolved Hg fraction, K(c) ([colloidal Hg (mol kg(-1))]/[truly dissolved Hg (mol L(-1))]) of Hg remained constant as particle concentration increased. This suggests that the particle concentration effect is associated with the amount of colloidal Hg, increasing in proportion to the amount of suspended particulate matter. This work demonstrates that, colloidal organic matter plays an important role in the transport, particle-water partitioning, and removal of dissolved Hg in estuarine waters.     

Using Geographically Isolated Loading Scenarios to Analyze Nitrogen and Phosphorus Exchanges and Explore Tailored Nutrient Control Strategies for Efficient Management

A set of geographically isolated differential nitrogen (N) and phosphorus (P) load model scenarios from major Chesapeake basins provides information on the relative impact of nutrient loads on primary production and dissolved oxygen in the Chesapeake Bay. Model results show the relationships of deep water dissolved oxygen with nutrient limitation-related algal blooms, organic carbon loads from the watershed, estuarine circulation, nutrient cycling, and nutrient diagenesis. The combined effect of changes in load from multiple basins is additive for changes in both chlorophyll-a and deep water dissolved oxygen concentrations. Management of both N and P are required in the Chesapeake watershed and tidal waters to achieve water quality standards, but overall efficiencies could be gained with strategies that place greater emphasis on P control in the upper Bay and greater emphasis on N control in the lower Bay. The areas of the Bay with the highest degree of dissolved oxygen degradation that generally drive management decisions are mostly P-limited and are significantly influenced by the load from the upper Bay’s basins. Reducing P from the upper Bay’s basins will intensify P limitation and would allow an increase in N of about six times the weight of P reduction. Combining the relative nutrient reduction effectiveness with the relative control cost information could improve management efficiency and provide benefits at a lower cost. This article describes initial steps that can be taken to examine the benefits from N-P exchanges.     

Application of the benthic index of biotic integrity to environmental monitoring in Chesapeake Bay

The Chesapeake Bay benthic index of biotic integrity (B-IBI) was developed to assess benthic community health and environmental quality in Chesapeake Bay. The B-IBI provides Chesapeake Bay monitoring programs with a uniform tool with which to characterize bay-wide benthic community condition and assess the health of the Bay. A probability-based design permits unbiased annual estimates of areal degradation within the Chesapeake Bay and its tributaries with quantifiable precision. However, of greatest interest to managers is the identification of problem areas most in need of restoration. Here we apply the B-IBI to benthic data collected in the Bay since 1994 to assess benthic community degradation by Chesapeake Bay Program segment and water depth. We used a new B-IBI classification system that improves the reliability of the estimates of degradation. Estimates were produced for 67 Chesapeake Bay Program segments. Greatest degradation was found in areas that are known to experience hypoxia or show toxic contamination, such as the mesohaline portion of the Potomac River, the Patapsco River, and the Maryland mainstem. Logistic regression models revealed increased probability of degraded benthos with depth for the lower Potomac River, Patapsco River, Nanticoke River, lower York River, and the Maryland mainstem. Our assessment of degradation by segment and water depth provided greater resolution of relative condition than previously available, and helped define the extent of degradation in Chesapeake Bay.     

Characterization of microbial communities from coastal waters using microarrays

Molecular methods, including DNA probes, were used to identify and enumerate pathogenic Vibrio species in the Chesapeake Bay; our data indicated that Vibrio vulnificus exhibits seasonal fluctuations in number. Our work included a characterization of total microbial communities from the Bay; development of microarrays that identify and quantify the diversity of those communities; and observation of temporal changes in those communities. To identify members of the microbial community, we amplified the 16S rDNA gene from community DNA isolated from a biofilm sample collected from the Chesapeake Bay in February, 2000. The resultant 75 sequences were 95% or more similar to 7 species including two recently described Shewanella species, baltica and frigidimarina, that have not been previously isolated from the Chesapeake. When the genera of bacteria from biofilm after culturing are compared to those detected by subcloning amplified 16S fragments from community DNA, the cultured sample exhibited a strong bias. In oysters collected in February, the most common bacteria were previously unknown. Based on our 16S findings, we are developing microarrays to detect these and other microbial species in these estuarine communities. The microarrays will detect each species using four distinct loci, with the multiple loci serving as an internal control. The accuracy of the microarray will be measured using sentinel species such as Aeromonas species, Escherichia coli, and Vibrio vulnificus. Using microarrays, it should be possible to determine the annual fluctuations of bacterial species (culturable and non-culturable, pathogenic and non-pathogenic). The data may be applied to understanding patterns of environmental change; assessing the health of the Bay; and evaluating the risk of human illness associated with exposure to and ingestion of water and shellfish.     

Distribution coefficients (K d) of stable iodine in estuarine and coastal regions, Japan, and their relationship to salinity and organic carbon in sediments

The sediment–water distribution coefficient, K _d, is one of the most important parameters in radionuclide assessment models. In this study, we determined K _ds of stable iodine (I) in estuarine and coastal regions. We studied 16 estuarine and coastal regions of Japan and obtained I data on water and sediments. Data on salinity, pH, dissolved organic carbon and dissolved oxygen in water, and organic carbon (OC) in sediments were also obtained as estuarine variables. Determined K _ds of I in the Sagami River estuary decreased along the salinity gradient (salinity range, 0.1–33.8), indicating that salinity is one of the important factors controlling the K _d values; however, when the K _d values were compared among all the estuaries, the difference between minimum and maximum K _d values varied by about two orders of magnitude in a narrow salinity range of 30.0–34.4. A significant correlation between K _d value and OC content in sediments was observed in all the stations with a salinity of ≥30 except for stations in the Ishikari and Onga River estuaries. The exceptions are probably due to different sources of the sediments, which are explained by the results of relatively low I/OC ratios in sediments in those two estuaries, compared to the other estuaries. Thus, OC in sediments as well as salinity may be responsible for the variation of K _ds of I in the estuarine and coastal regions.     

Sensitive monitoring of iodine species in sea water using capillary electrophoresis: vertical profiles of dissolved iodine in the Pacific Ocean

Using a novel high-sensitivity capillary electrophoretic method, vertical distributions of iodate, iodide, total inorganic iodine, dissolved organic iodine and total iodine in the North Pacific Ocean (0-5500 m) were determined without any sample pre-treatment other than UV irradiation before total iodine analysis. An extensive set of data demonstrated that the iodine behaviour in the ocean water collected during a cruise in the North Pacific Ocean in February-March 2003 was not conservative but correlated with variations in concentrations of dissolved oxygen and nutrient elements such as silicon, nitrogen and phosphorus. This suggests that the vertical distribution of iodine is associated with biological activities. The dissolved organic iodine was found in the euphotic zone in accord with observations elsewhere in the oceans. The vertical profile of dissolved organic iodine also appears to be related to biogeochemical activity. The concentrations of all measured iodine species vary noticeably above 1000 m but only minor latitudinal changes occur below 1000 m and slight vertical alterations can be observed below 2400 m. These findings are thought to reflect the stratification of nutrients and iodine species with different biological activities in the water column.     

An assessment of water quality and primary productivity in Perdido Bay,a Northern Gulf of Mexico Estuary

Perdido Bay is a shallow estuarine system of approximately 130 km² with three major freshwater inputs. On a seasonal basis the productivity and chlorophyll a concentration of phytoplankton in Perdido Bay are controlled by temperature. One input, Eleven Mile Creek, is influenced by a paper mill discharge. Eleven Mile Creek exhibits high levels of light attenuation, high concentrations of dissolved nutrients, and low rates of carbon fixation that are significantly different from the other inputs or areas of Perdido Bay and productivity in Eleven Mile Creek is light limited. Upper Perdido Bay had slightly elevated concentrations of dissolved nutrients which correlate with significantly higher rates of carbon fixation and phytoplankton biomass. Nutrients and color from Eleven Mile Creck are diluted by the Perdido River inflow, restricting nutrient and light limitations to the area at the mouth of Eleven Mile Creek.     

State of the Estuaries in the Mid-Atlantic Region of the United States

The U.S. EPA has prepared a State of the Region Report for Mid-Atlantic Estuaries to increase knowledge of environmental condition for improved environmental management. Sources of information included the National Estuary Programs, the Chesapeake Bay Program, the state monitoring programs in Delaware, Maryland, and Virginia, Federal programs such as National Status & Trends, National Shellfish Register, National Wetlands Inventory, the Environmental Monitoring and Assessment Program, and other primary literature sources. The state of the estuarine environment was summarized using indicators for water and sediment quality, habitat change, condition of living resources, and aesthetic quality. Each indicator was briefly discussed relative to its importance in understanding estuarine condition. Wherever possible, data from multiple programs were used to depict condition. Finally, an overall evaluation of estuarine condition in the region was determined. The usefulness of monitoring programs that collect consistent information with a well-defined sampling design cannot be overemphasized.     

Assessment and significance of phytoplankton species composition within Chesapeake Bay and Virginia tributaries through a long-term monitoring program

Phytoplankton and water quality long term trends are presented from a 20-year monitoring program of Chesapeake Bay and several of its major tributaries. Increasing phytoplankton biomass and abundance are ongoing within this estuarine complex, with diatoms the dominant component, along with chlorophytes and cyanobacteria as sub-dominant contributors in the tidal freshwater and oligohaline regions. Diatoms, dinoflagellates, and cryptomonads are among the major flora downstream in the tributaries and within the Chesapeake Bay. Water quality conditions within the three tributaries have remained rather stable over this time period; while there are long term trends of reduced nutrients, increasing bottom oxygen, and decreasing water clarity for the lower Chesapeake Bay. Of note is an increasing trend of cyanobacteria biomass at 12 of the 13 stations monitored at tributary and Chesapeake Bay stations, plus the presence of 37 potentially harmful taxa reported for these waters. However, the overall status of the phytoplankton populations is presently favorable, in that it is mainly represented and dominated by taxa suitable as a major food and oxygen source within this ecosystem. Although potentially harmful taxa are present, they have not at this time exerted profound impact to the region, or replaced the diatom populations in overall dominance.     

Spatial scales and probability based sampling in determining levels of benthic community degradation in the Chesapeake Bay

The extent of degradation of benthic communities of the Chesapeake Bay was determined by applying a previously developed benthic index of biotic integrity at three spatial scales. Allocation of sampling was probability-based allowing areal estimates of degradation with known confidence intervals. The three spatial scales were: (1) the tidal Chesapeake Bay; (2) the Elizabeth River watershed; and (3) two small tidal creeks within the Southern Branch of the Elizabeth River that are part of a sediment contaminant remediation effort. The areas covered varied from 10^–1 to 10⁴ km² and all were sampled in 1999. The Chesapeake Bay was divided into ten strata, the Elizabeth River into five strata and each of the two tidal creeks was a single stratum. The determination of the number and size of strata was based upon consideration of both managerially useful units for restoration and limitations of funding. Within each stratum 25 random locations were sampled for benthic community condition. In 1999 the percent of the benthos with poor benthic community condition for the entire Chesapeake Bay was 47% and varied from 20% at the mouth of the Bay to 72% in the Potomac River. The estimated area of benthos with poor benthic community condition for the Elizabeth River was 64% and varied from 52–92%. Both small tidal creeks had estimates of 76% of poor benthic community condition. These kinds of estimates allow environmental managers to better direct restoration efforts and evaluate progress towards restoration. Patterns of benthic community condition at smaller spatial scales may not be correctly inferred from larger spatial scales. Comparisons of patterns in benthic community condition across spatial scales, and between combinations of strata, must be cautiously interpreted.     

An approach for identifying the causes of benthic degradation in Chesapeake Bay

We developed an index to differentiate between low dissolved oxygen effects and sediment contamination effects for sites classified as degraded by the Chesapeake Bay Benthic Index of Biotic Integrity (B-IBI), using discriminant analysis. We tested 126 metrics for differences between sites with low dissolved oxygen and sites with contaminated sediments. A total of 16 benthic community metrics met the variable selection criteria and were used to develop a discriminant function that classified degraded sites into one of two stress groups. The resulting discriminant function correctly classified 77% of the low dissolved oxygen sites and 80% of the contaminated sites in the validation data.     

河口混合区划定及营养盐标准限值构建

河口是河流和海洋生态系统的过渡带,目前中国缺乏河口区划界和水质评价标准,河口区及其附近海域环境质量评价直接使用《海水水质标准》(GB 3097—1997)对标评价的方式,评价结果往往与实际不符,对河口地区开发建设和管理保护不利。笔者系统分析了中国河口区划分及水质评价的现状和存在问题,以北部湾主要入海河口钦州湾为例比较了河口区营养盐背景值与海洋营养盐背景值,两者差异显著,认为使用《海水水质标准》(GB 3097—1997)对河口区进行评价不能很好地反映环境质量。因此依据现行的《地表水环境质量标准》(GB 3838—2002)、《海水水质标准》(GB 3097—1997)和《近岸海域环境功能区管理办法》,提出使用盐度等数据探讨河口混合区划定及建立河口混合区水质营养盐标准限值的方法。在钦州湾的应用案例中,河口混合区的划定和河口区营养盐标准限值确定,都具有科学性和可操作性。使用河口混合区营养盐标准进行评价的结果比直接使用《海水水质标准》(GB 3097—1997)评价能更准确地反映环境质量,可为河口区划界及水质评价提供方法参考。     

Impacts of pesticides in a Central California estuary

Recent and past studies have documented the prevalence of pyrethroid and organophosphate pesticides in urban and agricultural watersheds in California. While toxic concentrations of these pesticides have been found in freshwater systems, there has been little research into their impacts in marine receiving waters. Our study investigated pesticide impacts in the Santa Maria River estuary, which provides critical habitat to numerous aquatic, terrestrial, and avian species on the central California coast. Runoff from irrigated agriculture constitutes a significant portion of Santa Maria River flow during most of the year, and a number of studies have documented pesticide occurrence and biological impacts in this watershed. Our study extended into the Santa Maria watershed coastal zone and measured pesticide concentrations throughout the estuary, including the water column and sediments. Biological effects were measured at the organism and community levels. Results of this study suggest the Santa Maria River estuary is impacted by current-use pesticides. The majority of water samples were highly toxic to invertebrates (Ceriodaphnia dubia and Hyalella azteca), and chemistry evidence suggests toxicity was associated with the organophosphate pesticide chlorpyrifos, pyrethroid pesticides, or mixtures of both classes of pesticides. A high percentage of sediment samples were also toxic in this estuary, and sediment toxicity occurred when mixtures of chlorpyrifos and pyrethroid pesticides exceeded established toxicity thresholds. Based on a Relative Benthic Index, Santa Maria estuary stations where benthic macroinvertebrate communities were assessed were degraded. Impacts in the Santa Maria River estuary were likely due to the proximity of this system to Orcutt Creek, the tributary which accounts for most of the flow to the lower Santa Maria River. Water and sediment samples from Orcutt Creek were highly toxic to invertebrates due to mixtures of the same pesticides measured in the estuary. This study suggests that the same pyrethroid and organophosphate pesticides that have been shown to cause water and sediment toxicity in urban and agriculture water bodies throughout California, have the potential to affect estuarine habitats. The results establish baseline data in the Santa Maria River estuary to allow evaluation of ecosystem improvement as management initiatives to reduce pesticide runoff are implemented in this watershed.     

The burrowing crab Neohelice granulata as potential bioindicator of heavy metals in estuarine systems of the Atlantic coast of Argentina

This paper presents the concentrations of total copper, lead, cadmium, and zinc in hepatopancreas of the burrowing crab Neohelice granulata from the Samboromb??n Bay (La Plata River estuary) and the Mar Chiquita coastal lagoon, Argentina. The highest accumulation of lead was observed in Mar Chiquita samples, whereas copper, zinc, and cadmium concentrations were higher in those from Samboromb??n Bay. Marked temporal and geographic availability differences were observed, while sexual differences only were observed for zinc. Finally, the validity of using this species as bioindicator of heavy-metal pollution within the assessed estuarine ecosystems is discussed.     

Assessing the Effects of Natural and Anthropogenic Stressors in the Potomac Estuary: Implications for Long-Term Monitoring

Ecological conditions in the Potomac Estuary are affected by a variety of natural and anthropogenic stressors. Natural climatic factors combined with anthropogenic activities affect fluxes of material through Potomac River watersheds and cause changes in ecological conditions in the Potomac Estuary. A basic premise of this ongoing study is that effects of anthropogenic and natural stressors can be distinguished. The investigation involves: 1) analysis of existing data using time series methods, 2) retrospective modeling to link the response of estuarine water quality to changes in stressors, and 3) new measurements on sediment cores from the Potomac Estuary. Estuarine effects being considered include changes in the distribution and abundance of chlorophyll a, diatoms, dinoflagellates, ostracods, submerged aquatic vegetation, benthic fauna, dissolved oxygen, and foraminifera. Since current conditions may be due to the accumulation of effects over many years, our research considers variability and changes during the past century in the context of long-term changes during the past 500 years. The availability of large data sets from the past century, long-term information on variability in precipitation from tree ring data from the past 300 years, and paleoecological studies by other investigators in the Potomac Estuary and main stem of Chesapeake Bay make the Potomac Estuary an ideal place to develop methods to distinguish between effects of natural and anthropogenic stressors in estuaries, in the context of a varying, and perhaps changing, climate.     

Comprehensive analysis of an ecological risk assessment of the Daliao River estuary, China

At present, most estuarine ecological risk studies are based on terrestrial ecosystem models, which ignore spatial heterogeneity. The Daliao River estuary has representative characteristics of many estuaries in China, and we used this estuary as the study area to formulate an estuarine ecological risk evaluation model. Targeting the estuary's special hydrodynamic condition, this model incorporated variables that were under the influence of human activities and used them as the major factors for partitioning sections of the river according to risk values. It also explored the spatial and temporal distribution laws of estuarine ecological risk. The results showed that, on the whole, the ecological risk of the Daliao River estuary area was relatively high. At a temporal level, runoff was the main factor resulting in differences in ecological risk, while at the spatial level, the ecological risk index was affected by pollutants carried by runoff from upstream, as well as downstream pollution emissions and dilution by seawater at the mouth of the sea. The characteristics of this model make it possible to simulate the spatial and temporal risk distribution in different regions and under different rainfall regimes. This model can thus be applied in other estuarine areas and provides some technical support for analysis and control of ecological destruction in estuary areas.     

A hydrologic network supporting spatially referenced regression modeling in the Chesapeake Bay Watershed

The U.S. Geological Survey has developed a methodology for statistically relating nutrient sources and land-surface characteristics to nutrient loads of streams. The methodology is referred to as SPAtially Referenced Regressions On Watershed attributes (SPARROW), and relates measured stream nutrient loads to nutrient sources using nonlinear statistical regression models. A spatially detailed digital hydrologic network of stream reaches, stream-reach characteristics such as mean streamflow, water velocity, reach length, and travel time, and their associated watersheds supports the regression models. This network serves as the primary framework for spatially referencing potential nutrient source information such as atmospheric deposition, septic systems, point-sources, land use, land cover, and agricultural sources and land-surface characteristics such as land use, land cover, average-annual precipitation and temperature, slope, and soil permeability. In the Chesapeake Bay watershed that covers parts of Delaware, Maryland, Pennsylvania, New York, Virginia, West Virginia, and Washington D.C., SPARROW was used to generate models estimating loads of total nitrogen and total phosphorus representing 1987 and 1992 land-surface conditions. The 1987 models used a hydrologic network derived from an enhanced version of the U.S. Environmental Protection Agency's digital River Reach File, and course resolution Digital Elevation Models (DEMs). A new hydrologic network was created to support the 1992 models by generating stream reaches representing surface-water pathways defined by flow direction and flow accumulation algorithms from higher resolution DEMs. On a reach-by-reach basis, stream reach characteristics essential to the modeling were transferred to the newly generated pathways or reaches from the enhanced River Reach File used to support the 1987 models. To complete the new network, watersheds for each reach were generated using the direction of surface-water flow derived from the DEMs. This network improves upon existing digital stream data by increasing the level of spatial detail and providing consistency between the reach locations and topography. The hydrologic network also aids in illustrating the spatial patterns of predicted nutrient loads and sources contributed locally to each stream, and the percentages of nutrient load that reach Chesapeake Bay.     

Partitioning of mercury onto suspended sediments in estuaries

Radiochemical partitioning experiments using 203Hg have been undertaken with mixtures of river, seawater and sediment samples taken from three geochemically contrasting UK estuaries: the Plym, Beaulieu and Mersey. Species of dissolved Hg were determined using reversed-phase C18 chelating columns and particulate species were determined by sequential leaching with 1 M NH4OAc and 1 M HCl. Mercury had a high particle reactivity with partition coefficients, KDs, ranging from 10(4) to 5 x 10(5) ml g(-1), depending on salinity, the chemical composition of the end-member waters, and on the physico-chemical characteristics of the sediment. Dissolved organic matter present in the waters (humic substances and/or anthropogenic compounds) was found to be the main factor governing the forms of dissolved Hg and their reactivity. From the spiked 203Hg, up to 95% of the dissolved metal was retained on the C18 columns for the Mersey waters, whereas this fraction was < 60% in the Plym and Beaulieu waters. Quasi-irreversible adsorption of Hg onto particles from each estuary was observed over a time-scale of a few hours and < 20% of total particulate Hg was released by the sequential leach. In this paper, physico-chemical processes are proposed to explain the estuarine behaviour of Hg and the results are discussed in terms of Hg availability in estuarine systems.     

Revisiting the Chesapeake Bay Phytoplankton Index of Biotic Integrity

In 2006, a phytoplankton index of biotic integrity (PIBI) was published for Chesapeake Bay Lacouture et al. (Estuaries 29(4):598–616, 2006). The PIBI was developed from data collected during the first 18 years (1985–2002) of the Chesapeake Bay Program long-term phytoplankton and water quality monitoring programs. Combinations of up to nine phytoplankton metrics were selected to characterize bay habitat health according to plankton community condition in spring and summer seasons across four salinity zones. The independent data available at the time for index validation was not sufficient to test the PIBI because they lacked critical index parameters (pheophytin and dissolved organic carbon) and reference samples for some seasons and salinity zones. An additional 8 years of monitoring data (2003–2010) are now available to validate the original index, reassess index performance and re-examine long-term trends in PIBI conditions in the Bay. The PIBI remains sensitive to changes in nutrient and light conditions. Evaluation of the PIBI results over the entire 1985–2010 time period shows no discernible trends in the overall health of Bay habitat based on phytoplankton community conditions. This lack of overall PIBI trend appears to be a combined response to declines in water clarity and improvements in dissolved inorganic nitrogen and dissolved phosphorus conditions in the bay.