An ecophysiological study of some meiofauna species inhabiting a sandy beach at Bermuda

The dominant nematode and harpacticoid species inhabiting a sheltered beach at Bermuda were characterized by their vertical distribution in the sediment, by their tolerance of high temperature under oxic and anoxic conditions, and by their tolerance of extreme pH-values. In 4 species of nematodes the respiratory rate proved to be inversely proportional to the depth at which the species occurs, and directly proportional to the size of the buccal cavity. One species, the nematode Paramonhystera n.sp., is more temperature resistant at zero or near zero pO₂ than at atmospheric oxygen pressure; it is the first marine metazoan in which it can be shown that a specific biological process is favourably affected by anoxic conditions if compared with the situation at normal pO₂.Contribution No. 593, the Bermuda Biological Station     

Nutrient transfer in a marine mutualism: patterns of ammonia excretion by anemonefish and uptake by giant sea anemones

Many symbioses involve multiple partners in complex, multi-level associations, yet little is known concerning patterns of nutrient transfer in multi-level marine mutualisms. We used the anemonefish symbiosis as a model system to create a balance sheet for nitrogen production and transfer within a three-way symbiotic system. We quantified diel patterns in excretion of ammonia by anemonefish and subsequent absorption by host sea anemones and zooxanthellae under laboratory conditions. Rates of ammonia excretion by the anemonefish Amphiprion bicinctus varied from a high of 1.84 μmole g⁻¹ h⁻¹ at 2 h after feeding, to a basal rate of 0.50 μmole g⁻¹ h⁻¹ at 24–36 h since the last meal. Conversely, host sea anemones Entacmaea quadricolor absorbed ammonia at a rate of 0.10 μmole g⁻¹ h⁻¹ during the daytime in ammonia-enriched seawater, but during the night reduced their absorption rate to near zero, indicating that ammonia uptake was driven by zooxanthella photosynthesis. When incubated together, net ammonia excretion was virturally zero, indicating that host anemones absorbed most of the ammonia produced by resident fish. Adult anemonefish weighed about 11 g under laboratory conditions, but on the coral reef may reach up to 64 g, resulting in a maximal potential ammonia load of >200 μmole h⁻¹ produced by two adult fish during daylight hours. In contrast, host sea anemones weighed about 47 g in the laboratory, but under field conditions, large individuals may reach 680 g, so their maximal ammonia clearance rates may reach about 70 μmole h⁻¹ during the daytime. As such, the ammonia load produced by adult anemonefish far exceeds the clearance rate of host anemones and zooxanthellae. Ammonia transfer likely occurs mainly during the daytime, when anemonefish consume zooplankton and excrete rapidly, and in turn the zooxanthellae are photosynthetically active and drive rapid ammonia uptake. We conclude that zooplanktivorous fishes that form mutualisms with coral reef cnidarians may serve as an important link between open water and benthic ecosystems, through the transfer of large quantities of nutrients to zooxanthellate hosts, thus enhancing coral reef productivity.     

Colony level and within colony level selection in honeybees

Summary Although honeybee workers are usually infertile, in queenless colonies some workers can develop ovaries and produce offspring. Therefore the classical Darwinian fitness of workers is not zero. Experimental studies in the Cape honey bee (Apis mellifera capensis) reveal a huge genetic variation for individual fitness of workers. The present study with a one locus, two allele model for reproductive dominance of workers shows that a balanced system between colony level and individual within colony selection plausibly explains the phenomenon of a high genetic variance of worker fitness. In particular, a frequent occurrence of queenless colonies in the population leads to stable polymorphic equilibria. Also the multiple mating system of the honey bee queen supports the propagation of alleles causing reproductive dominance of workers.     

饮用原水中微量NH_3-N的生物膜脱除

针对NH3-N浓度为1mg.l-1的饮用原水,分别以硅锰砂石和聚胺脂海绵作为硝化生物膜载体,考察了自制固定床生物膜反应器的脱氨效果.30d的连续运行结果表明,砂石载体系统达到95%—100%的NH3-N去除率,出水NH3-N浓度接近0,出水NO2--N浓度在0—0.02mg.l-1之间;而海绵载体系统虽然挂膜快,但运行阶段NH3-N去除率仅为10%—35%,出水NH3-N不能达标,且具有生物可降解性,反硝化过程优先导致NO2--N的积累.进一步考察了硅锰砂石生物膜系统稳定运行的最优参数,得出试验条件下,水力停留时间为6min,气水比为1:1,反冲洗周期为6d.硅锰砂石因其良好的孔隙率、粒径分布和密度等物理特性,以及化学稳定性和生物安全性,是含低浓度NH3-N原水生物膜净化的良好载体选择.     

Surface characteristics of shales and implication on metal sorption

Differences in surface characteristics between alkaline and acidic shales are demonstrated in the present study. The alkaline shales are characterized by convex surface titration profiles, while the acidic shale exhibits a concave titration profile. Analysis of surface functional groups reveal that carboxylic acids predominate in alkaline shales and the acidic shale is characterized by C=S, C=N (pyridine derivative) and urea (C=O) functional groups, while it lacks –COOH group. The close proximity between pH and point of zero charge for the most acidic and alkaline shales indicate that surface complexation may not play a dominant role in sorption when the system pH is controlled by these sediments.     

Microbial and environmental effects on avian egg viability: do tropical mechanisms act in a temperate environment?

The viability of freshly laid avian eggs declines after several days of exposure to ambient temperatures above physiological zero, and declines occur faster in tropical than temperate ecosystems. Microbial infection during preincubation exposure has recently been shown as a second cause of egg viability decline in the tropics, but whether microbial processes influence the viability of wild bird eggs in temperate ecosystems is unknown. We determined the microbial load on eggshells, the incidence of microbial penetration of egg contents, and changes in the viability of wild bird eggs (Sialia mexicana, Tachycineta bicolor, Tachycineta thalassina) experimentally exposed to temperate-zone ambient conditions in situ in a mediterranean climate in northern California. Initial microbial loads on eggshells were generally low, although they were significantly higher on eggs laid in old boxes than in new boxes. Eggshell microbial loads did not increase with exposure to ambient conditions, were not reduced by twice-daily disinfection with alcohol, and were unaffected by parental incubation. The rate of microbial penetration into egg contents was low and unaffected by the duration of exposure. Nevertheless, egg viability declined very gradually and significantly with exposure duration, and the rate of decline differed among species. In contrast to studies performed in the tropics, we found little evidence that temperature or microbial mechanisms of egg viability decline were important at our temperate-zone site; neither temperatures above physiological zero nor alcohol disinfection was significantly related to hatching success. Delaying the onset of incubation until the penultimate or last egg of a clutch at our study site may maintain hatching synchrony without a large trade-off in egg viability. These results provide insight into the environmental mechanisms that may be responsible for large-scale latitudinal patterns in avian clutch size and hatching asynchrony.     

Much ado about nothings: using zero similarity points in distance-decay curves

Distance decay is used to describe the (usually exponential) decay in ecological similarity of assemblages between two sites as a function of their distance apart along an environmental gradient. Exponential distance-decay curves are routinely fitted by calculating the ecological similarity between each pair of sites, and fitting a linear regression to the points on a scatter plot of log-similarity vs. distance (x-axis). However, pairs of sites where the assemblages have no species in common pose a problem, because the similarity is zero, and the log transformation cannot be applied. Common fixes to this problem (i.e., either removing or transforming the zero values) are shown to have undesirable consequences and to give widely disparate estimates. A new method is presented as a special case of a generalized dissimilarity model. It is fitted very quickly and easily using existing software, and it does not require removal or transformation of the zero similarity points. Its simplicity makes it convenient for use in conjunction with the resampling methods that are routinely employed to test hypotheses, to obtain standard errors of estimated parameters, or to compare distance-decay curves. A word of caution about standard application of the bootstrap is noted, and modified bootstrap and jackknife alternatives are demonstrated.     

Treating wastewater under zero waste principle using wetland mesocosms

• Smart wetland was designed to treat wastewater according to zero waste principle. • The system included a dynamic roughing filter, Cyperus papyrus (L.) and zeolite. • It removed 98.8 and 99.8% of chemical and bacterial pollutants in 3 days. • The effluent reused to irrigate a landscape and the sludge recycled as fertilizer. • The plant biomass is a profitable resource for antibacterial and antioxidants. The present investigation demonstrates the synergistic action of using a sedimentation unit together with Cyperus papyrus (L.) wetland enriched with zeolite mineral in one-year round experiment for treating wastewater. The system was designed to support a horizontal surface flow pattern and showed satisfactory removal efficiencies for both physicochemical and bacteriological contaminants within 3 days of residence time. The removal efficiencies ranged between 76.3% and 98.8% for total suspended solids, turbidity, iron, biological oxygen demand, and ammonia. The bacterial indicators (total and fecal coliforms, as well as fecal streptococci) and the potential pathogens (Escherichia coli, Staphylococcus aureus, and Pseudomonas aeruginosa) showed removal efficiencies ranged between 96.9% and 99.8%. We expect the system to offer a smart management for every component according to zero waste principle. The treated effluent was reused to irrigate the landscape of pilot area, and the excess sludge was recycled as fertilizer and soil conditioner. The zeolite mineral did not require regeneration for almost 36 weeks of operation, and enhanced the density of shoots (14.11%) and the height of shoots (15.88%). The harvested plant biomass could be a profitable resource for potent antibacterial and antioxidant bioactive compounds. This could certainly offset part of the operation and maintenance costs and optimize the system implementation feasibility. Although the experiment was designed under local conditions, its results could provide insights to upgrade and optimize the performance of other analogous large-scale constructed wetlands.     

Modeling Species' Distributions to Improve Conservation in Semiurban Landscapes: Koala Case Study

Abstract:  Models of species' distributions are commonly used to inform landscape and conservation planning. In urban and semiurban landscapes, the distributions of species are determined by a combination of natural habitat and anthropogenic impacts. Understanding the spatial influence of these two processes is crucial for making spatially explicit decisions about conservation actions. We present a logistic regression model for the distribution of koalas (  Phascolarctos cinereus ) in a semiurban landscape in eastern Australia that explicitly separates the effect of natural habitat quality and anthropogenic impacts on koala distributions. We achieved this by comparing the predicted distributions from the model with what the predicted distributions would have been if anthropogenic variables were at their mean values. Similar approaches have relied on making predictions assuming anthropogenic variables are zero, which will be unreliable if the training data set does not include anthropogenic variables close to zero. Our approach is novel because it can be applied to landscapes where anthropogenic variables are never close to zero. Our model showed that, averaged across the study area, natural habitat was the main determinant of koala presence. At a local scale, however, anthropogenic impacts could be more important, with consequent implications for conservation planning. We demonstrated that this modeling approach, combined with the visual presentation of predictions as a map, provides important information for making decisions on how different conservation actions should be spatially allocated. This method is particularly useful for areas where wildlife and human populations exist in close proximity.     

On the behaviour of the residence time at the bottom of the mixed layer

To understand why the findings of Deleersnijder et al. [(2006), Environ Fluid Mech 6: 25–42]—the residence time in the mixed layer in not necessarily zero at the pycnocline—are consistent with those of Delhez and Deleersnijder [(2006), Ocean Dyn 56:139–150]—the residence time in a control domain vanishes at the open boundaries of this control domain—, it is necessary to consider a control domain that includes part of the pycnocline, in which the eddy diffusivity is assumed to be zero. Then, depending on the behaviour of the eddy diffusivity near the bottom of the mixed layer, the residence time may be seen to exhibit a discontinuity at the interface between the mixed layer and the pycnocline. If such a discontinuity exists, the residence time is non-zero in the former and zero in the latter. This is illustrated by analytical solutions obtained under the assumption that the eddy diffusivity is constant in the mixed layer.     

Valuing environmental amenities through inverse optimization: Theory and case study

Amenity values of private forests are implicit but play a critical role in decision and policy making. This study presents an innovative valuation approach integrating techniques of operations research and economic theory of pricing environmental goods. A forest planning problem was inversed through altering its reward function of timber values so that the observed harvesting behavior became optimal. The discrepancy between the original and new rewards uncovered amenities values which were linked to forest attributes via hedonic models. This method was applied to a case study of the U.S. southern pine region. Depending on forest conditions, total economic values of amenities varied from zero to just under one thousand dollar per ha. At a discount rate of 3%, a typically managed forest generated on average $243 ha⁻¹ of amenities values per annum, more than twice of harvested timber values. Structural diversity and density of large pine trees were the key determinants to preserving forests for environmental amenities.     

Does the conservation of land reduce development? An econometric-based landscape simulation with land market feedbacks

We use an econometrically-based landscape simulation to investigate the effect of conservation on the net change in local development – the amount of land directly protected from development minus the amount of development that may occur on neighboring unprotected private land in response to conservation. First, we use spatial-panel data from Wisconsin to estimate parcel-level subdivision probabilities and density expectations, controlling for the endogenous location of open space. Second, we use these subdivision probabilities and density expectations in a landscape simulation model. Our simulation results indicate that 57% of conserved open space created between 1978 and 2009 generated close to zero net change in local development. This suggests that conserved open space mostly reallocated development in a small neighborhood (in a half-mile radius) rather than altering the total amount of development. We explore the landscape conditions that may lead to conservation having either a positive or negative effect on local development.     

Conservation resource allocation,small population resiliency,and the fallacy of conservation triage

Some conservation prioritization methods are based on the assumption that conservation needs overwhelm current resources and not all species can be conserved; therefore, a conservation triage scheme (i.e., when the system is overwhelmed, species should be divided into three groups based on likelihood of survival, and efforts should be focused on those species in the group with the best survival prospects and reduced or denied to those in the group with no survival prospects and to those in the group not needing special efforts for their conservation) is necessary to guide resource allocation. We argue that this decision-making strategy is not appropriate because resources are not as limited as often assumed, and it is not evident that there are species that cannot be conserved. Small population size alone, for example, does not doom a species to extinction; plants, reptiles, birds, and mammals offer examples. Although resources dedicated to conserving all threatened species are insufficient at present, the world's economic resources are vast, and greater resources could be dedicated toward species conservation. The political framework for species conservation has improved, with initiatives such as the UN Sustainable Development Goals and other international agreements, funding mechanisms such as The Global Environment Facility, and the rise of many nongovernmental organizations with nimble, rapid-response small grants programs. For a prioritization system to allow no extinctions, zero extinctions must be an explicit goal of the system. Extinction is not inevitable, and should not be acceptable. A goal of no human-induced extinctions is imperative given the irreversibility of species loss.     

玉米免耕秸秆覆盖对土壤微生物群落功能多样性的影响

为了研究免耕对土壤微生物功能多样性的影响,本项试验运用Biolog-ECO检测手段,对连续2年的玉米（Zea mays L.）保护性耕作试验全部秸秆覆盖免耕和常规耕作2种耕作处理的土样进行了土壤微生物功能多样性研究。试验表明：（1）免耕土壤微生物对碳源利用率以及不同碳源利用率高于常规耕作,免耕对总体碳源利用率平均值比常规耕作高53.1%;（2）免耕土壤微生物丰富度指数、多样性指数显著高于常规耕作,免耕微生物群落丰富度指数22.33±0.57,多样性指数3.02±0.04,常规耕作微生物群路丰富度指数14.33±1.15,多样性指数2.56±0.12。免耕秸秆覆盖耕作措施促进了土壤微生物活性、增加土壤微生物数量。     

Pattern formation of a predator-prey system with Ivlev-type functional response

In this paper, we investigate the spatial pattern formation of a predator-prey system with prey-dependent functional response Ivlev-type and reaction-diffusion. The Hopf bifurcation of the model is discussed, and the sufficient conditions for the Turing instability with zero-flux boundary conditions are obtained. Based on this, we perform the spiral and the chaotic spiral patterns via numerical simulation, i.e., the evolution process of the system with the initial conditions which was small amplitude random perturbation around the steady state. For the sake of learning the pattern formation of the model further, we perform three categories of unsymmetric initial condition, and find that with these special initial conditions the system can emerge not only spiral pattern but also target pattern and so on, and the effect of these special conditions on the formation of spatial patterns is less and less with more and more iterations but the effect does not decay forever. This indicates that for prey-dependent type predator-prey system, pattern formations do depend on the initial conditions, while for predator-dependent type they do not.     

Control targets for the management of biological systems

Attention is focused on biological systems which are describable in terms of ordinary differential equations subject to human control inputs. The concept of an isochronal system is introduced in order to include systems for which the differential equations are valid only over regularly reoccurring time intervals.It is assumed that the control inputs are to be chosen so that an integral cost function of the state of the system, the control used, current time, and the time interval of the control program is minimized. Problems associated with minimizing this cost function over an infinitely long time interval is then considered. Difficulties inherent with minimizing a cost integral on an infinite time interval are shown to be avoided by minimizing an average of the cost function over an unknown but periodic time interval. Under proper circumstance, the optimal control program for the average cost function is either identical to or a good approximation to the optimal control program for the original cost function over an infinitely long time interval.Necessary conditions are obtained for minimizing an average cost function over an unspecified time interval subject to the system equations. For a given problem the necessary conditions will yield but a single system trajectory in the state space. For management purposes this trajectory may be thought of as a target to which the system should be driven and maintained.A number of examples illustrate the use of the necessary conditions to obtain control targets. Certain problems associated with the stability of the target solutions are illustrated with the examples.     

Foraging strategies and prey encounter rate of free-ranging Little Penguins

There is little information on the effort put into foraging by seabirds, even though it is fundamental to many issues in behavioural ecology. Recent researchers have used changes in the underwater cruising speed of penguins to allude to prey ingestion since accelerations are thought to reflect the encounter and pursuit of prey. In this study, we attached minute accelerometers, to determine flipper beat frequency as a proxy for prey pursuit, to Little Penguins Eudyptula minor foraging in shallow waters in Western Australia. During diving, Little Penguins flapped continuously and at a regular pace of 3.16 Hz while descending the water column and throughout the bottom phase of most dives. However, the frequency and amplitude of wingbeats increased transitorily, reaching 3.5–5.5 Hz, during some dives indicating prey pursuit. Pursuit phases lasted a mean of 2.9±3.3 s and occurred principally during the bottom phases of dives (75.4%). Most dives in all birds (86%) had a clear square-shaped depth profile indicating feeding activity near the seabed in the shallow waters of the bays. Hourly maximum depth, time spent underwater, percentage of dives with pursuit events and catch per unit effort showed an overall increase from zero at ca. 0500 h to a maximum during the hours around mid-day before decreasing to zero by 1900 h. During pursuit phases, Little Penguins headed predominantly downward, probably using the seabed to assist them in trapping their prey. In the light of our results, we discuss depth use by Little Penguins and their allocation of foraging effort and prey capture success as a function of environmental conditions.     

Dynamics of free-living nitrogen-fixing bacterial populations in antagonistic conditions

The survival of free-living nitrogen-fixing microbial populations in the natural ecosystem is crucial for the system maintenance and productivity due to the unique role of these organisms in the global biogeochemical cycle of nitrogen.The dynamics of a nitrogen-fixing microbial population grown at various conditions in a chemostat, together with a competitive (for the common resources) population, was studied through bifurcation analysis of a mathematical model of the system. When the carbon source is found in abundance in the feed, then the competition for this nutrient is low. High amounts of ammonium nitrogen (a substance that inhibits growth of the nitrogen-fixing population) are assimilated for the growth needs of both populations. Under these conditions the nitrogen-fixing population can survive (alone or together with its competitor) in a wide range of parameter values and operating conditions and in some cases nitrogenase synthesis occurs.When the inflow medium contains low carbon substrate concentrations, high competition occurs for this nutrient. In these conditions the nitrogen-fixing population can survive only if it has the competitive advantage over its competitor. However, if the inflow medium contains high ammonium concentrations, the nitrogen-fixing population is inhibited and loses its competitive advantage. Under these conditions, only nitrogen-fixing populations, which are able to establish amensalistic interactions can survive in the system.     

Role of climate and competitors in limiting fitness across range edges of an annual plant

It is often assumed that the geographic distributions of species match their climatic tolerances, but this assumption is not frequently tested. Moreover, few studies examine the relative importance of abiotic and biotic factors for limiting species ranges. We combined multiple approaches to assess the extent to which fitness of a widespread native annual legume, Chamaecrista fasciculata, decreases at and beyond its northern and western range edges, and how this is influenced by the presence of neighbors. First, we examined plant fitness and the effect of neighbors in natural populations at different geographic range locations for three years. Fitness decreased toward the northern range edge, but not the western edge. Neighbor removal had a consistently positive effect on seedpod production across all years and sites. Second, we established experimental populations at sites within the range, and at and beyond the northern and western range edges. We tracked individual fitness and recorded seedling recruitment in the following year (a complete generation) to estimate population growth rate. Individual fitness and population growth declined to near zero beyond both range edges, indicating that C. fasciculata with its present genetic composition will not establish in these regions, given conditions currently. We also carried out a neighbor removal treatment. Consistent with the natural populations, neighbors reduced seedpod production of reproductive adults. However, neighbors also increased early-season survival, and this positive effect early in life history resulted in a net positive effect of neighbors on lifetime fitness at most range locations. Our data show that the population growth rate of C. fasciculata includes values above replacement, and populations are well adapted to conditions up to the edge of the range, whereas the severely compromised fitness at sites beyond the edge precludes immediate establishment of populations and thereby impedes adaptation to these conditions.