Revisiting the Chesapeake Bay Phytoplankton Index of Biotic Integrity

In 2006, a phytoplankton index of biotic integrity (PIBI) was published for Chesapeake Bay Lacouture et al. (Estuaries 29(4):598–616, 2006). The PIBI was developed from data collected during the first 18 years (1985–2002) of the Chesapeake Bay Program long-term phytoplankton and water quality monitoring programs. Combinations of up to nine phytoplankton metrics were selected to characterize bay habitat health according to plankton community condition in spring and summer seasons across four salinity zones. The independent data available at the time for index validation was not sufficient to test the PIBI because they lacked critical index parameters (pheophytin and dissolved organic carbon) and reference samples for some seasons and salinity zones. An additional 8 years of monitoring data (2003–2010) are now available to validate the original index, reassess index performance and re-examine long-term trends in PIBI conditions in the Bay. The PIBI remains sensitive to changes in nutrient and light conditions. Evaluation of the PIBI results over the entire 1985–2010 time period shows no discernible trends in the overall health of Bay habitat based on phytoplankton community conditions. This lack of overall PIBI trend appears to be a combined response to declines in water clarity and improvements in dissolved inorganic nitrogen and dissolved phosphorus conditions in the bay.     

A Fish-Based Index of Biotic Integrity to Assess Intermittent Headwater Streams in Wisconsin, USA

I developed a fish-based index of biotic integrity (IBI) to assess environmental quality in intermittent headwater streams in Wisconsin, USA. Backpack electrofishing and habitat surveys were conducted four times on 102 small (watershed area 1.7–41.5 km²), cool or warmwater (maximum daily mean water temperature ≥22 C), headwater streams in spring and late summer/fall 2000 and 2001. Despite seasonal and annual changes in stream flow and habitat volume, there were few significant temporal trends in fish attributes. Analysis of 36 least-impacted streams indicated that fish were too scarce to calculate an IBI at stations with watershed areas less than 4 km² or at stations with watershed areas from 4–10 km² if stream gradient exceeded 10 m/km (1% slope). For streams with sufficient fish, potential fish attributes (metrics) were not related to watershed size or gradient. Seven metrics distinguished among streams with low, agricultural, and urban human impacts: numbers of native, minnow (Cyprinidae), headwater-specialist, and intolerant (to environmental degradation) species; catches of all fish excluding species tolerant of environmental degradation and of brook stickleback (Culaea inconstans) per 100 m stream length; and percentage of total individuals with deformities, eroded fins, lesions, or tumors. These metrics were used in the final IBI, which ranged from 0 (worst) to 100 (best). The IBI accurately assessed the environmental quality of 16 randomly chosen streams not used in index development. Temporal variation in IBI scores in the absence of changes in environmental quality was not related to season, year, or type of human impact and was similar in magnitude to variation reported for other IBI's.     

Maryland Biological Stream Survey: Development of a Fish Index of Biotic Integrity

As a step towards determining the extent of degradation in non-tidal streams, a multi-metric Index of Biotic Integrity (IBI) based on fish assemblages was developed for the Maryland Biological Stream Survey (MBSS). The MBSS is a probability-based statewide sampling program designed to assess the status of biological resources and to evaluate the effects of anthropogenic activities. We used data from 419 MBSS sites sampled in 1994-95 to develop the IBI. Two distinct geographic strata, corresponding with ecoregional and physiographic boundaries, were identified via cluster analysis and multivariate analysis of variance (MANOVA) as supporting distinctly different species groups. Reference conditions were based on minimally degraded sites. We quantitatively evaluated the ability of various attributes of the fish assemblage (candidate metrics) to discriminate between these reference sites and sites known to be degraded, using statistical tests and classification efficiency. Provisional formulations of the IBI were selected for each region based on high classification efficiency and broad representation of fish assemblage attributes. Fish IBI scores for 1995 MBSS sites spanned a wide range of biological conditions, from good to very poor. Over all six basins sampled in 1995, half of the stream miles fell into the range of good to fair. Roughly 25% of stream miles showed some degradation. The IBI will be used in conjunction with physical and chemical data to answer critical questions about the health of Maryland streams and the relative impacts of human-induced stresses on the state's aquatic systems.     

Development of a Grassland Integrity Index Based on Breeding Bird Assemblages

We utilized landscape and breeding bird assemblage data from three Breeding Bird Survey (BBS) routes sampled from 1965–1995 to develop and test a grassland integrity index (GII) in a mixed-grass prairie area of Oklahoma. The overall study region is extensively fragmented from long-term agricultural activity, and native habitat remnants have been degraded by recent encroachment of woody vegetation, namely eastern redcedar (Juniperus virginiana L.). The 50 individual bird survey points along the BBS routes, known as stops, were used as sample sites. Our process first focused on developing a grassland disturbance index (GDI) as a measure of cumulative landscape disturbances for these sites. The GDI was based on five key landscape variables identified in an earlier species-level study of long-term avian community dynamics: total tree, shrub, and herbaceous vegetation cover indices, overall mean landscape patch size, and grassland patch core size. The GII was then developed based on breeding bird assemblage data. Assemblages were based on commonly used response guilds reflective of five avian life history parameters: foraging mode/location, nesting location, habitat specificity, migratory pattern, and dietary guild. We tested the response of 78 candidate assemblage metrics to the GDI, and eliminated those with no or poor response or with high correlations (redundant), resulting in 13 metrics for use in the final index. Individual metric scores were scaled to fall between 0 and 10, and the cumulative index to range from 0 to 100. Although broader application and refinement are possible, the avian-based GII has an advantage over labor-intensive, habitat-based monitoring in that the GII is derived from readily available long-term BBS data. Therefore, the GII shows promise as an inexpensive tool that could easily be applied over other areas to monitor changes in regional grassland conditions.     

A Provisional Fish Index of Biotic Integrity for Assessing Ouachita Mountains Streams in Arkansas, U.S.A.

Multimetric indices are often used to monitor aquatic-resource conditions. We used existing fish-collection data from streams to develop an Index of Biotic Integrity (IBI), which is a multimetric index, for the Ouachita Mountains ecoregion in Arkansas, U.S.A. Each fish-collection site was categorized as reference or non-reference. We examined 62 candidate IBI metrics, and selected 12 non-redundant metrics that differentiated best between reference and non-reference sites. The selected metrics were: Percent (of individuals) as Black Bass; Percent as Benthic Feeders; Percent as Centrarchids; Percent as Cyprinids; Percent as Ictalurids; Percent as Mineral, Site-Prep Spawners; Percent as Mineral, Site-Prep, Parental-Care Spawners; Percent as Simple, Mineral Substrate Spawners; Percent as Miscellaneous, Site-Prep, Parental-Care Spawners; Total Number of Centrarchid Species; Total Number of Arkansas Department of Environmental Quality (ADEQ) Ouachita Mountains Indicator Species; and Total Number of ADEQ Ouachita Mountains Key Species. We standardized each metric to score from 0 to 10 by using linear equations and threshold limits. Some selected IBI metrics had their scoring criteria adjusted to account for watershed size (i.e., stream size). We standardized the IBI to score from 0 to 100. In addition, we determined that our Percent as Black Bass and Percent as Benthic Feeders metrics contributed most to IBI scores in reference conditions, but their contributions decreased with decreasing stream conditions. Reproductive metrics contributed most in degraded stream conditions. Furthermore, we identified relations between IBI metrics and water-quality and land-use variables; some relations were counterintuitive. Unexpected relations may be random observations explained by limited ranges of land-use and water-quality variables. When select water-quality and land-use variables were included in a principal component analysis, a composite Land Use Intensity variable explained most of the model variance. Although the IBI has not been independently validated, the PCA, as well as other superficial analyses, indicated that the IBI should be able to differentiate stream conditions.     

Methods development and use of macroinvertebrates as indicators of ecological conditions for streams in the Mid-Atlantic Highlands Region

The Mid-Atlantic Highlands Assessment (MAHA) included the sampling of macroinvertebrates from 424 wadeable stream sites to determine status and trends, biological conditions, and water quality in first through third order streams in the Mid-Atlantic Highlands Region (MAHR) of the United States in 1993–1995. We identified reference and impaired sites using water chemistry and habitat criteria and evaluated a set of candidate macroinvertebrate metrics using a stepwise process. This process examined several metric characteristics, including ability of metrics to discriminate reference and impaired sites, relative scope of impairment, correlations with chemical and habitat indicators of stream disturbance, redundancy with other metrics, and within-year variability. Metrics that performed well were compared with metrics currently being used by three states in the region: Pennsylvania, Virginia, and West Virginia. Some of the metrics used by these states did not perform well when evaluated using regional data, while other metrics used by all three states in some form, specifically number of taxa, number of EPT taxa, and Hilsenhoff Biotic Index, performed well overall. Reasons for discrepancies between state and regional evaluations of metrics are explored. We also provide a set of metrics that, when used in combination, may provide a useful assessment of stream conditions in the MAHR.     

Bird Species Assemblages as Indicators of Biological Integrity in Great Basin Rangeland

The study evaluates the potential for bird species assemblages to serve as indicators of biological integrity of rangelands in the Great Basin in much the same way that fish and invertebrate assemblages have been used as indicators in aquatic environments. Our approach was to identify metrics of the bird community using relatively simple sampling methods that reflect the degree of rangeland degradation and are consistent over a variety of vegetation types and geographic areas. We conducted the study in three range types (i.e., potential natural plant community types) in each of two widely separated areas of the Great Basin: south-eastern Idaho (sagebrush steppe range types) and west-central Utah (salt-desert shrub range types). Sites were selected in each range type to represent three levels of grazing impact, and in Idaho included sites modified for crested wheatgrass production. Birds were sampled by point counts on 9 100-m radius plots at 250-m spacing on each of 20 sites in each area during the breeding season. In sagebrush-steppe, 964 individuals in 8 species of passerine birds were used in analyses. Five metrics were significantly related to impact class, both when analyzed within range type and when analyzed with all range types combined. Species richness, relative abundance of shrub obligate species, and relative abundance of Brewer's sparrow were generally lower for the higher impact classes, whereas the reverse was true for dominance by a single species and for relative abundance of horned larks. In contrast, total number of individuals did not differ significantly as a function of impact class. In salt-desert shrub, a total of 843 birds in 4 species were included in analyses, 98% of which were horned larks. None of the metrics identified above was significantly related to impact class. Two metrics for breeding birds in sagebrush steppe (species richness and dominance) showed little overlap between values for the extremes of impact class, and thus they have potential as indicators of biological integrity. However, the sensitivity of these metrics appears to be greatest at the high impact end of the spectrum, which suggests they may have limited utility in distinguishing between sites having light and moderate impact.     

Towards a Regional Index of Biological Integrity: the Example of Forested Riparian Ecosystems

Our premise is that measures of ecological indicators and habitat conditions will vary between reference standard sites and reference sites that are impacted, and that these measures can be applied consistently across a regional gradient in the form of a Regional Index of Biological Integrity (RIBI). Six principles are proposed to guide development of any RIBI: 1) biological communities with high integrity are the desired endpoints; 2) indicators can have a biological, physical, or chemical basis; 3) indicators should be tied to specific stressors that can be realistically managed; 4) linkages across geographic scales and ecosystems should be provided; 5) reference standards should be used to define target conditions; and 6) assessment protocols should be efficiently and rapidly applied. To illustrate how a RIBI might be developed, we show how four integrative bioindicators can be combined to develop a RIBI for forest riparian ecosystems in the Mid-Atlantic states: 1) macroinvertebrate communities, 2) amphibian communities, 3) avian communities, and 4) avain productivity, primarily for the Louisiana waterthrush (Seirius motacilla). By providing a reliable expression of environmental stress or change, a RIBI can help managers reach scientifically defensible decisions.     

Development and evaluation of the Lake Macroinvertebrate Integrity Index (LMII) for New Jersey lakes and reservoirs

In response to the recent focus by the U.S. EnvironmentalProtection Agency on bioassessment of lakes, a multimetric index was developed for New Jersey lakes and reservoirs using benthicmacroinvertebrates. Benthic samples were collected fromreference and impaired lakes with muck and intermediate sedimentsin central and northern New Jersey during summer 1997. We used astepwise process to evaluate properties of candidate metrics andselected five for the Lake Macroinvertebrate Integrity Index(LMII): Hilsenhoff Biotic Index (HBI), percent chironomidindividuals, percent collector-gatherer taxa, percentoligochaetes/leeches, and number of Diptera taxa. We scoredmetrics as the fraction of the best expected value (based on allsites) achieved at a site and summed them into the LMII. Evaluation of the LMII showed that it discriminated well betweenreference and impaired lakes and was strongly related to severalpotential stressors. Chemical and physical gradients distinguished between reference and impaired lakes, and the LMIIsummarized these gradients well. The LMII corresponded stronglywith land use, but some lakes with more urban land use stillachieved high scores. Based on a power analysis, the ability ofthe LMII to detect differences in condition was sensitive to thenumber of samples from each lake.     

Geographic Analysis of Species Richness and Community Attributes of Forest Birds from Survey Data in the Mid-Atlantic Integrated Assessment Region

Species richness of local communities is a state variable commonly used in community ecology and conservation biology. Investigation of spatial and temporal variations in richness and identification of factors associated with these variations form a basis for specifying management plans, evaluating these plans, and for testing hypotheses of theoretical interest. However, estimation of species richness is not trivial: species can be missed by investigators during sampling sessions. Sampling artifacts can lead to erroneous conclusions on spatial and temporal variation in species richness. Here we use data from the North American Breeding Bird Survey to estimate parameters describing the state of bird communities in the Mid-Atlantic Assessment (MAIA) region: species richness, extinction probability, turnover and relative species richness. We use a recently developed approach to estimation of species richness and related parameters that does not require the assumption that all the species are detected during sampling efforts. The information presented here is intended to visualize the state of bird communities in the MAIA region. We provide information on 1975 and 1990. We also quantified the changes between these years. We summarized and mapped the community attributes at a scale of management interest (watershed units).     

Biotic balance and biomass assessment of the ocean population

In marine ecosystems the destruction and release of chemical pollutants occur mainly due to the activity of their biotic components via the processes of biodifferentiation and biosedimentation. These porcesses determine the assimilative capacity of the oceans and their areas. During the development (succession) of the planktonic community in the euphotic layer of the oceans changes occur of both the quantity of produced organic matter and portion transferred from the community to the deeper layers and in sediments. Waters of different trophicity correspond to different stages of the community's development. Taking into account the areas of waters with different trophicity and the characteristic biomass estimates of the basic structural components of the plankton community, the authors have tried to assess the annual primary production of the oceans. Its total amount makes up 65×10⁹ tons C. Certain estimates for phytoplankton, bacterioplankton, microzooplankton and mesozooplankton content were obtained.     

State of the Estuaries in the Mid-Atlantic Region of the United States

The U.S. EPA has prepared a State of the Region Report for Mid-Atlantic Estuaries to increase knowledge of environmental condition for improved environmental management. Sources of information included the National Estuary Programs, the Chesapeake Bay Program, the state monitoring programs in Delaware, Maryland, and Virginia, Federal programs such as National Status & Trends, National Shellfish Register, National Wetlands Inventory, the Environmental Monitoring and Assessment Program, and other primary literature sources. The state of the estuarine environment was summarized using indicators for water and sediment quality, habitat change, condition of living resources, and aesthetic quality. Each indicator was briefly discussed relative to its importance in understanding estuarine condition. Wherever possible, data from multiple programs were used to depict condition. Finally, an overall evaluation of estuarine condition in the region was determined. The usefulness of monitoring programs that collect consistent information with a well-defined sampling design cannot be overemphasized.     

Assessment of the Condition of Agricultural Lands in Five Mid-Atlantic States

Indicators of the condition and sustainability of agricultural lands in five Mid-Atlantic states were measured in 1994. Indicators were selected to reflect crop productivity and land stewardship on annually harvested herbaceous crop (AHHC) land, which covers almost 10% of the land area in this region. Overall, condition of agricultural lands in the region is good. Crops generally yielded more than those grown in the 1980s, with a mean observed/expected yield index greater than 1. The mean soil quality index was slightly better than a "moderate" rating for crop growth. Almost 2/3 of the AHHC land is covered by crop rotation plans, with the remaining land mostly in hay fields. Insecticides were applied to less than 20% of AHHC land, and less than 20% of the land where pesticides were applied has high to moderately high potential for pesticides leaching into groundwater. However, integrated pest management (IPM) is practiced on less than 20% of AHHC land. Hay showed more efficient use of nitrogen than seed crops, and non-tilled sites, which are mostly hay, had more microbial biomass (suggesting more nutrient cycling) than tilled sites. This information could provide a baseline for a long-term monitoring program for agroecosystems in the region.     

Integrated Environmental Assessment of the Mid-Atlantic Region with Analytical Network Process

A decision analysis method for integrating environmental indicators was developed. This was a combination of Principal Component Analysis (PCA) and the Analytic Network Process (ANP). Being able to take into account the interdependency among variables, the method was capable of ranking ecosystems in terms of environmental conditions and suggesting cumulative impacts across a large region. Using data on land cover, population, roads, streams, air pollution, and topography of the Mid-Atlantic Region of the United States, we were able to point out areas which were in relatively poor condition and/or vulnerable to future deterioration regarding various environmental aspects. The method offered an easy and comprehensive way to combine the strengths of conventional multivariate statistics (PCA) and decision-making science tool (ANP) for integrated environmental assessment.     

A Generalized Water Quality Index for Taiwan

By exploring the behavior and limitations of conventional methods for quality evaluation, a better overall index for water quality in Taiwan and its application in Keya River are proposed. The thirteen variables are employed for the quality assessment. Numerical scales relating to the degree of quality are established for each variable to assess variations in quality and to convey findings in a comprehensive manner to others. The employed variables are categorized into three aspects referred to the principal components analysis, which are 'organics', 'particulates' and 'microorganisms'. The overall index consists of the geometric mean for the three defined aspects and multiplying by three coefficients, which reflect quality degrees of temperature, pH and toxicity, respectively. Besides, the arithmetic mean is addressed among the variables associated in the same aspect. Finally, a fresh, mixed aggregation function is developed for ensuring that the index score tells us something useful and does not hide important information. A case study of the Keya River is made to illustrate the application of this new index system. The new proposed index provides comprehensive information for water quality assessment, than the existing index used in Taiwan does.     

Condition of the Mid-Atlantic Estuaries: Production of a State of the Environment Report

The U.S. Environmental Protection Agency has released a report entitled Condition of the Mid-Atlantic Estuaries. That report summarizes the findings of several studies conducted by federal and state agencies and academic institutions in Chesapeake Bay, Delaware Estuary, and the coastal bays of Delaware, Maryland, and Virginia, and simultaneously addresses two distinct audiences: environmental managers and the general public. This paper documents the process of preparing the Estuaries Report, emphasizing the lessons learned in merging information from a wide-variety of sources and in reporting the results to multiple audiences. The major difficulties in preparing the report included: 1) choosing a format and topics that adequately addressed both environmental managers and the public, 2) resolving spatial and temporal disparities in the assembled data sets, and 3) establishing threshold values that distinguished between acceptable and unacceptable conditions in indicators. Our solutions to these challenges and alternatives are discussed. We conclude that a small team of knowledgeable scientists can effectively merge the information of diverse sources into a document that is useful to both environmental managers and the interested public. However, considerable interaction between the team and other scientists was necessary to resolve ambiguities and assure relevancy and accuracy. These findings support the proposition that the vast sources of existing environmental information can be easily and effectively used to assess the ecological condition across large regions.     

An Interactive, Spatial Inventory of Environmental Data in the Mid-Atlantic Region

The U.S. Environmental Protection Agency (EPA) is working with federal, state, local, and non-governmental partners to produce an interactive, spatial inventory of environmental data in the mid-Atlantic region. The inventory will include maps of sampling locations, lists of measurements, and design information for hundreds of research sites and monitoring programs. It will also feature user-defined queries, resulting in customized maps that satisfy search criteria. (For example, "Display the probability-based surveys that measure dry deposition and nutrient availability in soils"). The inventory will be used in an interagency pilot study, instigated by the National Science and Technology Council's Committee on the Environment and Natural Resources, to integrate environmental monitoring and research activities. The inventory will also provide information for a regional ecological assessment led by EPA Region 3 and the Office of Research and Development. In addition, an interagency consortium will use the inventory to identify suitable field data for assessing the accuracy of satellite imagery. In each of these three applications, the inventory will be tested and evaluated as a potential prototype for completing additional regions of the U.S. Maintained as an Oracle database, the inventory is accessible on the internet at http://www.epa.gov/monitor/. Currently, ten inventory records are on-line for demonstration. The complete federal inventory of approximately 180 records will be accessible on-line by October, 1997; approximately 200 state, local and non-governmental records are scheduled for on-line access by April, 1998.     

Assessing the Impacts of Forests on Human Welfare: Preliminary Results from the Mid-Atlantic Integrated Assessment

This paper presents results from the first phase of the socio-economic assessment of forest ecosystems in the Mid-Atlantic Integrated Assessment (MAIA). First, we present results of the analysis of changes in the distribution of human population and forest land use in the region. Then, trends in wood products employment and income between 1975–95 are used to examine the economic contributions of forest-based industries in the Mid-Atlantic region. Between 1970–90 the population of the MAIA region increased by 14% (4.3 million people) resulting in the average population density increasing by 25 people per square mile from 179 to 204 people per square mile. Nevertheless, population density was lower in large parts of the region in 1990 than in 1950. Although forests dominate the MAIA landscape, the trend is toward more people owning smaller forest land holdings, with developed lands increasing by 21% and rural lands decreasing by 2.64% between 1982–94. All of this suggests increasing forest fragmentation in all states of the region except New York, Pennsylvania, and West Virginia. Forest industry has been an important contributor to the economy of the MAIA region, producing an average of a quarter million jobs (2.03% of all wage employment) and generating $4.5 billion in wages and salaries each year between 1975–95. If recent trends continue, forest industry will continue to be an important source of employment and income for parts of some states in the MAIA region; however, the forest industry's importance relative to the entire mid-Atlantic economy will likely continue to decline in the 21^st century.     

Integrity of Tailings Infrastructure and Information Management: A GIS-Based Conceptual Model

Managing the integrity of tailings infrastructure is an important aspect of handling mine tailings. Unfortunately, little research is directed towards its efficient modeling. This paper presents salient aspects of tailings management. It proposes an integrated geographic information systems (GIS)-based conceptual model for efficient handling of these aspects. The paper also discusses the various integrated modules and comments on the systematic implementation of the model to achieve desired results. The modules include: structural integrity management (SIM), release impact assessment (RIA), and hazardous risk assessment and control (HRAC).