Soil microbial communities associated with Bt and non-Bt corn in three soils

The effects of expression of Cry endotoxin by Bt corn (transgenic corn engineered to express Bacillus thuringiensis toxin) on soil microbial community structure were assessed in a growth chamber experiment. Two lines of transgenic corn expressing different Cry endotoxins were compared with their respective non-transgenic isolines in three soil types with differing textures. Phospholipid fatty acid (PLFA) profiles from bulk soil and community-level physiological profiles (CLPP) from the rhizosphere community were used to assess community structure. Differences in PLFA profiles due to soil type were significant, accounting for 73% of the total variability in the dataset. Differences in bacterial and fungal CLPP profiles due to soil type were statistically significant, but probably not biologically important, accounting for 6.3 and 3.8% of the total variability, respectively. Neither expression of Cry endotoxin nor corn line had a significant effect on microbial profiles, except in the high-clay soil where both factors significantly affected bacterial CLPP profiles (accounting for 6.6 and 6.1% of the variability in that soil, respectively). Expression of Cry endotoxin also significantly reduced the presence of eukaryotic PLFA biomarker in bulk soils, although it is unclear which groups of eukaryotes were affected. We conclude that the effects of transgenic Bt corn in this short-term experiment are small, and longer-term investigations are necessary.     

Impact of genetically modified crops on soil- and plant-associated microbial communities

Transgenic or genetically modified plants possess novel genes that impart beneficial characteristics such as herbicide resistance. One of the least understood areas in the environmental risk assessment of genetically modified crops is their impact on soil- and plant-associated microbial communities. The potential for interaction between transgenic plants and plant residues and the soil microbial community is not well understood. The recognition that these interactions could change microbial biodiversity and affect ecosystem functioning has initiated a limited number of studies in the area. At this time, studies have shown the possibility that transgenes can be transferred to native soil microorganisms through horizontal gene transfer, although there is not evidence of this occurring in the soil. Furthermore, novel proteins have been shown to be released from transgenic plants into the soil ecosystem, and their presence can influence the biodiversity of the microbial community by selectively stimulating the growth of organisms that can use them. Microbial diversity can be altered when associated with transgenic plants; however, these effects are both variable and transient. Soil- and plant-associated microbial communities are influenced not only by plant species and transgene insertion but also by environmental factors such as field site and sampling date. Minor alterations in the diversity of the microbial community could affect soil health and ecosystem functioning, and therefore, the impact that plant variety may have on the dynamics of the rhizosphere microbial populations and in turn plant growth and health and ecosystem sustainability, requires further study.     

Impact of genetically modified crops and their management on soil microbially mediated plant nutrient transformations

One of the potential environmental effects of the recent rapid increase in the global agricultural area cultivated with transgenic crops is a change in soil microbially mediated processes and functions. Among the many essential functions of soil biota are soil organic matter decomposition, nutrient mineralization and immobilization, oxidation-reduction reactions, biological N fixation, and solubilization. However, relatively little research has examined the direct and indirect effects of transgenic crops and their management on microbially mediated nutrient transformations in soils. The objectives of this paper are to review the available literature related to the environmental effects of transgenic crops and their management on soil microbially mediated nutrient transformations, and to consider soil properties and climatic factors that may affect the impact of transgenic crops on these processes. Targeted genetic traits for improved plant nutrition include greater plant tolerance to low Fe availability in alkaline soils, enhanced acquisition of soil inorganic and organic P, and increased assimilation of soil N. Among the potential direct effects of transgenic crops and their management are changes in soil microbial activity due to differences in the amount and composition of root exudates, changes in microbial functions resulting from gene transfer from the transgenic crop, and alteration in microbial populations because of the effects of management practices for transgenic crops, such as pesticide applications, tillage, and application of inorganic and organic fertilizer sources. Possible indirect effects of transgenic crops, including changes in the fate of transgenic crop residues and alterations in land use and rates of soil erosion, deserve further study. Despite widespread public concern, no conclusive evidence has yet been presented that currently released transgenic crops, including both herbicide and pest resistant crops, are causing significant direct effects on stimulating or suppressing soil nutrient transformations in field environments. Further consideration of the effects of a wide range of soil properties, including the amount of clay and its mineralogy, pH, soil structure, and soil organic matter, and variations in climatic conditions, under which transgenic crops may be grown, is needed in evaluating the impact of transgenic crops on soil nutrient transformations. Future environmental evaluation of the impact of the diverse transgenic crops under development could lead to an improved understanding of soil biological functions and processes.     

The removal of lignin and phenol from paper mill effluents by electrocoagulation

This study aims to investigate the treatment of paper mill effluents using electrocoagulation. Removal of lignin, phenol, chemical oxygen demand (COD) and biological oxygen demand (BOD) from paper mill effluents was investigated at various current intensities by using different electrodes (Al and Fe) and at various electrolysis times (1.0, 2.5, 5.0 and 7.5min). It was observed that the experiments carried out at 12V, an electrolysis time of 2min and a current intensity of 77.13mA were sufficient for the removal of these pollutants with each electrode. The removal capacities of the process using an Al electrode were 80% of lignin, 98% of phenol, 70% of BOD, and 75% of COD after 7.5min. Using an Fe electrode the removal capacities were 92%, 93%, 80% and 55%, respectively. In addition, it was found that removal of lignin, phenol, BOD and COD increased with increasing current intensity. In the experiments carried out at different current intensities, higher removal can be explained through a decrease in intra-resistance of solution and consequently an increase at the transfer speed of organic species to electrodes. It was also found that Al electrode performs higher efficiency than Fe electrode except for COD removal. However, the time required for removal of BOD was more than that of COD. The results suggest that electrocoagulation could be considered as an effective alternative to paper mill effluents treatment.     

白腐菌降解纤维素和木质素的研究进展

纤维素和木质素是潜在的可再生资源,近年来,利用微生物对它们进行降解已成为研究的热点。虽然纤维素较木质素易降解,但其被木质素包裹,故降解的关键问题就是木质素的降解。本文从木质纤维素的生物可降解性出发,重点讨论白腐菌降解木质素酶系及其作用机理。     

Enzymatic hydrolysis of banana stems (Musa acuminata): Optimization of process parameters and inhibition characterization

In current work, an optimum solid loading (solid: liquid = 1:20), pH (4.8), temperature (50°C), and enzyme dosing of 20 filter paper unit (amount of enzyme required to release 1 µmol of glucose as reducing sugar from filter paper in per mL per minute) were enumerated for enzymatic hydrolysis of banana stem using cellulase from Trichoderma reesei. Further, inhibition study on enzymatic hydrolysis of banana stem was investigated by the supplementation of monosaccharides (glucose, galactose, mannose, xylose, and arabinose), disaccharide (cellobiose), and inhibitors (acetic acid and furfural obtained from pre-enzymatic hydrolysis steps). Glucose and cellobiose showed inhibitory effect on enzymatic hydrolysis of pretreated banana stem at or above 8 g/L while galactose, mannose, and xylose showed a significant inhibitory effect at or above 4 g/L. Instead of inhibition, arabinose enhanced the enzymatic hydrolysis with increase in total reducing sugars. Acetic acid did not show any significant inhibition while furfural inhibited the system at a comparative low concentration of 2 g/L. Further, scanning electron microscopy analysis was performed to investigate the difference in ultra-structural morphology of raw biomass, pretreated biomass, and biomass obtained after enzymatic hydrolysis.     

Efficiency of removal of cadmium from aqueous solutions by plant leaves and the effects of interaction of combinations of leaves on their removal efficiency

Removal of cadmium from aqueous solutions using 20 species of plant leaves and combinations of these leaves have been studied. Several factors affecting the removal efficiency have been studied. The most efficient types of plant leaves for the removal of cadmium are those of styrax, plum, pomegranate and walnut. The interaction effect of the combined leaf samples on the efficiency of removal of cadmium has been found to be additive in combinations involving styrax plant leaves but seems to be antagonistic in all other combinations. The optimum experimental conditions for removal of cadmium have been found to be at pH 4.1, using high concentrations of naturally dried plant leaves, using ground leaves and to remove cadmium from agitated aqueous solutions. The percentage of metal removed at an initial cadmium concentration of 10mg/l by the most efficient types of leaves have been found to be 85% for styrax leaves, 85% for plum leaves, 80% for pomegranate leaves, 78% for walnut leaves and 77% for meddler leaves. The presence of foreign ions or complexing agents has been found to reduce the efficiency of removal of cadmium by plant leaves. About 80-85% of the cadmium in charged plant leaves has been released under the influence of changing the pH of the solution, addition of competing ions and the addition of EDTA. The results of removal of cadmium by plant leaves have been found to follow the Freundlich adsorption isotherm, first-order reaction with respect to cadmium and to have intra-pore diffusion as the rate-limiting step.     

Impact of transgenic Bt maize residues on the mycotoxigenic plant pathogen Fusarium graminearum and the biocontrol agent Trichoderma atroviride

Transformation of maize with genes encoding for insecticidal crystal (Cry) proteins from Bacillus thuringiensis (Bt) could have an impact on the saprophytic survival of plant pathogens and their antagonists on crop residues. We assessed potential effects on the mycotoxin deoxynivalenol (DON)-producing wheat and maize pathogen Fusarium graminearum and on the biocontrol agent Trichoderma atroviride. Purified Cry1Ab protein caused no growth inhibition of these fungi on agar plates. Cry1Ab concentrations above levels common in Bt maize tissue stimulated the growth of F. graminearum. The fungi were also grown on gamma-radiation-sterilized leaf tissue of four Bt maize hybrids and their non transgenic isolines collected at maize maturity on a field trial in 2002 and 2003. Both fungi degraded the Cry1Ab protein in Bt maize tissue. Fungal biomass quantification with microsatellite-based polymerase chain reaction (PCR) assays revealed differential fungal growth on leaf tissue of different maize varieties but no consistent difference between corresponding Bt and non-Bt hybrids. Generally, year of maize tissue collection had a greater impact on biomass production than cultivar or Bt transformation. The mycotoxin DON levels observed in maize tissue experiments corresponded with patterns in F. graminearum biomass, indicating that Bt transformation has no impact on DON production. In addition to bioassays, maize leaf tissue was analyzed with a mass spectrometer-based electronic nose, generating fingerprints of volatile organic compounds. Chemical fingerprints of corresponding Bt and non-Bt leaf tissues differed only for those hybrid pairs that caused differential fungal biomass production in the bioassays. Our results suggest that Cry1Ab protein in maize residues has no direct effect on F. graminearum and T. atroviride but some corresponding Bt/non-Bt maize hybrids differ more in composition than Cry protein content alone, which can affect the saprophytic growth of fungi on crop residues.     

Science and values in risk assessment: The case of deliberate release of genetically engineered organisms

To make more responsible decisions regarding risk and to understand disagreements and controversies in risk assessments, it is important to know how and where values are infused into risk assessment and how they are embedded in the conclusions. In this article an attempt is made to disentangle the relationship of science and values in decision-making concerning the deliberate release of genetically modified organisms (GMOs) into the environment. This exercise in applied philosophy of science is based on Helen Longino's contextual empiricism which attempts to reconcile the objectivity of science with its social and cultural construction. Longino distinguishes different levels of research on which values apparently contextual with respect to a given research program can shape the knowledge emerging from that program. Her scheme is applied for locating and identifying the values that affect environment risk assessments of the field experiments with GMOs. The article concludes with some provisional suggestions for the decision process and the role of scientists in it.     

Characterization of a fenpropathrin-degrading strain and construction of a genetically engineered microorganism for simultaneous degradation of methyl parathion and fenpropathrin

A gram-negative fenpropathrin-degrading bacterial strain Sphingobium sp. JQL4-5 was isolated from the wastewater treatment sludge of an insecticide factory. Strain JQL4-5 showed the ability to degrade other pyrethroid insecticides, but it was not able to degrade methyl parathion. To enhance its degrading range of substrate, a methyl parathion hydrolase gene (mpd) was successfully introduced into the chromosome of strain JQL4-5 with a mini-Tn-transposon system. A genetically engineered microorganism (GEM) named JQL4-5-mpd resulted, which was capable of simultaneously degrading methyl parathion and fenpropathrin. Soil treatment results indicated that JQL4-5-mpd is a promising multifunctional bacterium in the bioremediation of multiple pesticide-contaminated environments.     

The prediction of scenic beauty from landscape content and composition

Two studies were conducted to examine distance classes of vegetation (foreground, middleground and background) and scene composition (presence of vegetation in left, center or right section of the image) as predictors of perceived scenic beauty. In study one, 41 students rated 63 landscape scenes with regard to scenic beauty. The Scenic Beauty Estimation Method was used to derive interval scale beauty values (SBEs). For each landscape image, areal measures of vegetation in each distance class and for each vertical section were taken and used as predictors. Presence of haze, clouds and human impacts were also recorded. Among the most important contributors to scenic beauty were amount of center middleground vegetation, and center background vegetation. Left foreground vegetation and right foreground vegetation were found to have significant and opposing regression weight signs—negative for the left and positive for the right. Study two was conducted to determine whether these opposing regression weight signs for foreground vegetation were due to a perceptual right-left bias or to some specific content in the image itself. In the second study, the photographic slides used to present landscape scenes to subjects were reversed so that the content which was previously on the right was now left, and vice versa. Thirty-nine students rated the reversed slides with regard to their scenic beauty. The signs of the regression weights in study two shifted such that left foreground was now positively valued and right foreground was negatively valued. This finding suggests that viewers are sensitive to foreground content and its placement in the image, and not simply to one side of the field of vision.     

Lead in particulate deposits and in leaves of roadside plants, Karachi, Pakistan

Lead concentrations were determined for particulates which were deposited during one year on the leaves of roadside plants in Karachi. The particulates were collected from the leaves at a height of one metre. The lead accumulated by the leaves of different species was also measured. A statistically significant correlation was found between the number of passing petrol driven vehicles and the lead concentration in the deposits at different designated sites. However, no significant correlation was found between the concentration in the deposits and the lead accumulated by the leaves. A lead concentration of 30.00±6.6 ppm was recorded as the highest concentration in the particulate deposits, while maximum lead accumulated by the leaves was noted as 3.12±1.09 ppm.     

嗜冷菌的分子机制及其应用简介

文章主要从嗜冷菌的生存环境及分子机制,综述了其生理特性,从而给人们提供了利用这类极端微生物为社会服务的有效途径和广阔前景。     

Effects of watershed configuration and composition on downstream lake water quality

We evaluated the relationships between landscape characteristics and lake water quality in receiving waters by regressing four water quality responses on landscape variables that were measured for whole watersheds and three different buffer distances (30, 60, and 120 m). Classical percolation theory was used to conceptualize nutrient pathways and to explain nonlinear responses. The response variables were total nitrogen (TN), total phosphorus (TP), chlorophyll-a (Chl-a), and Secchi transparency (SD). Landscape data were obtained from satellite image-derived maps of 130 watersheds in Iowa using geographic information systems software. We developed regression models with a stepwise protocol selecting the optimal number of significant explanatory variables. Configuration variables such as contagion, the cohesion of cropland and urban land, and the aggregation index of forest were very important and more important than variables assessing landscape composition (e.g., percentage farmland). Whole watershed models predicted between 15 and 67% of the variability in TN, TP, Chl-a, and SD. Proximity-explicit data offered only slightly improved statistical power over land cover data derived from the entire watershed for variables TN, Chl-a. and SD, but not for TP.     

Physiological and morphological response patterns of Populus deltoides to alluvial groundwater pumping

We examined the physiological and morphological response patterns of plains cottonwood [ Populus deltoides subsp. monilifera (Aiton) Eck.] to acute water stress imposed by groundwater pumping. Between 3 and 27 July 1996, four large pumps were used to withdraw alluvial groundwater from a cottonwood forest along the South Platte River, near Denver, Colorado, USA. The study was designed as a stand-level, split-plot experiment with factorial treatments including two soil types (a gravel soil and a loam topsoil over gravel), two water table drawdown depths ( approximately 0.5 m and >1.0 m), and one water table control (no drawdown) per soil type. Measurements of water table depth, soil water potential (Psi(s)), predawn and midday shoot water potential (Psi(pd) and Psi(md)), and D/H (deuterium/hydrogen) ratios of different water sources were made in each of six 600-m(2) plots prior to, during, and immediately following pumping. Two additional plots were established and measured to examine the extent to which surface irrigation could be used to mitigate the effects of deep drawdown on P. deltoides for each soil type. Recovery of tree water status following pumping was evaluated by measuring stomatal conductance ( g(s)) and xylem water potential (Psi(xp)) on approximately hourly time steps from before dawn to mid-afternoon on 11 August 1996 in watered and unwatered, deep-drawdown plots on gravel soils. P. deltoides responded to abrupt alluvial water table decline with decreased shoot water potential followed by leaf mortality. Psi(pd) and percent leaf loss were significantly related to the magnitude of water table declines. The onset and course of these responses were influenced by short-term variability in surface and ground water levels, acting in concert with physiological and morphological adjustments. Decreases in Psi(pd) corresponded with increases in Psi(md), suggesting shoot water status improved in response to stomatal closure and crown dieback. Crown dieback caused by xylem cavitation likely occurred when Psi(pd) reached -0.4 to -0.8 MPa. The application of surface irrigation allowed trees to maintain favorable water status with little or no apparent cavitation, even in deep-drawdown plots. Two weeks after the partial canopy dieback and cessation of pumping, g(s) and Psi(xp) measurements indicated that water stress persisted in unwatered P. deltoides in deep-drawdown plots.     

Trace element concentrations in soil, corn leaves, and grain after cessation of biosolids applications

From 1974 to 1984, 543 Mg ha(-1) of biosolids were applied to portions of a land-reclamation site in Fulton County, IL. Soil organic C increased to 5.1% then decreased significantly (p < 0.01) to 3.8% following cessation of biosolids applications (1985-1997). Metal concentrations in amended soils (1995-1997) were not significantly different (p > 0.05) (Ni and Zn) or were significantly lower (p < 0.05) (6.4% for Cd and 8.4% for Cu) than concentrations from 1985-1987. For the same biosolids-amended fields, metal concentrations in corn (Zea mays L.) either remained the same (p > 0.05, grain Cu and Zn) or decreased (p < 0.05, grain Cd and Ni, leaf Cd, Cu, Ni, Zn) for plants grown in 1995-1997 compared with plants grown immediately following termination of biosolids applications (1985-1987). Biosolids application increased (p < 0.05) Cd and Zn concentrations in grain compared with unamended fields (0.01 to 0.10 mg kg(-1) for Cd and 23 to 28 mg kg(-1) for Zn) but had no effect (p > 0.05) on grain Ni concentrations. Biosolids reduced (p < 0.05) Cu concentration in grain compared with grain from unamended fields (1.9 to 1.5 mg kg(-1)). Biosolids increased (p < 0.05) Cd, Ni, and Zn concentrations in leaves compared with unamended fields (0.3 to 5.6 mg kg(-1) for Cd, 0.2 to 0.5 mg kg(-1) for Ni, and 32 to 87 mg kg(-1) for Zn), but had no significant effect (p > 0.05) on leaf Cu concentrations. Based on results from this field study, USEPA's Part 503 risk model overpredicted transfer of these metals from biosolids-amended soil to corn.     

Fuel derived pollutants and boating activity patterns in the Sea of Galilee

MTBE (Methyl tert-Butyl Ether) is a fuel additive that replaced lead as an antiknock compound in internal combustion motors. Few years after its introduction, detectable levels of MTBE were found in various water bodies. MTBE has a very low taste and odor threshold and is a potential carcinogen. Another group of fuel derived toxic compounds that has been detected in water bodies is BTEX (Benzene, Toluene, Ethylbenzene and Xylene). Boating activity and allochthonous contributions from watersheds are the major sources of fuel derived pollutants in lakes. Their concentrations in lakes thus vary as a function of boating activity intensity, lake surface area and depth, weather and wind regime, land-use in the watershed, etc. The Sea of Galilee (Lake Kinneret) is the only recreational lake in Israel and an important freshwater source. In the current study, a sampling campaign was conducted in order to quantify MTBE and BTEX concentrations in Lake Kinneret, its marinas and its main contributing streams. In addition, a boating-use survey was performed in order to estimate MTBE and BTEX contribution of recreational boating. The sampling campaign revealed that, as expected, MTBE concentrations were higher than BTEX, and that near shore (i.e., marina) concentrations were higher than in-lake concentrations. Despite the clear contribution from boating, high MTBE concentrations were found following a major inflow event in winter, indicating the importance of the allochthonous contribution. The contribution from boating during summer, as measured indirectly by in-lake concentrations, is likely underestimated due to enhanced MTBE volatilization due to strong winds and high temperatures. May–September was found to be the main recreational boating season, with continued boating year round. On average, a single boat is active 23 d/y, with 84% of the watercrafts being active only during weekends and holidays. The survey further indicated that boats stay in the lake for 4.5 h on average, which conforms to the unique winds regime that limits afternoon activity due to high winds, and have an average fuel consumption of 14 L/h. The annual load of MTBE and BTEX from recreational boating in Lake Kinneret was estimated at 4430 and 6220 kg/y respectively.