Temporal and spatial variability in coral recruitment on two Indonesian coral reefs: consistently lower recruitment to a degraded reef

Corals are the primary reef-building organisms, therefore it is key to understand their recruitment patterns for effective reef management. Coral recruitment rates and juvenile coral abundance were recorded in the Wakatobi National Marine Park, Indonesia, on two reefs (Sampela and Hoga) with different levels of environmental degradation (12.5 vs. 44 % coral cover with high and low sedimentation rates, respectively) to examine consistencies in recruitment patterns between years and seasons. Recruitment was measured on multiple panels at two sites on each reef (6–7 m depth) and cleared areas of natural reef. Although coral recruitment was twofold higher in 2008–2009 than in 2007–2008, and seasonal differences were identified, consistent significant differences in recruitment rates were found between the two reefs even though they are separated by only ~1.5 km. Recruitment rates and juvenile abundance were lower on the more degraded reef. These patterns are likely a consequence of differential pre- and post-settlement mortality as a result of the high sedimentation rates and degraded conditions and possibly reduced larval supply.     

Measuring settlement intensity of echinoderms on coral reefs

A pilot study was conducted at Davies Reef on the central Great Barrier Reef between 20 November 1991 and 20 January 1992 to assess the suitability of settlement collectors for measuring larval settlement rates of echinoderms on coral reefs. The collectors were deployed for two months during summer when many echinoderm species are known to spawn. A total of 657 newly settled echinoderms were recovered from just 47 collectors, each having a volume of just 0.005 m³ but with a utilisable surface area of about 1.44 m², indicating that competent-to-settle larvae were very abundant during the sampling period. Echinoids (7.8 sampler^-1) and ophiuroids (5.6 sampler^-1) were the most abundant groups on the collectors. Asteroids (0.2 sampler^-1) and crinoids (0.3 sampler^-1 were less common. The asteroids were all identified to species and included the crown-of-thorns starfish Acanthaster planci, Choriaster granulatus and Culcita novaeguineae. The newly settled echinoids could not be distinguished from each other but included Echinometra mathaei and Mespilia globulus. The abundance of each of the five different classes of echinoderms on the samplers was correlated with their abundance on the natural substratum. Significant spatial variability was found in settlement rates of echinoids over 1000s of metres and ophiuroids over 100s of metres, but not over smaller spatial scales. It is concluded that the collectors can provide a useful tool for monitoring spatial and temporal variability in settlement rates of echinoderms on coral reefs and for testing hypotheses about patterns of larval dispersal.     

Bioerosion of coral reefs by two Hawaiian parrotfishes: species, size differences and fishery implications

Parrotfishes can be significant bioeroders and sediment producers on coral reefs. We quantified the bioerosion rates of two similarly sized Hawaiian parrotfishes with two different feeding modes (Scarus rubroviolaceus—a scraper and Chlorurus perspicillatus—an excavator). The results showed that feeding modes did not affect bioerosion rates but that bioerosion rates were size dependent, with largest individuals (S. rubroviolaceus 45–54 cm FL) bioeroding up to 380 ± 67 kg ind⁻¹ year⁻¹. The size for onset of bioerosion capabilities for both species was 15 cm. Grazing by the two species consumed 60% of the carbonate production of the fore reef area, suggesting that large parrotfishes in Hawaii are ecologically important bioeroders. As individual large S. rubroviolaceus contributed disproportionately more to bioerosion and sediment production than the equivalent biomass of smaller conspecifics, management strategies designed to retain normal reef bioerosion rates should seek to preserve the historical size structure of S. rubroviolaceus populations and to especially protect the larger size classes.     

Diversity and community structure of symbiotic dinoflagellates from Caribbean coral reefs

A community ecology approach to the study of the most common group of zooxanthellae, dinoflagellates in the genus Symbiodinium, was applied to symbiotic invertebrate assemblages on coral reefs in the western Caribbean, off the Yucatan peninsula (Puerto Morelos, Mexico) and over 1000 km away in the northeastern Caribbean, at Lee Stocking Island, Bahamas. Sequence differences and intragenomic variation, as determined by denaturing gradient gel electrophoresis and sequencing of the internal transcribed spacer 2 (ITS 2) region, were used to classify these symbionts. Twenty-eight genetically distinct Symbiodinium types were identified, eleven of which were found in hosts from both Caribbean locations. A single symbiont population was detected in 72% of hosts from the Yucatan and 92% of hosts from the Bahamas. The reef-wide community distribution of these symbionts is dominated by a few types found in many different host taxa, while numerous rare types appear to have high specificity for a particular host species or genus. Clade or lineage A Symbiodinium spp. was restricted to compatible hosts located within 3-4 m of the surface, while Symbiodinium spp. types from other lineages displayed differences in vertical zonation correlated with ITS type but were independent of clade designation. A comparison of the symbiont types found in field-collected hosts with types previously cultured from these hosts indicates the existence of low density or "background"-symbiont populations and cryptic, potentially non-mutualistic types in some hosts.     

Parrotfish predation on cryptic sponges of Caribbean coral reefs

Some sponge species that live in crevices in the reef frame appear to be restricted to their cryptic habitat by predation. When cryptic sponges were excavated, on Guigalotupo reef, San Blas, Panama, exposing them to potential predators, they were eaten by fishes that are generally considered to be herbivores, primarily parrotfishes of the genus Sparisoma: S.aurofrenatum (Cuvier & Valenciennes), S.viride (Bonnaterre), and S.chrysopterum (Bloch & Schneider). Of the 9150 bites observed to be taken by these species during paired (i.e., with sponges versus without sponges) trials conducted in defined feeding areas during 1986, 1987, and 1988, 72% (i.e. 6581 bites) were on cryptic sponges, even though these were only offered during half of the total observation time and never constituted more than 7% of the cover of the feeding observation areas. Individual parrotfish returned over and over to take bites of the exposed cryptic sponges until they were entirely consumed. They vigorously chased each other away from the sponges, but exhibited no such defense of their usual algal foods. A total of 18 sponge species were tested. Of the cryptic and semi-cryptic sponge species tested, only one of six was rejected by the parrotfish. Two of these six sponge species were consistently consumed entirely, and two were consumed entirely whenever their surfaces were sliced off with a razor blade, demonstrating that these sponges concentrate defenses against predators in their surfaces. One semi-cryptic species and one semi-exposed species were fed upon, but not entirely consumed. By contrast, 11 of 12 of the exposed and semi-exposed species were rejected. Cryptic sponges grew out of their cavities in the reef only when protected by seasonally thick mats of macroalgae or by cages that excluded fish. Received: 10 January 1997 / Accepted: 4 February 1997     

The trophic status of herbivorous fishes on coral reefs

Dietary analyses of 17 species of nominally herbivorous fishes on the northern Great Barrier Reef were carried out to resolve the questions to what extent diet in nominally herbivorous reef fishes is dominated by living plant material and whether short-chain fatty acid profiles in the alimentary tract predict diet. The fishes included members of the families Acanthuridae, Scaridae and Kyphosidae. The analyses revealed consumption of a wide range of food resources including macroscopic algae, turfing algae, pelagic and planktonic animal matter, organic detritus and sediments. In only 7 of the 17 species was living algae the dominant dietary item. Gastrointestinal short-chain fatty acids (SCFA) profiles reflecting the fermentative activities of gut symbionts were used as a framework for the initial analysis of dietary patterns. The feeding patterns implied by the SCFA profiles were validated by direct observation of food material through gut content analysis. We identified four main trophic groupings differentiated by fermentation profiles and diet. These were: (1) species with low levels of SCFA in gut samples (mean mM 9.2ǂ.8) but a high proportion of isovalerate (mean 15.4%dž.7): Acanthurus nigricauda, A. olivaceus, Ctenochaetus striatus, Chlorurus microrhinos, C.sordidus, Scarus schlegeli; (2) species that fed on turfing, filamentous and small thallate algae and displayed moderate levels of SCFA (mean mM 21.9DŽ.9): Acanthurus nigricans, A.lineatus, Naso tuberosus; (3) species that fed on large thallate (macroscopic) algae with high levels of SCFA (mean mM 41.2Dž.5) with very low proportions of isovalerate (mean 0.5%ǂ.1): Kyphosus cinerascens, K.vaigiensis, Naso unicornis, Zebrasoma scopas; and (4) species with diets dominated by planktonic animal material with moderate levels of SCFA (mean mM 21.3ǃ.5): Naso annulatus, N. brevirostris, N. hexacanthus, N. vlamingii. We conclude that a wide range of dietary items are taken by the 17 nominal herbivores, and that dietary groupings do not reflect taxonomic relationships. There was evidence of convergence in feeding modes and diet between phylogenetically distinct taxa and divergence within particular lineages.     

Habitat biodiversity as a determinant of fish community structure on coral reefs

Increased habitat diversity is often predicted to promote the diversity of animal communities because a greater variety of habitats increases the opportunities for species to specialize on different resources and coexist. Although positive correlations between the diversities of habitat and associated animals are often observed, the underlying mechanisms are only now starting to emerge, and none have been tested specifically in the marine environment. Scleractinian corals constitute the primary habitat-forming organisms on coral reefs and, as such, play an important role in structuring associated reef fish communities. Using the same field experimental design in two geographic localities differing in regional fish species composition, we tested the effects of coral species richness and composition on the diversity, abundance, and structure of the local fish community. Richness of coral species overall had a positive effect on fish species richness but had no effect on total fish abundance or evenness. At both localities, certain individual coral species supported similar levels of fish diversity and abundance as the high coral richness treatments, suggesting that particular coral species are disproportionately important in promoting high local fish diversity. Furthermore, in both localities, different microhabitats (coral species) supported very different fish communities, indicating that most reef fish species distinguish habitat at the level of coral species. Fish communities colonizing treatments of higher coral species richness represented a combination of those inhabiting the constituent coral species. These findings suggest that mechanisms underlying habitat-animal interaction in the terrestrial environment also apply to marine systems and highlight the importance of coral diversity to local fish diversity. The loss of particular key coral species is likely to have a disproportionate impact on the biodiversity of associated fish communities.     

Diversity and stability of herbivorous fishes on coral reefs

Biodiversity may provide insurance against ecosystem collapse by stabilizing assemblages that perform particular ecological functions (the "portfolio effect"). However, the extent to which this occurs in nature and the importance of different mechanisms that generate portfolio effects remain controversial. On coral reefs, herbivory helps maintain coral dominated states, so volatility in levels of herbivory has important implications for reef ecosystems. Here, we used an extensive time series of abundances on 35 reefs of the Great Barrier Reef of Australia to quantify the strength of the portfolio effect for herbivorous fishes. Then, we disentangled the contributions of two mechanisms that underlie it (compensatory interactions and differential responses to environmental fluctuations ["response diversity"]) by fitting a community-dynamic model that explicitly includes terms for both mechanisms. We found that portfolio effects operate strongly in herbivorous fishes, as shown by nearly independent fluctuations in abundances over time. Moreover, we found strong evidence for high response diversity, with nearly independent responses to environmental fluctuations. In contrast, we found little evidence that the portfolio effect in this system was enhanced by compensatory ecological interactions. Our results show that portfolio effects are driven principally by response diversity for herbivorous fishes on coral reefs. We conclude that portfolio effects can be very strong in nature and that, for coral reefs in particular, response diversity may help maintain herbivory above the threshold levels that trigger regime shifts.     

The trophic status of herbivorous fishes on coral reefs

Estimates of feeding rates, alimentary tract structure and temporal patterns of food processing obtained from twelve species of nominally herbivorous fishes on the northern Great Barrier Reef were compared. These included members of the families Acanthuridae, Scaridae and Kyphosidae. Based on an analysis of diet and short-chain fatty acid (SCFA) profiles from a previous study we initially partitioned the twelve species into four dietary categories, as follows: (a) Category 1: herbivores with a diet of macroscopic brown algae and high SCFA profiles in the hindgut region (Naso unicornis, Kyphosus vaigiensis); (b) Category 2: herbivores feeding on turfing and filamentous red and green algae with moderate SCFA profiles in the hindgut region (N. tonganus, K. cinerascens, Zebrasoma scopas, Acanthurus lineatus); (c) Category 3: zooplankton feeders with moderate SCFA profiles (N. vlamingii, N. brevirostris); (d) Category 4: species feeding on detrital and sedimentary materials with low levels of SCFA (Chlorurus microrhinos, Scarus schlegeli, Ctenochaetus striatus, A. olivaceus). The purpose of this comparison was to determine whether measures of feeding activity, alimentary tract structure, and food processing were concordant with diet. A dichotomy in feeding rates was observed. Species with a diet of algae and zooplankton (categories 1–3) had slower feeding rates than those feeding on detrital aggregates and sediment (category 4). The pattern of food processing also followed the same dichotomy with species of categories 1–3 retaining food in the alimentary tract overnight and commencing the feeding day with substantial amounts of food in the intestine and hindgut. Category-4 species commenced the feeding day with empty alimentary tracts suggesting a rapid turnover of gut contents. Within the herbivorous and zooplankton-feeding species neither alimentary tract structure nor food processing mode were predicted by diet or SCFA profiles. A hindgut fermentation chamber was present in K. vaigiensis but not in N. unicornis, a species with high levels of SCFA in the hindgut region and a diet of brown macroscopic algae. In contrast N. vlamingii, with a diet dominated by animal matter, retained large amounts of food material in a hindgut chamber over the entire feeding cycle. In tropical perciform fishes, herbivory and fermentation are not associated with the alimentary tract structures that characterise herbivorous terrestrial vertebrates. Estimates of the abundance of the different groupings of nominally herbivorous fishes indicated that the dominant elements in the reef grazing and browsing fauna were consumers of detrital and sedimentary materials. These could not be classified as herbivores. Members of this group were dominant in all habitats investigated. Explicitly herbivorous taxa were a minority component in all habitats investigated.Communicated by G.F. Humphrey, Sydney     

Indications from photosynthetic components that iron is a limiting nutrient in primary producers on coral reefs

Because iron is not available generally in oxygenated sea water, it may be a limiting factor in marine primary production. This hypothesis was tested in the context of Davies Reef, Latitude 18°50′S (one of the coral reefs in the central region of the Great Barrier Reef system). Samples were collected for study in the period August, 1980 to March, 1981. Sea water around the reef contained ≦2x10^-6 M Fe, surface sediments from the reef contained 66±26 (1 SD) ppm total Fe, and interstitial water near the surface contained ≧5x10^-7 M Fe. Thus, Fe constituted a trace component of the reef environment, but limited Fe should be available to algae associated with the sediments. Specific biochemical analyses to test the Fe status of benthic photosynthetic organisms were carried out with a common blue-green alga, Phormidium sp., and a ubiquitous symbiotic dinoflagellate, Gymnodinium microadriaticum (zooxanthellae). The blue-green alga contained the electron transport protein, flavodoxin, which is found only in Fe-deficient organisms. Supporting evidence for Fe stress in this organism included chlorosis in the presence of plentiful biliprotein, and very low extractable photosynthetic cytochrome, c-553. The latter observations were shown to be the result of Fe deficiency in laboratory cultures of a blue-green alga, Synechococcus sp. These cultures showed that production of flavodoxin is not a universal response of algae to Fe stress, but that lowered cellular concentrations of Fe-containing proteins involved in photosynthesis probably is universal. The zooxanthellae from a soft coral, Sinularia sp., had three-fold lower total Fe and ferredoxin (an electron transport protein), than the same alga from a clam, Tridacna maxima. Thus, some algae in symbiotic associations may also suffer Fe-deficiency. It was concluded that the degree and extent of Fe-stress in primary producers on a coral reef may influence growth rates, biomass, and distribution of species.     

The basics of acidification: baseline variability of pH on Australian coral reefs

Ocean acidification is one of the key threats facing coral reef ecosystems, but there are few estimates of spatial and temporal variability in pH among reef habitats. The present study documents levels of spatial variability in pH among coral reef habitats (9 to 10), among locations separated by 100’s km of latitude and between east (Great Barrier Reef, GBR) and west (Ningaloo Reef) coasts of Australia. Differences were found in pH between inshore and offshore waters along Ningaloo Reef (means 8.45, 8.53, respectively). Replicate assessments here ranged from 8.22 to 8.64. On the GBR, the range of values over all habitats and replicates was 0.39 pH units (7.98 to 8.37). There were minor but significant differences of 0.05 pH units between 5 consecutive days for habitats on average. Highest pH was recorded in filamentous algal beds maintained by the damselfish Dischistodus perspicillatus. Lowest pH was found in water extracted from sand-dwelling goby holes. While there were marked changes in pH over a 48-h sampling period among 4 habitats at Lizard Island (GBR), there was little evidence of a diel trend. Understanding how pH varies at scales that are relevant to organisms that live on shallow coral reefs is crucial for the design and interpretation of experiments that test the effects on organisms of the changes in water chemistry predicted to affect oceans in the future.     

Observations on organic aggregates in the vicinity of coral reefs

The abundance of organic aggregates is reported for a variety of coral-reef sites and surrounding waters. There is no net increase of aggregates forming from dissolved organic matter and streaming off the reefs into the lagoons, though the organic components and the aeration of this water might be conducive to aggregate formation. Also, although the waters flowing from the surrounding oceans across the reefs and into the lagoons contribute organic components, the concentration of organic aggregates in the latter habitats is not in excess of quantities in surrounding oceanic waters.     

Mucous sheet formation on poritid corals: An evaluation of coral mucus as a nutrient source on reefs

The production, release, and subsequent consumption of coral mucus on reefs has been portrayed as a potential pathway for the transfer of coral and zooxanthellae production to other reef organisms. However, reported mucus production rates and analyses of nutritional value vary widely. Poritid corals provide a test system to measure mucus production because they produce mucous sheets which can be collected quantitatively. Fluid mucus and mucous sheets were collected fromPorites astreoides, P. furcata, P. divaricata during 1986 and 1987 on reefs in the San Blas Islands, Panama, La Parguera, Puerto Rico and the Florida Keys, USA. Mucus samples were collected from Indo-pacific poritids (P. australiensis, P. lutea, P. lobata, andP. murrayensis) on the Great Barrier Reef during 1985. Biochemical analyses of the fluid mucous secretions, and the derivative mucous sheet, indicate that the mucus is primarily a carbohydrateprotein complex.Porites fluid mucus had a mean caloric content of 4.7 cal mg^–1 ash-free dry weight (AFDW), while mucous sheets contained 3.5 cal mg^–1 AFDW. Sixty-eight percent of the mucous sheet was ash, while fluid mucus was 22% ash. The high ash and low organic contents suggest that mucous sheets have a low nutritional value. C:N ratios varied (range 6.9 to 13.7 for fluid mucus, and 4.8 to 5.9 for mucous sheets), but were similar to typical C:N ratios for marine organisms. Bacterial numbers and chlorophyll a concentrations were higher on mucous sheets than in the surrounding water. Although bacteria aggregate on mucous sheets, bacteria accounted for less than 0.1% of the carbon and nitrogen content of the mucous sheet. Lower C:N ratios in aged mucus, i.e. mucous sheets versus fluid mucus, were attributed to a loss of carbon rather than an increase in nitrogen. Mucous sheet production accounts for a small proportion (< 2% gross photosynthesis) of published values for coral production. In the San Blas Islands, Panama,P. astreoides produced mucous sheets at a rate of 1.5 g C m^–2 y^–1 and 0.3 g N m^–2 y^–1.P. astreoides andP. furcata produced mucous sheets with a lunar periodicity and may provide approximately monthly pulses of carbon and nitrogen to the reef food-web. However, the low annual production rates suggest that mucous sheets make a small contribution to overall energy flow on coral reefs.     

The impact of exploiting grazers (Scaridae) on the dynamics of Caribbean coral reefs.

Coral reefs provide a number of ecosystem services including coastal defense from storms, the generation of building materials, and fisheries. It is increasingly clear that the management of reef resources requires an ecosystem approach in which extractive activities are weighed against the needs of the ecosystem and its functions rather than solely those of the fishery. Here, I use a spatially explicit simulation model of a Caribbean coral reef to examine the ecosystem requirements for grazing which is primarily conducted by parrotfishes (Scaridae). The model allows the impact of fishing grazers to be assessed in the wider context of other ecosystem processes including coral-algal competition, hurricanes, and mass extinction of the herbivorous urchin Diadema antillarum. Using a new analytical model of scarid grazing, it is estimated that parrotfishes can only maintain between 10% and 30% of a structurally complex forereef in a grazed state. Predictions from this grazing model were then incorporated into a broader simulation model of the ecosystem. Simulations predict that scarid grazing is unable to maintain high levels of coral cover (> or = 30%) when severe hurricanes occur on a decadal basis, such as occurs in parts of the northern Caribbean. However, reefs can withstand such intense disturbance when grazing is undertaken by both scarids and the urchin Diadema. Scarid grazing is predicted to allow recovery from hurricanes when their incidence falls to 20 years or less (e.g., most of Central and South America). Sensitivity analyses revealed that scarid grazing had the most acute impact on model behavior, and depletion led to the emergence of a stable, algal-dominated community state. Under conditions of heavy grazer depletion, coral cover was predicted to decline rapidly from an initial level of 30% to less than 1% within 40 years, even when hurricane frequency was low at 60 years. Depleted grazers caused a population bottleneck in juvenile corals in which algal overgrowth caused elevated levels of postsettlement mortality and resulted in a bimodal distribution of coral sizes. Several new hypotheses were generated including a region-wide change in the spatial heterogeneity of coral reefs following extinction of Diadema. The management of parrotfishes on Caribbean reefs is usually approached implicitly through no-take marine reserves. The model predicts that depletion of grazers in nonreserve areas can severely limit coral accretion. Other studies have shown that low coral accretion can reduce the structural complexity and therefore quality of the reef habitat for many organisms. A speculative yet rational inference from the model is that failure to manage scarid populations outside reserves will have a profoundly negative impact on the functioning of the reserve system and status of non-reserve reefs.     

Intensive fishing of marine consumers causes a dramatic shift in the benthic habitat on temperate rocky reefs

Intensive fishing can cause dramatic, long-lasting shifts in benthic habitat. This study used three approaches to test whether overharvesting of blacklip abalone (Haliotis rubra) can cause a shift in benthic habitat to a configuration that is unsuitable for abalone, on the east coast of Tasmania, Australia. After 18 months of removing abalone from rocks, encrusting red algae (ERA) became overgrown by filamentous and foliose algae, sessile invertebrates and accumulated sediment. The differences in the community composition between locations, sites nested within locations and rocks were minor. Throughout the study, abalone were largely associated with areas of rock covered in ERA but avoided other habitats. A transplant experiment demonstrated that abalone preferred areas of rock covered in ERA but move away from overgrown rocks. These results suggest overharvesting of abalone results in a shift to benthic habitat poorly preferred by abalone. This could form a positive feedback loop that limits recovery of abalone populations and ERA.     

The ties that bind: Inter-clonal cooperation may help a fragile coral dominate shallow high-energy reefs

In Belize, shallow fore-reef buttresses are dominated byAgaricia tenuifolia Dana. The ecological importance of this fragile coral in such a high-energy environment may be explained in part by an unusual cooperative interaction between adjacent clones ofA. tenuifolia. The shallow buttresses are often composed primarily of many clones ofA. tenuifolia growing in close proximity. Surveys conducted at Carrie Bow Cay, Belize, in 1986 and 1987 showed that intraspecific contacts between different clones are common and occur far more frequently than interspecific encounters with other sessile taxa. In contrast to many other corals, contacts between non-clonemates ofA. tenuifolia do not result in competitive interactions, tissue bleaching or death, or significantly altered patterns of colony growth. Instead, inter-clonal contact stimulates localized morphological changes in the skeletons of both corals directly beneath the contact interface, which tend to anchor the two corals against each other, making them more resistant to breakage and detachment. By mechanically stabilizing clusters of otherwise fragile corals, these cooperative interactions potentially enhance the long-term survivorship and hence the fitness of interactingA. tenuifolia clones.The views expressed here are those of the author and do not necessarily reflect those of the Office of Technology Assessment     

Estimating the footprint of pollution on coral reefs with models of species turnover

Ecological communities typically change along gradients of human impact, although it is difficult to estimate the footprint of impacts for diffuse threats such as pollution. We developed a joint model (i.e., one that includes multiple species and their interactions with each other and environmental covariates) of benthic habitats on lagoonal coral reefs and used it to infer change in benthic composition along a gradient of distance from logging operations. The model estimated both changes in abundances of benthic groups and their compositional turnover, a type of beta diversity. We used the model to predict the footprint of turbidity impacts from past and recent logging. Benthic communities far from logging were dominated by branching corals, whereas communities close to logging had higher cover of dead coral, massive corals, and soft sediment. Recent impacts were predicted to be small relative to the extensive impacts of past logging because recent logging has occurred far from lagoonal reefs. Our model can be used more generally to estimate the footprint of human impacts on ecosystems and evaluate the benefits of conservation actions for ecosystems.     

Appraisal of visual assessments of habitat complexity and benthic composition on coral reefs

Visual assessments of topographic habitat structure and benthos on coral reefs were appraised using quantitative data collected from 16 replicate surveys within each of 21 sites on Seychelles reefs. Results from visual assessments of reef benthos were similar to those obtained using techniques frequently used to assess benthic complexity and composition. Visual estimates of habitat topography were correlated with rugosity, reef height and holes of 10–70 cm diameter, whilst visual estimates of benthic composition were very similar to those obtained from line intercept transects. Visual estimates of topography correlated strongly with species richness of fish communities and explained 42% of the variation in these data. The relationship between visual estimates of topography and species richness is strongest with fish 10–30 cm total length (TL), abundance of fish within this size category also correlating positively with topographic visual assessments. Visual techniques are prone to observer bias, however with regular training they can be used to quickly provide a reliable and effective means of assessing habitat complexity and benthos on coral reefs.