Influence of environmental variables on the fish fauna of the deeper waters of a large Australian estuary

Fish were collected by gill nets from the deeper waters of the Entrance Channel, basins and rivers of the large Peel-Harvey estuarine system (south-western Australia) in the wet (June to November) and dry (December to May) periods between August 1979 and July 1981. Simple-regression analysis showed that the number of species, abundance and biomass of fish in the rivers rose with increases in the salinity and temperature of both the surface and bottom of the water column. No such significant correlations were found in the Entrance Channel andbasins (Peel Inlet and Harvey Estuary), where salinity changes were far less marked. The number of species at sites throughout the estuary was inversely correlated with distance from the estuary mouth. Multiple-regression equations showed that, compared with the other environmental variables tested, bottom salinity had a greater influence on the nunber of species and abundance both in the rivers and in the system as a whole. These results indicate that salinity has a greater effect on the fauna in the deeper waters than in the shallows (cf. Loneragan et al., 1986). The larger fish which characterise the deeper waters may thus be less tolerant to low salinities than the smaller fish typically found in the shallows. Both classification and ordination separated the faunal composition of the rivers from those of the Entrance Channel and basins. The fauna of the two narrow and deeper sites in the rivers separated into wet- and dry-period components. Differences between the faunal composition of the riverine regions and those of the Entrance Channel and basins have been related to the much more variable and lower minimum salinities in the rivers. Species characteristic of the rivers included Amniataba caudavittatus, which is estuarine sensu stricto in south-western Australia, the semianadromous Nematalosa vlaminghi and the highly euryhaline Mugil cephalus. The indicator species for the Entrance Channel and basins were all marine species (Cnidoglanis macrocephalus, Hyporhamphus melanochir, Gerres subfasciatus and Pomatomus saltator).     

Variations in benthic community structure in a sub-tropical estuary

Abundances of macroinfaunal invertebrates in sand dollar (Dendraster excentricus) beds and in adjacent areas free of sand dollars were studied at 10 intertidal sites in the Pacific Northwest region of the USA and Canada. Each site was sampled once in late summer of 1977. There were no significant differences in overall diversity of species between the beds and adjacent areas; nor did cluster analysis indicate a sand dollar bed community. However, a polychaete (Armandia brevis) was significantly more abundant inside the beds than just outside them. Conversely, in comparison to the beds, adjacent regions contained significantly more specimens of the following species: a bivalve (Transennella tantilla), several tubicolous crustaceans (Corophium spp., Ampelisca agassizi, and Leptochelia savignyi) and two polychaetes (Glycinde polygnatha and Malacoceros arenicola). Sediment characteristics at each study site were not correlated with the presence or absence of sand dollars; moreover, a comparison among the 10 sites revealed no sediment characteristics typical of sand dollar beds. At most of the sites, significantly fewer tube-building invertebrates occurred inside sand dollar beds than outside. The discussion considers the possibility that mechanical disturbance by the sand dollars tends to exclude some macroinvertebrates (especially tubicolous ones) from sand dollar beds.     

Spatial and seasonal differences in the fish fauna in the shallows of a large Australian estuary

Samples of fish were collected by beach seine throughout the shallow waters of the large Peel-Harvey estuarine system (south-western Australia) in the wet (June to November) and dry periods (December to May) between August 1979 and July 1981. The number of species, density and biomass declined with distance from the estuary mouth and rose with increasing temperature and salinity. Both classification and ordination distinguished the faunal composition of the saline reaches of the rivers from that of the narrow Entrance Channel and two large basins (Peel Inlet and Harvey Estuary). Classification also separated the fauna of the riverine group into wet- and dry-period components, and divided samples taken in the Entrance Channel from those in the basins. Differences between the faunal composition of the Peel Inlet and its tributary rivers were related to differences in salinity regime. The riverine fauna was subjected to much more variable and lower minimum salinities. Species characteristic of the rivers included teleosts such as Atherinosoma wallacei and Amniataba caudavittatus, which are estuarine sensu stricto in southwestern Australia, the semi-anadromous Nematalosa vlaminghi and juveniles of the marine Mugil cephalus. The species diagnostic of the wet periods in the rivers were the estuarine species A. wallacei and Favonigobius suppositus, while the dry periods were characterised by the marine species Atherinomorus ogilbyi and Sillago schomburgkii. Marine species also characterised the Entrance Channel (Favonigobius lateralis, Sillago bassensis), whereas the indicators in Peel Inlet and Harvey Estuary were Hyporhamphus regularis and Apogon rueppellii, both of which can pass through the whole of their life cycle in estuarine as well as marine environments.     

Seasonal and spatial changes in the larval fish fauna within a large temperate Australian estuary

A total of 66814 fish larvae, representing 37 families and 74 species, were collected in samples taken monthly between January 1986 and April 1987 from 13 sites located at frequent intervals throughout the large Swan Estuary in south-western Australia. The Gobiidae was the most abundant family, comprising 88.2% of the total number of larvae, followed by the Clupeidae (3.4%), Engraulididae (2.9%) and Blenniidae (1.0%). The most abundant species were Pseudogobius olorum (53.3%), Arenigobius bifrenatus (31.2%) and Engraulis australis (2.9%). Abundance of fish larvae in the lower, middle and upper regions of the estuary each reached a maximum between mid-spring and early summer, 2 to 4 mo before the attainment of maximum temperatures. Larvae of species such as Nematalosa vlaminghi and Apogon rueppellii were collected only between November and February, whereas those of others such as P. olorum, E. australis and Leptatherina wallacei were present over many months. The times and locations of capture of larvae have been related to the distribution and breeding periods of the adults of these species. The mean monthly number of species was far greater in the lower than upper estuary (14.7 vs 2.7), whereas the reverse was true for mean monthly concentration (42 vs 197 larvae per 100 m³). Classification, using the abundance of each of the 74 species recorded at the different sites, showed that the composition of the larval fish fauna in the lower, middle and upper estuary differed markedly from each other. Most larvae caught in the lower estuary belonged to marine species, whereas those in the upper estuary almost exclusively represented species that spawn within the estuary. The fact that the larvae of the 59 species of marine teleosts recorded during this study were restricted mainly to the lower estuary, and yet contributed only 6.2% to the total numbers for the whole estuary, helps to account for the relatively high species diversity in this region. The lack of penetration of many of these larvae beyond the first 12.5 km of the estuary presumably reflects the weak tidal effect in the wide basins of the middle estuary and saline regions of the tributary rivers. The larvae of the 13 teleosts that typically spawn within the estuary contributed 93.8% to the total numbers of larvae. Most of these estuarine-spawned larvae belong to teleosts that deposit demersal eggs and/or exhibit parental care (egg-guarding and oral and pouch-brooding), characteristics which would maximize their chances of retention within the estuary.     

Vertical community structure and ontogenetic distribution of chaetognaths in upper pelagic waters of the Eastern Mediterranean

The vertical distribution of chaetognaths and their developmental stages were investigated in the pelagic waters (0 to 500 m) of the Eastern Mediterranean Sea. Twenty vertical hauls were taken during autumn 1991 in the Ionian, Cretan, Levantine and Rhodes Seas. The chaetognaths Sagitta bipunctata and S. enflata had the same median depth distributions, which differed from those of S. minima, S. serratodentata, S. lyra, Krohnitta subtilis, and S. decipiens, while S. hexaptera occurred only sporadically. S. bipunctata and S. enflata were mainly restricted to <50 m, and while their distributions co-occurred their stage composition differed. The remaining species took up progressively deeper positions in the water column. Ontogenetic vertical distributions, with the older stages occurring at greater depth, were only observed for the mesopelagic species S. lyra and S. decipiens. Diurnal vertical migration was not detected in any of the species nor in their developmental stages.     

Multiple determinants of community structure in shallow marsh habitats,Cape Fear River estuary,North Carolina,USA

The nekton of tidal creeks was studied at 17 sampling localities from September 1977 through August 1978, in the Cape Fear River estuary, North Carolina, USA. Prior to these dates, collections were made at 9 stations beginning in January 1977; these data were used to supplement conclusions drawn from the larger effort. Species recruited from the ocean utilized marsh habitats only temporarily and dominated the catches with over 70% of the total abundance. Their distribution was influenced by salinity gradients and to a lesser extent by substrate characteristics. In addition, temporal habitat partitioning with associated size differences of related species played an important role in structuring marsh nekton communities. A clearly defined ecotone was associated with the mesohaline-polyhaline transition zone, in slainities between 14 and 21 S. Numerous marine stenohaline forms were restricted to salinities above 16 S, thus increasing species richness in high salinity marshes. Despite differences in freshwater flows in 1977 and 1978, major features of the various marsh communities (species associations and relative abundances) exhibited little change throughout the Cape Fear estuary, indicating that these communities were relatively persistent in time. Standing crops for ocean-spawned species at the end of the growing season indicated that considerable annual export in the form of living biomass of fish and shellfish takes place from the marshes. Since most individuals of these species return to the ocean in the fall, an important energy link between the marshes and nearshore marine environment is demonstrated.     

Diets of piscivorous fishes in a tropical Australian estuary,with special reference to predation on penaeid prawns

The diets of fish from the tropical Embley Estuary in the eastern Gulf of Carpentaria, Australia, were analysed with particular reference to piscivory and predation on juveniles of commercially important penaeid prawns from October 1986 until July 1988. Of the 77 species caught, 52 were piscivorous, and of these 37 ate penaeid prawns. The most numerous piscivores wereScomberoides commersonianus, Arius proximus, Lates calcarifer, Polydactylus sheridani andRhizoprionodon acutus, the first four of which accounted for over 90% of all prawns eaten. Twenty species are commercially important species of prawns. The proportions of penaeids in the diets varied seasonally, according to the density of penaeids in the estuary. The proportion was highest during the pre-wet period (November) and lowest during the dry period (July–August). Predation on prawns was highest in the lower and middle reaches of the river. Estimates of the rates of predation on the two most common juvenile commercial prawns,Penaeus merguiensis andP. semisulcatus, are presented and discussed.     

Community structure,density and standing crop of fishes in a subtropical Australian mangrove area

The fishes occurring in a subtropical mangrove (Avicennia marina) area in Moreton Bay, Australia, were studied for one year (November 1987 to November 1988, inclusive). Fishes within the mangroves were sampled using a block net, whilst those in adjacent waters were sampled using seine and gill nets. Forty six percent of the species, 75% of the number of fishes and 94% of the biomass taken during the study (all methods combined) were of direct importance to regional fisheries. The fish community utilising the habitat within the mangrove forest differed from that occurring in adjacent waters in terms of density, standing crop, species composition and diversity-index values. Standing-crop estimates for the fishes occurring within the mangroves (study period mean ± SD = 25.3 ± 20.4 g m^–2) were amongst the highest recorded values for estuarine areas whilst those for adjacent waters (2.9±2.3 g m^–2) were comparable to those of other estuarine studies.     

Lunar influence on distribution of a calanoid copepod in the water column of a shallow,temperate estuary

Moonlight had a significant influence on the distribution of the copepodPseudodiaptomus hessei in the water column. Copepod samples were taken between March 1986 and March 1987 in the Sundays River estuary. South Africa. Late copepodid stages and adults showed vertical differences in abundance on moonlit nights, with more animals in bottom waters, but not on dark nights. Numbers of adults present in the water column were markedly lower on full moon nights compared with new moon nights. The strongest decrease in abundance was displayed by ovigerous females. These observed distribution patterns support published predation hypotheses.     

Hydrography and distribution dynamics of larval and juvenile fishes in the coastal waters of the Tanshui River estuary,Taiwan, with reference to estuarine larval transport

Distribution dynamics of fish larvae and juveniles in the coastal waters of the Tanshui River, Taiwan was studied fortnightly using surface horizontal tows with a larval net in daytime during the period from early April through early June 1991. Environmental factors, including water temperature, salinity, dissolved oxygen, pH, transparency and depth at sampling stations, were also monitored. A total of 10737 fish eggs and 1387 individuals, representing 43 families and 93 species, was collected during five cruises from 12 stations in the coastal waters. Most fish were estuarine-dependent marine species. Liza macrolepis, Ambassis gymnocephalus, Terapon jarbua, Mullidae and Gobiidae were the most dominant, making up 64.7% of the total catch. Early life stages, including egg, preflexion, flexion and postflexion larvae were abundant in surface samples. However, yolk-sac larvae were absent in the surface water, probably due to an ontogenetic behavioral shift as a consequence of a change in specific weight during early development. The species composition of fish larvae and juveniles was related to the microhabitats found in the coastal waters. The physico-chemical conditions, along with ontogenetic behavior, played an important role in larval fish distribution in the coastal waters.     

Ecology and distribution of the benthic fauna in the shallow waters of the Red Sea

Approximately 500 animal species and plants are listed as being the most typical for the infratidal and shallow subtidal benthic fauna of the Red Sea. Most of them are divided into communities typical for various soft and hard substrata, and at different water depths. The oceanographic conditions and the development of several of the communities are discussed in general terms.Supported partly by grants 62558-4556 and F 671052 67C 0043 of the US Office of Naval Research and Grant SFC-7-0074 of the Smithsonian Institution.     

Animal-sediment relations and community analysis of a Florida estuary

Five species assemblages of the intertidal infauna of Old Tampa Bay, Florida, USA are identified. Two assemblages are judged to constitute distinct communities, while a third is shown to be an interdigitation of the two communities. Dominance by on species is the prevalent pattern within the assemblages. Numbers of deposit feeders are found to be inversely correlated to that of filter feeders, and both trophic types are found to be correlated to the sediment parameters of median grain size, sorting and skewness. Three transects with three stations each were established along the south side of Courtney Campbell Causeway in Tampa Bay, Florida. A faunal sample (0.4 m²), a sediment sample, and a water sample were taken at each station in September, December, and March of 1968/1969. Sediment samples were wet-seived. Animal samples were reduced to numbers of organisms and biomass per species. Trellis diagrams and correlation tests were generated. Support is shown for the trophic group-amensalims hypothesis, however, the silt-clay fraction is apparently of lesser importance to deposit feeders in Florida sediments than in Buzzards Bay sediments. An attempt is made to relate an analysis of the optimal grain size for filter feeders to the trophic group-amensalism hypothesis. A view of communities as abstractions from continua is more realistic than communities as discrete units.     

湖北省湖泊大型底栖动物群落结构及水质生物学评价

大型底栖动物是湖泊生态系统的重要生物类群,在生态系统物质循环和能量流动中起着重要作用。底栖动物具有生命周期长、迁移能力较弱、对环境变化反应敏感等特点,可有效指示湖泊生态系统的健康状况。湖北省是我国淡水湖泊分布最密集的区域之一,湖泊总面积为3025 km2。近年来,伴随着工农业、养殖业及城市化的快速发展,富营养化已成为本地区湖泊面临的一个主要环境问题,并可能直接影响大型底栖动物的群落结构。目前关于本地区湖泊大型底栖动物群落的研究还较少,为此本研究对湖北省27个浅水湖泊底栖动物进行了调查,并对水质状况进行生物学评价。共采集到底栖动物40种,隶属于4门7纲18科,其中寡毛类5种,摇蚊幼虫16种,软体动物双壳类4种、腹足类8种。霍甫水丝蚓（Limnodrilus hoffmeisteri）、苏氏尾鳃蚓（Branchiura sowerbyi）、花翅前突摇蚊（Procladius choreus）、中国长足摇蚊（Tanypus chinensis）、多巴小摇蚊（Microchironomus tabarui）及铜锈环棱螺（Bellamya aeruginosa）是本地区湖泊最常见的种类。所调查湖泊底栖动物平均密度为32~1243 ind·m-2,其中12个湖泊密度低于200 ind·m-2,摇蚊幼虫和寡毛类对密度的贡献较大,以摇蚊幼虫占优势的湖泊有19个。底栖动物平均生物量为0.034~460.7 g·m-2,生物量低于50 g·m-2的湖泊数量最多（19个）,软体动物占优势的湖泊有16个,摇蚊幼虫和寡毛类占优势的湖泊数量共11个。各湖泊底栖动物物种数为3~14种,Margalef指数为0.71~2.33,Simpson指数为0.69~0.85,Shannon-Wiener为0.78~2.13,Spearman相关性分析结果显示物种丰富度和三种多样性指数与湖泊面积呈显著正相关。BI（Hilsenhoff生物指数）评价结果显示共11个湖泊为一般和轻度污染（6.01~7.44）,中度污染湖泊数量为13个（7.57~8.47）,长湖（8.52）、上津湖（8.65）和玉湖（8.50）处于重污染状态。     

Species composition,community structure and zoogeography of fishes of mangrove estuaries in the Solomon Islands

Mangrove estuaries in the Solomon Islands are well developed, but are small and isolated from each other by extensive fringing coral reef lagoons. A total of 136 species of fish were recorded from 13 estuaries (6 estuaries in Kolombangara, 3 in New Georgia, 3 in Rendova and 1 in the Florida Group); none contained more than 50 species. Sampling took place during five 3 wk expeditions from 1986 to 1988. The mean biomass of 11.60 g m^–2 is comparable with that of similar estuaries in northern Australia. Cluster-analysis revealed two patterns of fish species composition. The first group, in which Gobiidae were the most numerous taxon, inhabited soft, muddy-bottom estuaries. The second group, dominated by Pomacentridae, lived in hard-bottom, log-strewn estuaries. The role of the estuaries as nursery grounds for coral reef species was assessed and found to be insignificant, but they are used as feeding grounds by mobile piscivorous species. The species composition of Solomon Island estuaries was compared with that of other Indo-Pacific estuaries. No endemic species were found and the fauna is typical of such mangrove systems throughout the region. However, several taxa that are common in Australia or New Guinea were not found, notably Ariidae, Centropomidae,Pomadasys, and Sciaenidae. These absentees, and the fish fauna as a whole, are discussed in relation to the position of the Solomon Islands at the western edge of the Pacific Plate, the effects of deep-ocean trenches, the recent geological origin of the islands, and possible methods of colonisation from nearby mangroves in Australia and New Guinea. The importance of larval durations and dispersal to colonisation are discussed in relation to oceanic circulation patterns in the Solomon Sea.     

Species-specific effect of macrobenthic assemblages on meiobenthos and nematode community structure in shallow sandy sediments

Three functionally different macrofaunal species (the filter- and/or surface deposit-feeding polychaete Hediste diversicolor, and the suspension-feeding bivalves Mya arenaria and Cerastoderma glaucum) were introduced as single- and two-species treatments into microcosms containing sandy sediment with a natural meiofaunal community. H. diversicolor is a burrowing species building a system of galleries, C. glaucum lives actively near the sediment surface acting as a biodiffuser and M. arenaria buries deeply and leads a sessile lifestyle. It is shown that H. diversicolor extended the vertical distribution of meiofauna into deeper sediment layers compared to the control and non-Hediste treatments. The response of the nematode community varied significantly among treatments and was dependant on the macrobenthic species composition but not on the species number. Nematode assemblages in all treatments with the polychaete, both in monoculture and with either bivalve, differed significantly from those recorded in other treatments and were more similar than replicates within any other single treatment. H. diversicolor also appeared to have stimulated nematode species diversity. The present study demonstrated that the impact of macrobenthic assemblages on meiofauna is not a simple summation of individual species effects but is species specific.     

Eddy diffusivity: a single dispersion analysis of high resolution drifters in a tidal shallow estuary

In an estuary, mixing and dispersion resulting from turbulence and small scale fluctuation has strong spatio-temporal variability which cannot be resolved in conventional hydrodynamic models while some models employs parameterizations large water bodies. This paper presents small scale diffusivity estimates from high resolution drifters sampled at 10 Hz for periods of about 4 h to resolve turbulence and shear diffusivity within a tidal shallow estuary (depth <3 m). Taylor’s diffusion theorem forms the basis of a first order estimate for the diffusivity scale. Diffusivity varied between 0.001 and 0.02 m²/s during the flood tide experiment. The diffusivity showed strong dependence (R² > 0.9) on the horizontal mean velocity within the channel. Enhanced diffusivity caused by shear dispersion resulting from the interaction of large scale flow with the boundary geometries was observed. Turbulence within the shallow channel showed some similarities with the boundary layer flow which include consistency with slope of 5/3 predicted by Kolmogorov’s similarity hypothesis within the inertial subrange. The diffusivities scale locally by 4/3 power law following Okubo’s scaling and the length scale scales as 3/2 power law of the time scale. The diffusivity scaling herein suggests that the modelling of small scale mixing within tidal shallow estuaries can be approached from classical turbulence scaling upon identifying pertinent parameters.     

Distribution and community structure of midwater fishes in relation to the subtropical convergence off eastern Tasmania,Australia

Midwater fishes were sampled at night to a depth of 400 m in oceanic waters east of Tasmania, Australia, in May/June of 1992, 1993 and 1994. We examined whether there were differences in the distribution and density of these fishes in relation to the subtropical convergence (STC) separating East Australia Current (EAC) water from subantarctic water (SAW) to the south. A total of 23999 fishes from 107 taxa and 43 families were identified. Four new records were identified from the study area. Myctophids and stomiatoids were the main fish taxa captured. We found no evidence of increased density of the combined fish catch in any particular area. However, differences between areas in the density of individual species were noted, although no species was confined to any one area. Ceratoscopelus warmingi, Lobianchia dofleini and Vinciguerria spp. were most abundant in the EAC, whereas Lampichthys procerus was most abundant in the SAW. Only Diaphus danae was found in significantly higher numbers in the STC. Multivariate analysis revealed that community structure in the EAC was significantly different from that of the SAW but not from the STC. Further, when separated by depth, the shallow EAC group was significantly different in all group comparisons bar that with the shallow STC. Our data indicated that the thin EAC layer above 200 m could be distinguished by its fauna from the SAW. However, we could not detect a separate community in the STC. We conclude, therefore, that the STC is not an area of increased micronekton abundance, nor does it contain a distinct community, during the Australian autumn/winter.     

Macrozoobenthic community structure in the Ría de Foz,an intertidal estuary (Galicia,Northwest Spain)

The community structure of the macrobenthic (>1 mm) fauna of an intertidal soft-bottom estuary, the Ría de Foz (Galicia, Northwest Spain) was investigated on 99 occasions during June, September and December 1984 and March 1985. The infaunal data were subjected to classification and ordination techniques. The analyses indicated that sediment characteristics (grain size, percentage silt-clay and organic-matter content) and tidal height are the most important factors governing the distribution and abundance of the intertidal communities. Three faunal assemblages were identified and examined in terms of species dominance, constancy and fidelity. In the clean sands of the outer estuary two main assemblages were distinguished; one, corresponding to the boreal LusitanianTellina community, inhabited the middle and lower tidal levels; the other, typical of a biocoenosis of sands and slightly muddy mediolittoral sands, inhabited the upper tidal level. The third benthic assemblage occupied the muddy sands and mud of the inner estuary and displayed some features in common with theCardium edule-Scrobicularia community described by Thorson.     

Population structure of the giant tiger prawn Penaeus monodon in Australian waters, determined using microsatellite markers

 We describe three highly polymorphic microsatellite loci which have been isolated from the giant tiger prawn Penaeus monodon. The number of alleles present among 312 samples at the loci Pmo9, Pmo25 and Pmo27 were 84, 34 and 35, respectively, with heterozygosities all >90%. Analyses of the distribution of length variation at three microsatellite loci among five Australian P. monodon populations revealed strong differentiation between populations from the west and those from the northern and eastern coasts. Tests for population differentiation (F st) values and an analogous measure for microsatellite loci (R st) all demonstrated that Western Australian P. monodon are a separate genetic stock which exhibits reduced genetic variation relative to the other populations. Reduced variability is consistent with a recent population bottleneck or colonization by a small founding population from the east when sea links between Indonesia, New Guinea and Australia were re-established following the last ice age. The results of this study are in agreement with previous surveys of P. monodon conducted with allozymes and mtDNA. Received: 18 December 1998 / Accepted: 27 August 1999