The influence of hydrodynamic processes on zooplankton transport and distributions in the North Western Mediterranean: Estimates from a Lagrangian model

A Lagrangian module has been developed and coupled with the 3D circulation model Symphonie to study the influence of hydrodynamic processes on zooplankton transport and distributions in the North Western Mediterranean (NWM). Individuals are released every 3 days from March to August 2001 in two initial areas: around the DYFAMED sampling station in the central Ligurian Sea and in the Rhône river plume. Then the individuals are tracked for 40 days either as passive particles or with a simple diel vertical migration (DVM) pattern. The simulations suggest strong seasonal patterns in the distributions of the individuals released around the DYFAMED sampling station. Individuals spread all over the NWM basin after 40 days but different patterns occur depending on the season, the initial depths of release and the capacity of DVM. Offshore-shelf transport only occurs in April and May with particles ending up in the Gulf of Lions (GoL) in low concentrations. In other months, the Northern Current (NC) can be considered as a barrier for particles entering the GoL from the offshore sea. A quarter to a half of passive individuals released in the Rhône river plume remain in the GoL. The rest is transported by the NC towards the Catalan Sea. Applying a simple DVM scheme does not increase the retention of particles on the shelf.     

Zooplankton population model coupled to a biogeochemical model of the North Western Mediterranean Sea ecosystem

A stage structured population (SSP) model based on Fennel's [Fennel, W., 2001. Modelling copepods with links to circulation models. Journal of Plankton Research, 23, 1217–1232] equations is applied to Centropages typicus (Kröyer), a dominant copepod species of the North Western Mediterranean Sea (NWMS) and a prey of small pelagic fish. The model considers five groups of stages and development rates are represented by a mechanistic formulation depending on individual specific growth in each stage. Individual growth is calculated from the individual energy budget depending on food availability and temperature.     

Seasonal Fluctuations in the Nutritional Value of Particulate Organic Matter in A Lagoon

Water samples were collected on a fortnightly basis in the lagoon of S. Gilla (Sardinia, Mediterranean Sea) in order to study seasonal nutritional fluctuations of particulate organic matter. the lagoon is characterized by high quantities of suspended matter throughout the year. Thermohaline conditions had no effect on particulate matter quantity and composition, but the quantity as well as quality of suspended particles was drastically affected by the wind, the major effecter of sediment resuspension. As a result of sediment resuspension, seston was always richer in inorganic fraction. However, throughout the year of investigation, most particulate organic carbon was quite appealing for filter feeding communities, although the best POM quality was available during phytoplankton blooming. the phytoplankton pool of suspended matter was just a small fraction of the bulk, accounting for only 13% on average of particulate organic carbon. in terms of energy available in the seston, the highest amount was stored in organic matter heterotrophic fraction, whilst the smallest was to be found in living phytoplankton.     

Mineralization of particulate organic matter derived from coral-reef organisms in reef sediments of the Gulf of Aqaba

In situ and laboratory incubation experiments in a fringing reef in the Gulf of Aqaba were performed to study degradation rates of particulate organic matter in reef sediments. Coral mucus, clam eggs, and zooxanthellae were used as model particulate organic compounds for these experiments. Aerobic and anaerobic mineralization rates were calculated by dissolved inorganic carbon (DIC) and O₂ fluxes from the sediments under different particulate organic matter additions. Fast enhancement (approximately twofold) of O₂ and DIC fluxes were found with the addition of coral mucus and clam eggs compared with control incubations without addition. Most of the degradation is believed to have occurred anaerobically rather than aerobically (DIC:O₂ ratios were 4.3–28.1). Higher degradation rates of coral mucus and clam eggs were estimated in carbonate sediment than in silicate sediment (1.2–1.6-fold), which was attributed to the different physical and chemical properties of both sediments. Our study shows the significance of the reef sediment as a suitable site for microbial degradation of particulate organic material excreted from different reef community organisms. This may increase the regeneration of nutrients in the reef environment necessary to sustain high biological productivity.     

Mineralization of particulate organic matter derived from coral-reef organisms in reef sediments of the Gulf of Aqaba

In situ and laboratory incubation experiments in a fringing reef in the Gulf of Aqaba were performed to study degradation rates of particulate organic matter in reef sediments. Coral mucus, clam eggs, and zooxanthellae were used as model particulate organic compounds for these experiments. Aerobic and anaerobic mineralization rates were calculated by dissolved inorganic carbon (DIC) and O₂ fluxes from the sediments under different particulate organic matter additions. Fast enhancement (approximately twofold) of O₂ and DIC fluxes were found with the addition of coral mucus and clam eggs compared with control incubations without addition. Most of the degradation is believed to have occurred anaerobically rather than aerobically (DIC:O₂ ratios were 4.3-28.1). Higher degradation rates of coral mucus and clam eggs were estimated in carbonate sediment than in silicate sediment (1.2-1.6-fold), which was attributed to the different physical and chemical properties of both sediments. Our study shows the significance of the reef sediment as a suitable site for microbial degradation of particulate organic material excreted from different reef community organisms. This may increase the regeneration of nutrients in the reef environment necessary to sustain high biological productivity.     

Pelagic-benthic coupling of the microbial food web modifies nutrient cycles along a cascade-dammed river

• Structure of multi-trophic microbial groups were analyzed using DNA metabarcoding. • Discontinuity and trophic interactions were observed along the dam-fragmented river. • C, N and P cycles are driven by top-down and bottom-up forces of microbial food web. • Pelagic-benthic coupling may intensify nutrient accumulation in the river system. Cascade dams disrupt the river continuum, altering hydrology, biodiversity and nutrient flux. Describing the diversity of multi-trophic microbiota and assessing microbial contributions to the ecosystem processes are prerequisites for the restoration of these aquatic systems. This study investigated the microbial food web structure along a cascade-dammed river, paying special attention to the multi-trophic relationships and the potential role of pelagic-benthic coupling in nutrient cycles. Our results revealed the discontinuity in bacterial and eukaryotic community composition, functional group proportion, as well as α-diversity due to fragmentation by damming. The high microbial dissimilarity along the river, with the total multi-trophic β-diversity was 0.84, was almost completely caused by species replacement. Synchronization among trophic levels suggests potential interactions of the pelagic and the benthic groups, of which the β-diversities were primarily influenced by geographic and environmental factors, respectively. Dam-induced environmental variations, especially hydrological and nutrient variables, potentially influence the microbial food web via both top-down and bottom-up forces. We proposed that the cycles of carbon, nitrogen and phosphorus are influenced by multi-trophic groups through autotrophic and heterotrophic processes, predator–prey relationships, as well as the release of nutrients mainly by microfauna. Our results advance the notion that pelagic-benthic trophic coupling may intensify the accumulation of organic carbon, ammonium and inorganic phosphorus, thereby changing the biogeochemical patterns along river systems. As a consequence, researchers should pay more attention to the multi-trophic studies when assessing the environmental impacts, and to provide the necessary guidance for the ecological conservation and restoration of the dam-regulated systems.     

Sediments distribution of trace metals in a coastal lagoon (Southern Sardinia,Mediterranean Sea): assessment of contamination and ecological risk

Coastal lagoons are subject to several sources of contaminations. To shade light on the contamination level of the Santa Gilla lagoon (Tyrrhenian Sea) we investigated the spatial distribution of Cr, Ni, Pb, Zn and Hg in sediments and their correlation with grain size and organic matter contents. Moreover, sediment contamination levels and the ecological risk associated with metal concentration were assessed using different abiotic indicators. The lagoon is characterised by low levels of contamination, with exceptions for Pb and Hg, whose distribution reflects the position of an old chlor-alkali plant and that of an airport. These results indicate that the restoration put in place 30 years ago have not reached the expected target and that the presence of the airport deserves further attention. In the outer section of the lagoon, where clam fishery occurs, we observed low levels of contamination suggesting that such artisanal fishery could somehow help mobilising metals. We conclude that the area exposed to Hg pollution, though tentatively restored, still suffers of a potential risk of ecosystem deterioration. We pinpoint that further investigations on the mobility, bioavailability and toxicity of metals are needed to finally address the actual impairment of the Santa Gilla lagoon.     

Acceleration of the particulate organic matter hydrolysis by start-up stage recovery and its original microbial mechanism

• Carbon availability was partially solved by POM recovery and fermentation. • 12% carbon sources were regenerated by fermentation of the entrapped 35% TCOD. • The unique microbial communities facilitated the efficient hydrolysis of the POM. • Considerable economic benefits in aeration power and ECS dosage were anticipated. To address the availability of carbon sources for denitrification, the accelerated hydrolysis of the most abundant but low-availability fraction of particulate organic matter (POM) was investigated. Mesh sieves with different pore sizes were used as primary pretreatment at the start-up-stage of the biological process to separate some POM from the liquid system. The changes in soluble carbohydrates and proteins were monitored to investigate the hydrolysis performance of the sieved POM, with waste activated sludge (WAS) as the control test. The results showed that an average of 35% POM could be entrapped before filtrate mat development. In addition, benefiting from the high polysaccharides concentration, as well as the high availability due to the relatively loose physical structure, a 23% hydrolysis efficiency of POM was obtained, in contrast to that of WAS (3.4%), with a hydrolysis constant of 0.39 h⁻¹. The prominent performance was also attributed to the unique microbial communities having been domesticated at a lower temperature, especially the cellulose-degrading bacteria Paraclostridium and psychrophile Psychrobacter, making up 6.94% and 2.56%, respectively. Furthermore, the potential benefits and application of improved POM hydrolysis by start-up stage recovery via mesh sieves combined with anaerobic fermentation were evaluated, including selective POM entrapment, alleviation of blockage and wear, and a reduction in aeration energy. By the proposed strategy, carbon availability for biological nutrient removal (BNR) processes is anticipated to be improved more economically than that can be achieved by primary clarifier elimination.     

Exponential Collapse of Benthic Depurative Capacity in A Eutrophic Tropical Marine Ecosystem: A Threshold Response to Organic Nitrogen Loading

Microbial decomposition of particulate organic matter in sediments can substantially modulate eutrophication of nearshore marine environments. Flux budgets for nitrogen compounds and quantification of rates of microbial transformation can provide important information on the process of eutrophication. This survey documents sediment nitrogen budgets for a eutrophic nearshore marine environment at La Parguera on southwest coast of Puerto Rico, including consideration of the organic fraction in addition to microbial transformations.

Sediments of the inshore channel at La Parguera denote the input of heavy organic loads with low redox potentials and high ammonium contents. Benthic fluxes of dissolved organic nitrogen are below those recorded for ammonium. These observations suggest that nearshore tropical sediments subject to heavy nitrogen loads act as a sink for organic nitrogen and that ammonification is a key process in the release of nitrogen from sediments to the water column. Nitrification and denitrification rates are low overall and inversely related to the redox potential. Depuration of excess nitrogen through denitrification is ineffective in these sediments. in contrast to more robust temperate environments, our work demonstrates that tropical marine systems are particularly susceptible to eutrophication given their limited capacity for depuration of excess nitrogen.     

Exponential Collapse of Benthic Depurative Capacity in A Eutrophic Tropical Marine Ecosystem: A Threshold Response to Organic Nitrogen Loading

Microbial decomposition of particulate organic matter in sediments can substantially modulate eutrophication of nearshore marine environments. Flux budgets for nitrogen compounds and quantification of rates of microbial transformation can provide important information on the process of eutrophication. This survey documents sediment nitrogen budgets for a eutrophic nearshore marine environment at La Parguera on southwest coast of Puerto Rico, including consideration of the organic fraction in addition to microbial transformations.

Sediments of the inshore channel at La Parguera denote the input of heavy organic loads with low redox potentials and high ammonium contents. Benthic fluxes of dissolved organic nitrogen are below those recorded for ammonium. These observations suggest that nearshore tropical sediments subject to heavy nitrogen loads act as a sink for organic nitrogen and that ammonification is a key process in the release of nitrogen from sediments to the water column. Nitrification and denitrification rates are low overall and inversely related to the redox potential. Depuration of excess nitrogen through denitrification is ineffective in these sediments. in contrast to more robust temperate environments, our work demonstrates that tropical marine systems are particularly susceptible to eutrophication given their limited capacity for depuration of excess nitrogen.     

Seasonal and tidal impact on the organic compounds and nutrients distribution in tropical mangroves,Kerala, India

Seasonal changes in the concentration of nutrients and various organic compounds were studied in the waters surrounding mangroves and in the marshy areas of mangroves. Higher amounts of nutrients and organic compounds were observed during low tide. This is due to the remineralisation of plant detritus in this area. High concentration of carbohydrates, proteins, chlorophyll and phosphate were observed during monsoon, which can be attributed to the leaching of plant detritus as well as the land run-off. During pre-monsoon and post-monsoon high tannin and lignin concentration was noted. A 24-hour sampling was also done to study the tidal impact on the concentrations of various organic compounds and nutrients in this ecosystem. Even though a tidal impact was observed, a clear picture was not reported in this study.     

Seasonal and tidal impact on the organic compounds and nutrients distribution in tropical mangroves, Kerala, India

Seasonal changes in the concentration of nutrients and various organic compounds were studied in the waters surrounding mangroves and in the marshy areas of mangroves. Higher amounts of nutrients and organic compounds were observed during low tide. This is due to the remineralisation of plant detritus in this area. High concentration of carbohydrates, proteins, chlorophyll and phosphate were observed during monsoon, which can be attributed to the leaching of plant detritus as well as the land run-off. During pre-monsoon and post-monsoon high tannin and lignin concentration was noted. A 24-hour sampling was also done to study the tidal impact on the concentrations of various organic compounds and nutrients in this ecosystem. Even though a tidal impact was observed, a clear picture was not reported in this study.     

Changes in the Biochemical Composition of Tetraselmis Suecia and Isochrysis Galbana During Growth and Decay

The variations of the biochemical composition of Tetraselmis suecica and Isochrysis galbana during growth and decay were determined. the content of chlorophyll a (Chl-a) of the cultures, as expected, slowly degraded into phaeopigments during decay, confirming that chlorophyll measurements do not always provide an accurate estimate of phytoplanktonic biomass and, consequently, may fail if used to measure the food availability of particulate matter for consumers. Measurements of total amounts of proteins, carbohydrates and lipids, related to the nutritional value of particles in terms of caloric content, are shown to provide information on the readily available food for consumers, particularly during the blooms. the protein/carbohydrate, C/N and POC/Chl-a ratios were used to evaluate the differences between these two species during the growth and the decomposition processes. A comparison between experimental and field conditions was undertaken to implement our understanding of the growth and degradation processes of particulate organic matter of phytoplanktonic origin in the sea and its role on natural systems, during and after phytoplankton blooms.     

Sources and major biogeochemical pathways of organic matter in the mangrove system of Rufiji estuary

Fatty acids were extracted from the surface sediments (10 cm) of three sampling sites of Rufiji estuary to infer their sources and biogeochemical pathways. The fatty acids ranging from C₈ to C₂₄ were distinguished from this study, and were broadly classified into saturated (SFAs), monounsaturated (MUFAs) and polyunsaturated fatty acids (PUFAs). SFAs were found to be the major fraction at station 1 and 3 where as at station 2, MUFAs dominated. A total of 19 fatty acids with a total concentration of 64.91 μg/g dry weight were characterised at station 1. C_16:0 was the most abundant fatty acid contributing 21.94% of total fatty acids (TFAs). C_22:2 was the second most abundant, which accounted for 9.46% of TFAs. Fatty acids ranging from C₁₂ to C₂₄ were identified at station 2. C₂₀ fatty acid was the most abundant fatty acid contributing 21.94%, followed by C_16:0. At station 3, fatty acids ranging from C₈ to C₂₄ were obtained. The PUFA C_20:5n-3 was the most abundant fatty acid contributing 21.65%, followed by C_24:0 (15.00% of TFAs). The ratio of lower molecular weight (LMW) to higher molecular weight (HMW) biomarkers was used as an indicators to distinguish higher plants organic matter from algae-derived fatty acids.     

Effect on benthic communities of a major input of organic matter and other pollutants (coast off Barcelona,Western Mediterranean)

Benthic communities on soft bottoms off Barcelona, at and around two main pollution sources, the mouth of the Besòs River and the outlet of the submarine pipeline draining wastewater and organic sludges from the wastewater treatment plant of Sant Adrià del Besòs, have been studied. Samples were obtained with a Van Veen grab from 36 stations covering a 100 km² grid, between 10 and 70 m in depth. The effect of both pollution sources is clearly seen both at the species (the following macrofauna groups have been studied: Polychaeta, Mollusca, Echinodermata and Crustacea Decapoda) and community levels. The distribution of species and individuals numbers, species diversity and a pollution index, and of some selected (indicator) polychaeta species, all clearly define the degree of environmental degradation and the extent of the areas under the influence of the organic pollution.     

Optical remote sensing of coastal plumes and run-off in the Mediterranean region

Sea surface colour data, derived from the Coastal Zone Colour Scanner (CZCS) archive, have been used to assess the space/time variability of coastal plumes and run-off in the Mediterranean Sea. A time series of 2645 scenes, collected by the CZCS from 1979 to 1985, was processed to apply sensor calibration algorithms, correct for atmospheric contamination, and derive chlorophyll-like pigment concentration. Individual images, remapped on a 1-km² pixel grid, were generated for each available day, and then mean values calculated pixel by pixel to form monthly, seasonal and annual composites. The results obtained must be taken with caution, due to the CZCS limitations in the quantitative assessment of bio-optical pigments when high concentrations of dissolved organics or suspended sediments are present, e.g. along littorals or within plumes. Marked differences appear in the distribution of water constituents between coastal zones and open sea, northern and southern near-coastal areas, western and eastern sub-basins. The oligotrophic character of the basin contrasts with areas of high concentration related to river plumes—Ebro (Ebre), Po, Rhone, Nile—, coastal run-off patterns, and persistent mesoscale features (e.g. coastal filaments and eddies). Seasonal variability appears to be high, with higher concentrations occurring over most of the basin in the cold season, when climatic conditions are favourable to coastal run-off and vertical mixing. Atmospheric forcing (wind and rainfall over continental margins) could play an important role in establishing the observed space/time distribution of water constituents. The impact of continental interactions (fluvial and coastal run-off), or that of exchanges between coastal zone and open sea, could have paramount influence on the biogeochemical fluxes in the entire basin.     

不同生态类型富营养化湖泊沉积物中有机质赋存形态

以藻型湖泊(太湖)、草藻型湖泊(南四湖)、草型湖泊(白洋淀)湖泊沉积物为研究对象,采集了11个表层沉积物样品,测定沉积物中总氮(TN)和总磷(TP)含量并利用物理分组方法,研究了3种不同生态型湖及同一湖泊不同区域沉积物中总有机质(OM)、轻组有机质(LFOM)和重组有机质(HFOM)的赋存特征.结果表明,南四湖沉积物中总氮、总磷和总有机质含量显著高于太湖和白洋淀;尽管太湖、南四湖和白洋淀沉积物中总有机质含量较高,但是轻组有机质(LFOM)含量较低,分别占总有机质的0.95%—1.08%、0.21%—1.37%和1.4%—1.78%;重组有机质(HFOM)含量较高,分别占总有机质的83.83%—87.4%、94%—98.98%和88.2%—98.3%,表明3种不同生态型湖泊沉积物中所含有机质绝大部分为难分解的重组有机质,轻组有机质基本矿化分解.相关性分析表明,轻组有机质(LFOM)、重组有机质(HFOM)与总有机质(OM)之间均呈现显著正相关关系.     

Atmospheric particulate matter and air quality in the Mediterranean: a review

This article synthesises the results obtained in several projects on atmospheric aerosol (particulate matter – PM) pollution developed during the last years in the Western Mediterranean. It focuses on particulate matter sources and the strategies for suitable monitoring in ambient air. The article has been structured in several sections that give response to the main questions that prompted these studies. After analysing the main PM features in the Mediterranean, a brief review of the main factors differentiating the particulate matter composition with respect to Central Europe is presented. Finally, the suitability of the different metrics or parameters for monitoring ambient air PM levels in different types of environments is discussed. Selected article from the 6th European Meeting on Environmental Chemistry, University of Belgrade, Serbia and Montenegro organized by Prof. Dr. Branimir Jovancicevic (www.research.plymouth.ac.uk/ace).     

Role of microorganisms and macrofauna in benthic phosphorus dynamics in the po river--Adriatic Sea frontal system: An experimental approach

Sediment biotic and abiotic attributes were determined during the PRISMA II oceanographic campaigns in the northern and central Adriatic Sea. The radiotracer orthophosphate 32 P was used under laboratory conditions to analyse the role of micro- and macrofauna in phosphorus dynamics at the water-sediment interface. Effects of infaunal suspensivores on microfungal growth were also investigated. Our findings emphasised: 1) significant differences in sediment 32 P uptake as related to the sampling area, occurrence of the pelagic frontal system, sediment grain size, microbial activity, and anoxia; 2) the crucial role played in 32 P dynamics by different tropho-functional groups r - r i.e ., infaunal filter-feeders and epifaunal detritivore characterising the benthic community of the northern Adriatic basin. The significant changes in ergosterol concentration (adopted as an index of microfungal growth) observed in sediments subjected to infaunal activity, eventually provided a comprehensive insight into macrofauna-microorganism interactions. The potential impact of macrofaunal activity in phosphorus dynamics in the Adriatic benthic system is discussed.     

Spring and autumn spatial distribution of zooplankton carbon requirement across the Mediterranean Sea

Zooplankton represents a key contributor to the ocean biological pump through its consumption of sinking and suspended carbon. A specific and highly sensitive method to evaluate zooplankton carbon requirement from the sinking flux is through the estimation of the activity of the electron transport system. The present study was carried out from samplings in 2006, and it was focused on the spatial 200–0?m zooplankton carbon demand across 24 sampling stations, along the Mediterranean Sea, from the island of Crete to the Strait of Gibraltar. Its potential day/night variability was evaluated. The zooplankton composition, abundance and biomass were investigated. The carbon demand per unit zooplankton biomass indicates geographical and diel differences among the sampling stations. A higher mean carbon demand was seen for the western Mediterranean with respect to the eastern Mediterranean, which can be justified through the observed ratio of gelatinous:crustacean taxa and the water temperatures recorded. Higher carbon demand was measured in samples collected during the dark hours. The relation to the presence and abundance of actively migrating euphausiids and copepods was discussed. A comparison with data from another of our study carried out in the same study area but in another seasonal period was done.