Maximizing the phylogenetic diversity of seed banks

Ex situ conservation efforts such as those of zoos, botanical gardens, and seed banks will form a vital complement to in situ conservation actions over the coming decades. It is therefore necessary to pay the same attention to the biological diversity represented in ex situ conservation facilities as is often paid to protected‐area networks. Building the phylogenetic diversity of ex situ collections will strengthen our capacity to respond to biodiversity loss. Since 2000, the Millennium Seed Bank Partnership has banked seed from 14% of the world's plant species. We assessed the taxonomic, geographic, and phylogenetic diversity of the Millennium Seed Bank collection of legumes (Leguminosae). We compared the collection with all known legume genera, their known geographic range (at country and regional levels), and a genus‐level phylogeny of the legume family constructed for this study. Over half the phylogenetic diversity of legumes at the genus level was represented in the Millennium Seed Bank. However, pragmatic prioritization of species of economic importance and endangerment has led to the banking of a less‐than‐optimal phylogenetic diversity and prioritization of range‐restricted species risks an underdispersed collection. The current state of the phylogenetic diversity of legumes in the Millennium Seed Bank could be substantially improved through the strategic banking of relatively few additional taxa. Our method draws on tools that are widely applied to in situ conservation planning, and it can be used to evaluate and improve the phylogenetic diversity of ex situ collections. Maximizar la Riqueza Filogenética de los Bancos de Semillas     

Spatial predictions of phylogenetic diversity in conservation decision making

Considering genetic relatedness among species has long been argued as an important step toward measuring biological diversity more accurately, rather than relying solely on species richness. Some researchers have correlated measures of phylogenetic diversity and species richness across a series of sites and suggest that values of phylogenetic diversity do not differ enough from those of species richness to justify their inclusion in conservation planning. We compared predictions of species richness and 10 measures of phylogenetic diversity by creating distribution models for 168 individual species of a species-rich plant family, the Cape Proteaceae. When we used average amounts of land set aside for conservation to compare areas selected on the basis of species richness with areas selected on the basis of phylogenetic diversity, correlations between species richness and different measures of phylogenetic diversity varied considerably. Correlations between species richness and measures that were based on the length of phylogenetic tree branches and tree shape were weaker than those that were based on tree shape alone. Elevation explained up to 31% of the segregation of species rich versus phylogenetically rich areas. Given these results, the increased availability of molecular data, and the known ecological effect of phylogenetically rich communities, consideration of phylogenetic diversity in conservation decision making may be feasible and informative.     

Use of environmental DNA in assessment of fish functional and phylogenetic diversity

Assessing the impact of global changes and protection effectiveness is a key step in monitoring marine fishes. Most traditional census methods are demanding or destructive. Nondisturbing and nonlethal approaches based on video and environmental DNA are alternatives to underwater visual census or fishing. However, their ability to detect multiple biodiversity factors beyond traditional taxonomic diversity is still unknown. For bony fishes and elasmobranchs, we compared the performance of eDNA metabarcoding and long-term remote video to assess species’ phylogenetic and functional diversity. We used 10 eDNA samples from 30 L of water each and 25 hr of underwater videos over 4 days on Malpelo Island (pacific coast of Colombia), a remote marine protected area. Metabarcoding of eDNA detected 66% more molecular operational taxonomic units (MOTUs) than species on video. We found 66 and 43 functional entities with a single eDNA marker and videos, respectively, and higher functional richness for eDNA than videos. Despite gaps in genetic reference databases, eDNA also detected a higher fish phylogenetic diversity than videos; accumulation curves showed how 1 eDNA transect detected as much phylogenetic diversity as 25 hr of video. Environmental DNA metabarcoding can be used to affordably, efficiently, and accurately census biodiversity factors in marine systems. Although taxonomic assignments are still limited by species coverage in genetic reference databases, use of MOTUs highlights the potential of eDNA metabarcoding once reference databases have expanded.     

Effectiveness of protected areas for vertebrates based on taxonomic and phylogenetic diversity

Establishing protected areas is the primary goal and tool for preventing irreversible biodiversity loss. However, the effectiveness of protected areas that target specific species has been questioned for some time because targeting key species for conservation may impair the integral regional pool of species diversity and phylogenetic and functional diversity are seldom considered. We assessed the efficacy of protected areas in China for the conservation of phylogenetic diversity based on the ranges and phylogenies of 2279 terrestrial vertebrates. Phylogenetic and taxonomic diversity were strongly and positively correlated, and only 12.1–43.8% of priority conservation areas are currently protected. However, the patterns and coverage of phylogenetic diversity were affected when weighted by species richness. These results indicated that in China, protected areas targeting high species richness protected phylogenetic diversity well overall but failed to do so in some regions with more unique or threatened communities (e.g., coastal areas of eastern China, where severely threatened avian communities were less protected). Our results suggest that the current distribution of protected areas could be improved, although most protected areas protect both taxonomic and phylogenetic diversity.     

Negative selection effects suppress relationships between bacterial diversity and ecosystem functioning

I assembled bacterial communities to explore the effects of bacterial diversity on multiple ecosystem functions, including bacterial community biovolume, decomposition of particulate organic matter, and biomass transfer to the next trophic level. The experiment used a two-way factorial design with four levels of bacterial diversity (one to four species) and the absence/presence of a bacterivorous ciliated protist Tetrahymena pyriformis as two main factors, and all possible combinations of the four bacterial taxa nested within each diversity level. Bacterial community biovolume increased as bacterial diversity increased, a result due largely to positive selection effects. Decomposition and consumer abundance, however, were unaffected by bacterial diversity, though both varied among bacterial composition treatments. Negative selection effects, the dominance of species that do not contribute significantly to ecosystem functioning, accounted for the lack of diversity effects on decomposition and consumer abundance. The presence of Tetrahymena reduced bacterial community biovolume but increased decomposition, without altering the diversity-functioning relationships. Decomposition was strongly linked with consumer abundance such that communities supporting larger consumer biomass exhibited higher decomposition rates. This study suggests that if the negative selection effect is common, as it might be when examining ecosystem variables other than biomass (due to the presence of keystone species that can contribute disproportionably to ecosystem functioning relative to their abundances), basic bacteria-mediated ecosystem processes, such as decomposition and energy transfer to the next trophic level, may not increase with bacterial diversity.     

Microbial community phylogenetic and trait diversity declines with depth in a marine oxygen minimum zone

Oxygen minimum zones (OMZs) are natural physical features of the world's oceans. They create steep physiochemical gradients in the water column, which most notably include a dramatic draw down in oxygen concentrations over small vertical distances (<100 m). Microbial communities within OMZs play central roles in ocean and global biogeochemical cycles, yet we still lack a fundamental understanding of how microbial biodiversity is distributed across OMZs. Here, we used metagenomic sequencing to investigate microbial diversity across a vertical gradient in the water column during three seasons in the Eastern Tropical South Pacific (ETSP) OMZ. Based on analysis of small subunit ribosomal RNA (SSU rRNA) gene fragments, we found that both taxonomic and phylogenetic diversity declined steeply along the transition from oxygen-rich surface water to the permanent OMZ. We observed similar declines in the diversity of protein-coding gene categories, suggesting a decrease in functional (trait) diversity with depth. Metrics of functional and trait dispersion indicated that microbial communities are phylogenetically and functionally more overdispersed in oxic waters, but clustered within the OMZ. These dispersion patterns suggest that community assembly drivers (e.g., competition, environmental filtering) vary strikingly across the oxygen gradient. To understand the generality of our findings, we compared OMZ results to two marine depth gradients in subtropical oligotrophic sites and found that the oligotrophic sites did not display similar patterns, likely reflecting unique features found in the OMZ. Finally, we discuss how our results may relate to niche theory, diversity-energy relationships and stress gradients.     

Trends over time in tree and seedling phylogenetic diversity indicate regional differences in forest biodiversity change

Changing climate conditions may impact the short-term ability of forest tree species to regenerate in many locations. In the longer term, tree species may be unable to persist in some locations while they become established in new places. Over both time frames, forest tree biodiversity may change in unexpected ways. Using repeated inventory measurements five years apart from more than 7000 forested plots in the eastern United States, we tested three hypotheses: phylogenetic diversity is substantially different from species richness as a measure of biodiversity; forest communities have undergone recent changes in phylogenetic diversity that differ by size class, region, and seed dispersal strategy; and these patterns are consistent with expected early effects of climate change. Specifically, the magnitude of diversity change across broad regions should be greater among seedlings than in trees, should be associated with latitude and elevation, and should be greater among species with high dispersal capacity. Our analyses demonstrated that phylogenetic diversity and species richness are decoupled at small and medium scales and are imperfectly associated at large scales. This suggests that it is appropriate to apply indicators of biodiversity change based on phylogenetic diversity, which account for evolutionary relationships among species and may better represent community functional diversity. Our results also detected broadscale patterns of forest biodiversity change that are consistent with expected early effects of climate change. First, the statistically significant increase over time in seedling diversity in the South suggests that conditions there have become more favorable for the reproduction and dispersal of a wider variety of species, whereas the significant decrease in northern seedling diversity indicates that northern conditions have become less favorable. Second, we found weak correlations between seedling diversity change and latitude in both zones, with stronger relationships apparent in some ecoregions. Finally, we detected broadscale seedling diversity increases among species with longer-distance dispersal capacity, even in the northern zone, where overall seedling diversity declined. The statistical power and geographic extent of such analyses will increase as data become available over larger areas and as plot measurements are repeated at regular intervals over a longer period of time.     

Functional diversity loss and change in nocturnal behavior of mammals under anthropogenic disturbance

In the Anthropocene, understanding the impacts of anthropogenic influence on biodiversity and behavior of vulnerable wildlife communities is increasingly relevant to effective conservation. However, comparative studies aimed at disentangling the concurrent effect of different types of human disturbance on multifaceted biodiversity and on activity patterns of mammals are surprisingly rare. We applied a multiregion community model to separately estimate the effects of cumulative human modification (e.g., settlement, agriculture, and transportation) and human presence (aggregated presence of dogs, people, and livestock) on species richness and functional composition of medium- and large-bodied mammals based on camera trap data collected across 45 subtropical montane forests. We divided the detected mammal species into three trophic guilds–carnivores, herbivores, and omnivores–and assessed the nocturnal shifts of each guild in response to anthropogenic activities. Overall, species richness tended to increase (β coefficient = 0.954) as human modification increased but richness decreased as human presence increased (β = –1.054). Human modification was associated with significantly lower functional diversity (mean nearest taxon distance [MNTD], β = –0.134; standardized effect sizes of MNTD, β = –0.397), community average body mass (β = –0.240), and proportion of carnivores (β = –0.580). Human presence was associated with a strongly reduced proportion of herbivores (β = –0.522), whereas proportion of omnivores significantly increased as human presence (β = 0.378) and habitat modification (β = 0.419) increased. In terms of activity patterns, omnivores (β = 12.103) and carnivores (β = 9.368) became more nocturnal in response to human modification. Our results suggest that human modification and human presence have differing effects on mammals and demonstrate that anthropogenic disturbances can lead to drastic loss of functional diversity and result in a shift to nocturnal behavior of mammals. Conservation planning should consider concurrent effects of different types of human disturbance on species richness, functional diversity, and behavior of wildlife communities.     

Comparison of chlorophyll a and carotenoid pigments as predictors of phytoplankton biomass

Chlorophyll a concentration was compared with carotenoid concentration as a predictor of seasonal changes in phytoplankton biomass within Bedford Basin, Nova Scotia, Canada (1976–1977). For all seasons, predictions of biomass from different measures of chlorophyll a were poor and were not improved when chlorophyll a was measured accurately by chromatography. Chlorophyll a and a carotenoid (fucoxanthin) were highly correlated and equally good predictors of total biomass, but neither was related to changes in peridinin concentration. Correlations between specific carotenoids and diatom or dinoflagellate biomass indicate that carotenoids may be useful to describe changes in biomass composition. For all pigments measured, predictions of biomass were hampered when large dinoflagellate cells were present, which biased estimates of total cell volume. Regardless of species composition or cell density, dinoflagellate biomass contributed on the average 68% of the total cell volume measured each day compared with only 14% for diatoms and 17% for flagellates, the most abundant taxa.     

Impacts of urbanization: diversity and the symbiotic relationships of rural,urban, and spaces in-between

This Impacts article proposes strategies for mitigating negative impacts of urbanization in rural locations in the United States. Issues addressed include impacts of population growth and development, loss of agricultural lands, and impacts of climate change on agriculture and rural communities. Conclusions are supported by stakeholder survey data, geographic information systems-based data, and desktop reviews of research journal publications. We propose a sustainable, diversified approach that supports mitigation of issues, including increasing demand on food production and decline of rural communities. A key issue that we address is where we will find suitable landscapes to reduce enough food for 9.6 billion people living in 2050.

Urban and rural development planners are grappling with solutions to escalating impacts global populations, stresses on food production, and effects of climate change. Solutions are identified, including strengthening rural and urban contexts by establishing connected and interdependent links that support diversification of rural and urban contexts as viable solutions to these issues.

Diversified rural-to-urban sustainable agriculture production is a promising approach to addressing climate change impacts. Organic agriculture principles exhibit strong diversity and are accredited by United States Department of Agriculture as the only federally certified sustainable agriculture practice in the United States. Sustainable agriculture practices are evolving into profitable diversified alternative food sources. We offer substantiated alternative solutions for remediating impacts of urbanization on rural agriculture and communities. Collectively, these solutions can strengthen symbiotic relationships between sustainable agriculture and rural communities, addressing our growing population issues and preserving our dwindling farmlands and rural communities.     

Seed plant phylogenetic diversity and species richness in conservation planning within a global biodiversity hotspot in eastern Asia

One of the main goals of conservation biology is to understand the factors shaping variation in biodiversity across the planet. This understanding is critical for conservation planners to be able to develop effective conservation strategies. Although many studies have focused on species richness and the protection of rare and endemic species, less attention has been paid to the protection of the phylogenetic dimension of biodiversity. We explored how phylogenetic diversity, species richness, and phylogenetic community structure vary in seed plant communities along an elevational gradient in a relatively understudied high mountain region, the Dulong Valley, in southeastern Tibet, China. As expected, phylogenetic diversity was well correlated with species richness among the elevational bands and among communities. At the community level, evergreen broad‐leaved forests had the highest levels of species richness and phylogenetic diversity. Using null model analyses, we found evidence of nonrandom phylogenetic structure across the region. Evergreen broad‐leaved forests were phylogenetically overdispersed, whereas other vegetation types tended to be phylogenetically clustered. We suggest that communities with high species richness or overdispersed phylogenetic structure should be a focus for biodiversity conservation within the Dulong Valley because these areas may help maximize the potential of this flora to respond to future global change. In biodiversity hotspots worldwide, we suggest that the phylogenetic structure of a community may serve as a useful measure of phylogenetic diversity in the context of conservation planning.     

Microbial diversity and ecological networks as indicators of environmental quality

Evaluating the quality of ecosystems in terms of biological patrimony and functioning is of critical importance in the actual context of intensified human activities. Microbial diversity is commonly used as a bioindicator of ecosystems functioning. However, there is a lack of sensitivity of microbial diversity indicators in the case of moderate and chronic environmental degradation, such as atmospheric deposition of pollutants, agricultural practices, diffuse pollution by wastewater and climate change. As a consequence, there is a need for alternative bioindicators of soils and water quality. Here, we discuss the interest of adopting a more integrative approach based on biotic interaction networks beyond the simple diversity indicators. We review how the various biotic interactions can be integrated in the various microbial networks such as trophic, mutualistic and co-occurrence networks. Then we discuss the efficiency of microbial networks and associated metrics to detect changes in microbial communities. We conclude that the connectance, the number of links and the average degree of co-occurrence networks could vary from 10 to 50% in response to minor perturbations when microbial diversity parameters remain stable. Finally, we analyze studies that aimed at linking microbial networks and activity to evaluate the potential of such networks for providing simple and operational indicators of ecosystem quality and functioning.     

Technological pluralism and diversity as fundamental prerequisites for sustainability

SUMMARY

A definition of technological pluralism and diversity is presented, together with a concept of viability, within the context of sustainable development. The existing contrast with technological homogeneity is also discussed in order to show that the former concept is a necessary prerequisite for the pursuit of sustainability, whereas the latter has led to a process of cultural homogenisation, with the generally acknowledged repercussions for past and present forms of development. The availability of a number of different viable options can be considered a fundamental prerequisite for the most appropriate choice to be made by both producers and consumers; whereas, if only one technical solution is available and ready to be implemented (or requires only marginal modifications), then producers from the various socioeconomic sectors are obliged to implement that solution. This may sometimes have its advantages but very often will have serious drawbacks which may well impede the pursuit of sustainability.

The question of the current form of product diversification is also analysed to see whether it may be advantageous within a sustainable society, and to discover if there is any contrast between this type of diversification and technological pluralism/diversity, and how this contrast may be overcome.     

Incompletely resolved phylogenetic trees inflate estimates of phylogenetic conservatism

The tendency for more closely related species to share similar traits and ecological strategies can be explained by their longer shared evolutionary histories and represents phylogenetic conservatism. How strongly species traits co-vary with phylogeny can significantly impact how we analyze cross-species data and can influence our interpretation of assembly rules in the rapidly expanding field of community phylogenetics. Phylogenetic conservatism is typically quantified by analyzing the distribution of species values on the phylogenetic tree that connects them. Many phylogenetic approaches, however, assume a completely sampled phylogeny: while we have good estimates of deeper phylogenetic relationships for many species-rich groups, such as birds and flowering plants, we often lack information on more recent interspecific relationships (i.e., within a genus). A common solution has been to represent these relationships as polytomies on trees using taxonomy as a guide. Here we show that such trees can dramatically inflate estimates of phylogenetic conservatism quantified using S. P. Blomberg et al.'s K statistic. Using simulations, we show that even randomly generated traits can appear to be phylogenetically conserved on poorly resolved trees. We provide a simple rarefaction-based solution that can reliably retrieve unbiased estimates of K, and we illustrate our method using data on first flowering times from Thoreau's woods (Concord, Massachusetts, USA).     

Species traits as predictors of lepidopteran composition in restored and remnant tallgrass prairies.

Restoration ecologists are increasingly turning to the development of trait-filter models, which predict how evolved traits limit species membership within assemblages depending on existing abiotic or biotic constraints, as a tool to explain how species move from a regional species pool into a restored community. Two often untested assumptions of these models, however, are that species traits can reliably predict species' broadscale distribution and that the effects of traits on community membership do not vary between restored and remnant habitats. The goals of this study were to determine whether combinations of ecological traits predispose moth species toward recolonization of restored prairies and to assess the degree to which restored prairies contain moth assemblages comparable with prairie remnants. In 2004, we collected 259 moth species from 13 tallgrass prairie remnants and restorations in central Iowa. Principal components analysis (PCA) was used to identify significant combinations of ecological traits that were shared by groups of moth species. Logistic regression was then employed to test for significant effects of the trait combinations on the frequency of prairie sites occupied by moth species. PCA partitioned moth traits into four axes that explained a total of 81.6% of the variance. Logistic regression detected significant effects for all four PCA axes on the fraction of sites occupied by moths. Species frequently filtered from the regional species pool into prairies were those that had long flight periods and were multivoltine, displayed a feeding preference for legumes but not other forb families, and were regionally abundant but relatively small in body size. Ordination revealed significant differences in moth communities among prairies, suggesting that species traits and habitat characteristics likely interact to create observed patterns of species recolonization of restorations. Thus, the optimal approach to restoring the lepidopteran fauna of tallgrass prairies may involve locating prairie plantings adjacent to habitat remnants.     

Environmental diversity as a surrogate for species representation

Because many species have not been described and most species ranges have not been mapped, conservation planners often use surrogates for conservation planning, but evidence for surrogate effectiveness is weak. Surrogates are well‐mapped features such as soil types, landforms, occurrences of an easily observed taxon (discrete surrogates), and well‐mapped environmental conditions (continuous surrogate). In the context of reserve selection, the idea is that a set of sites selected to span diversity in the surrogate will efficiently represent most species. Environmental diversity (ED) is a rarely used surrogate that selects sites to efficiently span multivariate ordination space. Because it selects across continuous environmental space, ED should perform better than discrete surrogates (which necessarily ignore within‐bin and between‐bin heterogeneity). Despite this theoretical advantage, ED appears to have performed poorly in previous tests of its ability to identify 50 × 50 km cells that represented vertebrates in Western Europe. Using an improved implementation of ED, we retested ED on Western European birds, mammals, reptiles, amphibians, and combined terrestrial vertebrates. We also tested ED on data sets for plants of Zimbabwe, birds of Spain, and birds of Arizona (United States). Sites selected using ED represented European mammals no better than randomly selected cells, but they represented species in the other 7 data sets with 20% to 84% effectiveness. This far exceeds the performance in previous tests of ED, and exceeds the performance of most discrete surrogates. We believe ED performed poorly in previous tests because those tests considered only a few candidate explanatory variables and used suboptimal forms of ED's selection algorithm. We suggest future work on ED focus on analyses at finer grain sizes more relevant to conservation decisions, explore the effect of selecting the explanatory variables most associated with species turnover, and investigate whether nonclimate abiotic variables can provide useful surrogates in an ED framework.     

Molecular taxonomy of vestimentiferans of the western Pacific,and their phylogenetic relationship to species of the eastern Pacific III. Alaysia-like vestimentiferans and relationships among families

The phylogenetic status of Alaysia-like vestimentiferans, which were collected at eight sites in the western Pacific, was analyzed on the basis of the nucleotide sequence of part of a mitochondrial gene for cytochrome oxidase I. The 123 individuals analyzed were tentatively classified into four species, which inhabit, respectively, seep areas off the central part of the Japanese mainland, hydrothermal vent fields in the Mid-Okinawa Trough, hydrothermal vent fields in the southern Okinawa Trough, and both seep and vent sites in the Bismarck Sea. From six additional lamellibrachiid specimens from two sites in the Bismarck Sea, two new tentative species were recognized, namely, one from a seep area off Papua New Guinea and another from the hydrothermal vent field at the DESMOS site in the Manus Basin. Phylogenetic analysis using all available sequences of six vestimentiferan families and Alaysia-like vestimentiferans revealed that vestimentiferans could be divided into three groups, namely, lamellibrachiids, escarpiids, and others, even though the monophyly of the third group was supported by only low bootstrap probabilities. Within the first group, the earliest divergence of a tentative lamellibrachiid species from the DESMOS site was apparent. All Alaysia-like vestimentiferans formed a monophyletic group with Arcovestia ivanovi from the Manus Basin, and it is suggested that this group might be derived from vestimentiferans that are endemic to the hydrothermal sites in the Eastern Pacific Rise.     

功能性低聚糖在饲料添加剂中的应用

低聚糖或称寡糖是由2-10个单糖分子通过糖苷键连接组成的小聚合体。作为一种新型的功能性饲料添加剂,在动物体内可促进消化道有益菌的生长,抑制有害病原菌的繁殖,提高动物机体免疫力。多数试验研究表明,饲料中添加适量低聚糖,能在较大程度上替代抗生素而改善动物健康,增强抗病力,提高家禽及幼龄动物成活率,提高动物的生长增重和饲料转化率。     

Exploring the diversity of neem bioactives as eco-benign pesticides: a reappraisal

Biological activity of neem seeds, leaves and bark is well-established as feeding deterrent and growth disrupter against insects and other arthropods. Neem is a valuable natural pesticide with low toxicity for vertebrates. However, it has not yet achieved a prominent place among pesticides due to its unstability. Recent studies have focused on newer formulations like microencapsulation, inclusion complexes, microemulsion, and granular formulations to enhance efficacy shelf life. Several studies have been undertaken on the effects of neem on predator, parasitoids, and other beneficial organisms as well as impact on the environment. Biotechnological interventions have been carried out for mass production of the active molecule. Once stable formulations of the active molecules are developed, the farming community will benefit the most due to the low toxicity and marked efficacy of neem insecticides.     

High seagrass diversity and canopy-height increase associated fish diversity and abundance

Seagrass species function as typical foundation species that unifies most ecosystem processes. This ecosystem role depends largely on the morphological characteristics and structural complexity of seagrass beds, including their ecological importance for fish species. This study examined relationships between seagrass bed characteristics and associated fish communities in mixed seagrass beds. Correspondence analysis (CA) and canonical correlation analysis (CCoA) were performed to estimate relationships for individual seagrass bed characteristics. The CCoA results revealed that species richness and three-dimensional structure of seagrass had great effect on the biomass and richness of the associated fish community. The CA results revealed that the relative importance of seagrass bed characteristics differed among fish functional groups including fishes appearing on the surface of, inside, and on the bottom of seagrass beds. The fishes found on the surface of the beds preferred beds with low seagrass biomass and high three-dimensional structure, those inside the beds preferred beds with high seagrass biomass and high three-dimensional structure, and those on the bottom of the beds preferred locations with low seagrass biomass and low three-dimensional structure. The results of this study provide compelling evidence that seagrass beds with high species diversity and high three-dimensional structure, but intermediate biomass, may provide the great benefit to the associated fish community. Such niche complementarity among fishes may be a process facilitated by seagrass diversity for secondary production as an ecosystem functioning.