Community assembly in epiphytic lichens in early stages of colonization

Colonization studies may function as natural experiments and have the potential of addressing important questions about community assembly. We studied colonization for a guild of epiphytic lichens in a former treeless heathland area of 170 km2 in southwest Norway. We investigated if epiphytic lichen species richness and composition on aspen (Populus tremula) trees corresponded to a random draw of lichen individuals from the regional species pool. We compared lichen communities of isolated young (55-120 yr) and old (140-200 yr) forest patches in the heathland area to those of aspen forest in an adjacent reference area that has been forested for a long time. All thalli (lichen bodies) of 32 selected lichen species on trunks of aspen were recorded in 35 aspen sites. When data for each site category (young, old, and reference) were pooled, we found the species richness by rarefaction to be similar for reference sites and old sites, but significantly lower for young sites. The depauperated species richness of young sites was accompanied by a skew in species composition and absence of several species that were common in the reference sites. In contrast, genetic variation screened with neutral microsatellite markers in the lichen species Lobaria pulmonaria showed no significant differences between site categories. Our null hypothesis of a neutral species assembly in young sites corresponding to a random draw from the regional species pool was rejected, whereas an alternative hypothesis based on differences in colonization capacity among species was supported. The results indicate that for the habitat configuration in the heathland area (isolated patches constituting < 0.4% of the area) lichen communities may need a colonization time of 100-150 yr for species richness to level off, but given enough time, isolation will not affect species richness. We suggest that this contradiction to expectations from classical island equilibrium theory results from low extinction rates.     

Characterization and speciation of mercury in mosses and lichens from the high-altitude Tibetan Plateau

The accumulation and species of mercury (Hg) in mosses and lichens collected from high-altitude Tibetan Plateau were studied. The altitudes of the sampling sites spanned from 1983 to 5147 m, and a total of 130 mosses and 52 lichens were analyzed. The total mercury (THg) contents in mosses and lichens were in the ranges of 13.1–273.0 and 20.2–345.9 ng/g, respectively. The average ratios of methylmercury (MeHg) in THg in mosses and lichens were 2.4 % (0.3–11.1 %) and 2.7 % (0.4–9.6 %), respectively, which were higher than those values reported in other regions. The contents of THg in both mosses and lichens were not correlated with the THg in soils (p > 0.05). The lipid contents displayed a significantly positive correlation with concentrations of MeHg in mosses (r = 0.461, p < 0.01, n = 90), but not in lichens. The correlations between Hg contents in mosses and the altitudes, latitudes and longitudes of sampling sites indicated the mountain trapping and spatial deposition of Hg in the Tibetan Plateau.     

不同生长基质中叶状地衣共生藻的分离与鉴定

采用形态鉴定及基于ITS及rbcL序列构建ML系统发育树对采自云南省姚安县及南华县的10种叶状地衣中分离纯化培养的共生藻进行分析研究。鉴定结果表明5个编号分别为Z1、Z4、Z5、Z6、Z9的树生地衣共生藻样品鉴定为念珠藻目（Nostocales）念珠藻科（Nostocaceae）念珠藻属（Nostoc）;2个土生地衣共生藻样品Z2、Z10鉴定为四孢藻目（Tetrasporales）胶球藻科（Coccomyxaceae）胶球藻属（Coccomyxa）;3个石生地衣分离藻样品Z3、Z7、Z8鉴定为绿球藻目（Chlorococcales）栅藻科（Scenedesmaceae）链带藻属（Desmodesmus）。另外从地衣采集地及分子系统分析结果可以看出,尽管Z1、Z5、Z9分别是从采自不同区域（姚安县及南华县）的地衣中分离纯化的,但亲缘关系最近;同样Z4、Z6亲缘关系最近;Z2、Z10亲缘关系最近,Z7、Z8亲缘关系最近。所以地衣共生菌与共生藻的共生关系与其生存的地理区域关系不大,但却和其生长基质有明显的相关性。     

Influence of environment, disturbance, and ownership on forest vegetation of coastal Oregon.

Information about how vegetation composition and structure vary quantitatively and spatially with physical environment, disturbance history, and land ownership is fundamental to regional conservation planning. However, current knowledge about patterns of vegetation variability across large regions that is spatially explicit (i.e., mapped) tends to be general and qualitative. We used spatial predictions from gradient models to examine the influence of environment, disturbance, and ownership on patterns of forest vegetation biodiversity across a large forested region, the 3-million-ha Oregon Coast Range (USA). Gradients in tree species composition were strongly associated with environment, especially climate, and insensitive to disturbance, probably because many dominant tree species are long-lived and persist throughout forest succession. In contrast, forest structure was strongly correlated with disturbance and only weakly with environmental gradients. Although forest structure differed among ownerships, differences were blurred by the presence of legacy trees that originated prior to current forest management regimes. Our multi-ownership perspective revealed biodiversity concerns and benefits not readily visible in single-ownership analyses, and all ownerships contributed to regional biodiversity values. Federal lands provided most of the late-successional and old-growth forest. State lands contained a range of forest ages and structures, including diverse young forest, abundant legacy dead wood, and much of the high-elevation true fir forest. Nonindustrial private lands provided diverse young forest and the greatest abundance of hardwood trees, including almost all of the foothill oak woodlands. Forest industry lands encompassed much early-successional forest, most of the mixed hardwood-conifer forest, and large amounts of legacy down wood. The detailed tree- and species-level data in the maps revealed regional trends that would be masked in traditional coarse-filter assessment. Although abundant, most early-successional forests originated after timber harvest and lacked legacy live and dead trees important as habitat and for other ecological functions. Many large-conifer forests that might be classified as old growth using a generalized forest cover map lacked structural features of old growth such as multilayered canopies or dead wood. Our findings suggest that regional conservation planning include all ownerships and land allocations, as well as fine-scale elements of vegetation composition and structure.     

铜胁迫对两种地衣植物生理生化特征的影响

以中国树花（Ramalina sinensis Jatta.）和亚花松萝（Usnea subfloridana Stint.）为材料,研究了铜胁迫对这两种地衣植物生理生化特性的影响。结果表明：在Cu2＋的作用下,中国树花和亚花松萝体内叶绿素质量分数和过氧化物酶（POD）活性发生一系列的变化,且表现出明显的剂量效应关系和时间效应关系。随着处理浓度的加大和处理时间的延长,中国树花体内叶绿素质量分数呈现先降后升再降。在处理的48 h,当Cu2＋质量浓度为0.1 mg.mL-1时中国树花体内叶绿素a质量分数下降为0 mg.mL-1时的16.34%,叶绿素总质量分数下降为42.54%,而当Cu2＋质量浓度为0.5 mg.mL-1时叶绿素a质量分数下降为22.95%,叶绿素总质量分数下降为60.39%,亚花松萝体内叶绿素质量分数呈现先升后降的趋势,当Cu2＋质量浓度为0.1 mg.mL-1时,处理48 h后的亚花松萝体内叶绿素质量分数比36 h下降18.82%;当Cu2＋质量浓度为0.5 mg.mL-1时,处理48 h后的亚花松萝体内叶绿素质量分数比36 h下降23.52%。随着处理浓度的加大和处理时间的延长,中国树花过氧化物酶活性呈现上升的趋势,当Cu2＋质量浓度为0.1 mg.mL-1时,处理24、36、48 h后过氧化物酶的活性分别增加为88.1%、64.83%和65.49%;当Cu2＋质量浓度为0.5 mg.mL-1时,分别增加为69.83%、82.05%和82.57%。而亚花松萝过氧化物酶活性呈现先下降后上升等波动性变化,Cu2＋质量浓度为0.1 mg.mL-1时,处理24、36、48 h后过氧化物酶的活性先下降62.56%,后增加7.93%,又下降42.28%;当Cu2＋质量浓度为0.5 mg.mL-1时,比对照组分别下降72.92%、33.49%和62.56%。对比两种地衣植物发现,中国树花体内生理指标的变化较亚花松萝的明显,说明中国树花对铜胁迫反应较敏感,有利于监测重金属铜污染。     

Spatially explicit modeling of overstory manipulations in young forests: Effects on stand structure and light

Young forests can be manipulated in diverse ways to enhance their ecological values. We used stem maps from two dense, second-growth stands in western Washington and a spatially explicit light model (tRAYci) to simulate effects of five silvicultural manipulations on diameter distribution, species composition, spatial patterning, and light availability. Each treatment removed 30% of the basal area, but differed in how trees were selected for removal. Three primary treatments were thin from below (removing the smallest trees), random thin (removing trees randomly), and gap creation (removing all trees in circles ∼1 tree height in diameter). Two additional treatments combined elements of these approaches: random ecological thin (a mixture of thin from below and random thin) and structured ecological thin (a mixture of thin from below and gap creation).     

植物生理生态特性对人工湿地脱氮效果的影响

人工湿地污水处理系统中,植物对脱氮效果起着非常重要的作用.为了明确人工湿地植物生理生态特性对脱氮效果的影响,藉此优选高效耐寒的湿地植物,进而提出可行的强化脱氮措施,在大量试验的基础上,详细测定了芦苇、美人蕉等典型湿地植物在不同生长条件下对湿地脱氮效果、溶解氧分布状态的影响,以及植物光合、蒸腾特性对湿地脱氮效果的影响.结果表明:在本试验范围内,芦苇、美人蕉湿地脱氮效果最佳;茶花湿地低温条件下运行稳定.植物净光合速率与溶解氧分布、总氮和氨氮去除率显著正相关,而植物蒸腾速率与湿地氨氮去除率显著相关.适当增加植物种植密度有利于提高人工湿地脱氮效果,但种植过密对提高溶解氧水平和总氮去除率反而不利.植物生长周期对湿地脱氮影响显著,植物收割方式对脱氮效果影响较大,清除植物地上茎叶既不破坏植物根区微环境,可有效防止茎叶腐烂向系统重新释氮.此外,由于湿地前端溶解氧水平急剧下降,故建议适当增加前端植物种植密度.     

Influence of carbon source and temperature on the denitrifying phosphorus removal process

To supply the valuable operating parameters for the popular usage of the new denitrifying phosphors removal process, it is essential to study the dominant biochemical reactions and the characteristics of denitrifying phosphorus removing bacteria (DPB). Thus, parallel batch experiments using DPB sludge were carried out to assess the effect of substrates (sewage, HAc, and endogenous carbon source) on denitrifying dephosphorus removal efficiency in this study. The results showed that the initial specific phosphorus release rate increased with the high concentration of the short-chain volatile fatty acids ratio in the influent, and sufficient phosphorus was released by DPB. This improved the subsequent denitrification and phosphorus uptake efficiency. The specific endogenous denitrification mainly relies on the internal carbon source (PHB) stored by poly-P bacteria. Denitrifying phosphorus removing bacteria were very hungry when the internal PHB was consumed. Consequently, the specific endogenous denitrification rate was low and the phosphorus uptake did not happen. On the other hand, in the experiment, the denitrifying phosphorus removal performance under two temperature conditions (8–10°C and 25–26°C) was also investigated and analyzed. It was found that the lower temperature decreased the specific phosphorus release and uptake rate, but did not inhibit the denitrifying phosphorus removal completely. Therefore, the negative influence of the low temperature on the overall phosphorus removal was not significant.     

Cumulative ecological and socioeconomic effects of forest policies in coastal Oregon.

Forest biodiversity policies in multi-ownership landscapes are typically developed in an uncoordinated fashion with little consideration of their interactions or possible unintended cumulative effects. We conducted an assessment of some of the ecological and socioeconomic effects of recently enacted forest management policies in the 2.3-million-ha Coast Range Physiographic Province of Oregon. This mountainous area of conifer and hardwood forests includes a mosaic of landowners with a wide range of goals, from wilderness protection to high-yield timber production. We projected forest changes over 100 years in response to logging and development using models that integrate land use change and forest stand and landscape processes. We then assessed responses to those management activities using GIS models of stand structure and composition, landscape structure, habitat models for focal terrestrial and aquatic species, timber production, employment, and willingness to pay for biodiversity protection. Many of the potential outcomes of recently enacted policies are consistent with intended goals. For example, we project the area of structurally diverse older conifer forest and habitat for late successional wildlife species to strongly increase. 'Other outcomes might not be consistent with current policies: for example, hardwoods and vegetation diversity strongly decline within and across owners. Some elements of biodiversity, including streams with high potential habitat for coho salmon (Oncorhynchus kisutch) and sites of potential oak woodland, occur predominately outside federal lands and thus were not affected by the strongest biodiversity policies. Except for federal lands, biodiversity policies were not generally characterized in sufficient detail to provide clear benchmarks against which to measure the progress or success. We conclude that land management institutions and policies are not well configured to deal effectively with ecological issues that span broad spatial and temporal scales and that alternative policies could be constructed that more effectively provide for a mix of forest values from this region.     

Forest dynamics in Oregon landscapes: evaluation and application of an individual-based model.

The FORCLIM model of forest dynamics was tested against field survey data for its ability to simulate basal area and composition of old forests across broad climatic gradients in western Oregon, USA. The model was also tested for its ability to capture successional trends in ecoregions of the west Cascade Range. It was then applied to simulate present and future (1990-2050) forest landscape dynamics of a watershed in the west Cascades. Various regimes of climate change and harvesting in the watershed were considered in the landscape application. The model was able to capture much of the variation in forest basal area and composition in western Oregon even though temperature and precipitation were the only inputs that were varied among simulated sites. The measured decline in total basal area from tall coastal forests eastward to interior steppe was matched by simulations. Changes in simulated forest dominants also approximated those in the actual data. Simulated abundances of a few minor species did not match actual abundances, however. Subsequent projections of climate change and harvest effects in a west Cascades landscape indicated no change in forest dominance as of 2050. Yet, climate-driven shifts in the distributions of some species were projected. The simulation of both stand-replacing and partial-stand disturbances across western Oregon improved agreement between simulated and actual data. Simulations with fire as an agent of partial disturbance suggested that frequent fires of low severity can alter forest composition and structure as much or more than severe fires at historic frequencies.     

Moss harvest truncates the successional development of epiphytic bryophytes in the Pacific Northwest.

We evaluated the impact of commercial moss harvest on the development of an understory epiphyte community in the Pacific Northwest by characterizing natural development stages using data from both a long-term regrowth study and demographic sampling. First, experimentally stripped 1 m long cylindrats on 46 shrub stems in the Oregon Coast Range were monitored for species composition and abundance annually during the first five years of recovery and again in year 10. Second, a pathway of community development was inferred by examining the relative species composition and abundance of epiphytic species present in moss mats in a four-stage chronosequence. We (1) characterized the change in richness and composition from year 1 through 10 of regrowth following experimental disturbance, (2) quantified the proportion of approximately 1-, 10-, 25-, and 50-year-old moss mats of commercially harvestable species that were monodominant, diverse, and late successional, and (3) contrasted these proportions with estimates from a compositional transition matrix derived from long-term monitoring. Roughly half of the observed moss mats demonstrated neutral dynamics and were composed of a mixture of readily dispersed acrocarps and pleurocarps. The remaining half exhibited positive dynamics and were dominated by aggressively growing pleurocarpous species such as Isothecium myosuroides. Following structural developmental pathways well established for vascular plants, moss mats shift with time from high diversity and evenness in the initial colonization and extended establishment phases to increasing Isothecium dominance during a presumed competitive-exclusion phase. Old mats exist in alternate states of either Isothecium dominance or mixed composition, either of which may have late-successional species. Patchy historic commercial moss harvest likely facilitated high diversity by increasing the simultaneous occurrence of all moss mat age classes, while modern strip harvesting methods are predicted to promote predominantly even-aged mats that are unlikely to reach "old-growth" conditions before re-harvest.     

Influences of canopy structure and physiological traits on flux partitioning between understory and overstory in an eastern Siberian boreal larch forest

Boreal forests play an important role in the global balance of energy and CO₂. Our previous study of elaborate eddy covariance observations in a Siberian boreal larch forest, conducted both above the forest canopy and at the forest floor, revealed a significant contribution of latent heat flux (LE) from the cowberry understory to the whole ecosystem LE. Thus, in the present study, we examined what factors control the partitioning of whole ecosystem LE and CO₂ flux into the understory and overstory vegetation, using detailed leaf-level physiology (for both understory and overstory vegetation) and soil respiration property measurements as well as a multilayer soil-vegetation-atmosphere transfer (SVAT) model. The modeling results showed that the larch overstory's leaf area index (LAI) and vertical profile of leaf photosynthetic capacity were major factors determining the flux partitioning in this boreal forest ecosystem. This is unlike other forest ecosystems that tend to have dense LAI. We concluded that control of the larch overstory's LAI had a relationship with both the coexistence of the larch with the cowberry understory and with the water resources available to the total forest ecosystem.     

Counterintuitive density-dependent growth in a long-lived vertebrate after removal of nest predators

Examining the phenotypic and genetic underpinnings of life-history variation in long-lived organisms is central to the study of life-history evolution. Juvenile growth and survival are often density dependent in reptiles, and theory predicts the evolution of slow growth in response to low resources (resource-limiting hypothesis), such as under densely populated conditions. However, rapid growth is predicted when exceeding some critical body size reduces the risk of mortality (mortality hypothesis). Here we present results of paired, large-scale, five-year field experiments to identify causes of variation in individual growth and survival rates of an Australian turtle (Emydura macquarii) prior to maturity. To distinguish between these competing hypotheses, we reduced nest predators in two populations and retained a control population to create variation in juvenile density by altering recruitment levels. We also conducted a complementary split-clutch field-transplant experiment to explore the impact of incubation temperature (25 degrees or 30 degrees C), nest predator level (low or high), and clutch size on juvenile growth and survival. Juveniles in high-recruitment (predator removal) populations were not resource limited, growing more rapidly than young turtles in the control populations. Our experiments also revealed a remarkably long-term impact of the thermal conditions experienced during embryonic development on growth of turtles prior to maturity. Moreover, this thermal effect was manifested in turtles approaching maturity, rather than in turtles closer to hatching, and was dependent on population density in the post-hatching rearing environment. This apparent phenotypic plasticity in growth complements our observation of a strong, positive genetic correlation between individual body size in the experimental and control populations over the first five years of life (rG - +0.77). Thus, these Australian pleurodiran turtles have the impressive capacity to acclimate plastically to major demographic perturbations and enjoy the longer-term potential to evolve adaptively to maintain viability.     

Quantifying dispersal and establishment limitation in a population of an epiphytic lichen

Dispersal is a process critical for the dynamics and persistence of metapopulations, but it is difficult to quantify. It has been suggested that the old-forest lichen Lobaria pulmonaria is limited by insufficient dispersal ability. We analyzed 240 DNA extracts derived from snow samples by a L. pulmonaria-specific real-time PCR (polymerase chain reaction) assay of the ITS (internal transcribed spacer) region allowing for the discrimination among propagules originating from a single, isolated source tree or propagules originating from other locations. Samples that were detected as positives by real-time PCR were additionally genotyped for five L. pulmonaria microsatellite loci. Both molecular approaches demonstrated substantial dispersal from other than local sources. In a landscape approach, we additionally analyzed 240 snow samples with real-time PCR of ITS and detected propagules not only in forests where L. pulmonaria was present, but also in large unforested pasture areas and in forest patches where L. pulmonaria was not found. Monitoring of soredia of L. pulmonaria transplanted to maple bark after two vegetation periods showed high variance in growth among forest stands, but no significant differences among different transplantation treatments. Hence, it is probably not dispersal limitation that hinders colonization in the old-forest lichen L. pulmonaria, but ecological constraints at the stand level that can result in establishment limitation. Our study exemplifies that care has to be taken to adequately separate the effects of dispersal limitation from a limitation of establishment.     

不同水深条件下狐尾藻生长对沉积物氮磷的影响

采用巢湖原位试验研究了80、160和240 cm 3个水深条件下生长的沉水植物狐尾藻(Myriophyllum spicatum L.)对沉积物和间隙水中氮磷的影响。结果表明,狐尾藻的株高和生物量随着水深的增加总体呈下降趋势,并且其差异随着生长期的延长而加大,水深为240 cm的条件下狐尾藻具有最小的株高和生物量,即240 cm的大水深条件不利于狐尾藻的个体形态构建;而相对浅的水深条件(80和160 cm)则是其生长的较佳生境。狐尾藻的生长过程中能够通过根系吸收和根际环境的改变使沉积物和间隙水中的氮磷含量明显下降,一定程度上降低了沉积物氮磷向上覆水体释放的风险,并且其抑制能力随着不同水深条件下植株的长势不同而有所差异,即在植株生长良好的浅水条件下其对沉积物和间隙水中氮磷的抑制效果更佳。因此,较浅的水环境有利于沉水植物的生长,同时还能充分发挥植物对沉积物氮磷的控释作用。     

Population structure and growth of Donax trunculus (Bivalvia: Donacidae) in the western Mediterranean

A comparison of shell growth in Donax trunculus (collected between 1988 and 1990 of Cullera, Spain) has been carried out using an analysis of cohort progression in monthly length frequency distributions, hyaline surface shell growth rings and internal microgrowth bands. In the Mediterranean there are two periods of recruitment of D. trunculus, one in the summer (July to September) and the other in winter (December to February). Clams recruited to the population in winter display a clear cessation in shell growth during the following summer which may possibly be correlated with spawning, whereas individuals of the summer recruited cohort show no growth cessation the following summer and continue to deposit shell during this period. The normally opaque shell of D.trunculus reveals the presence of translucent hyaline growth rings when the shells are backlit by a strong light source, and these have been shown to be laid down in the shell during summer months. Formation of a hyaline ring is accompanied by a narrowing of the microgrowth patterns present in shell sections. Both the hyaline rings and the length frequency distributions have been used to determine the age and growth rate of D. trunculus.     

Heavy metals contents of roadside mosses in the northern and south-eastern regions of Nigeria

Levels of lead, zinc, cadmium, copper and nickel were determined in roadside moss samples within towns in the northern and south-eastern regions of Nigeria. Average lead level in the south-east (59 ppm) was higher than the average for the northern region (44 ppm). Average levels of zinc, cadmium, copper and nickel did not differ significantly between the two regions, with overall averages for the entire study area being 50.9, 1.2, 11.3 and 5.6 ppm for these metals. Lead levels were poorly correlated with those of the other metals, indicating that automobile emissions may not be the main source for these metals in the moss. In comparison with a previous study of the south-west region, the results indicate a generally slightly higher level of metal pollution in the south-west region than in both the northern and south-eastern regions.