A native species-based index of biological integrity for Hawaiian stream environments

Based upon ecological data provided by a 6-year study of native species assemblage structure and function in near-pristine Limahuli Stream (Kauai), The Hawaii Stream Index of Biological Integrity (HS-IBI) incorporates 11 metrics covering five ecological categories (taxonomic richness, sensitive species, reproductive capacity, trophic–habitat capacity, and tolerance capacity). The HS-IBI was shown to effectively distinguish stream biological condition on a continuum from undisturbed (near-pristine) to severely impaired in sampling of 39 sites (6 estuarine reaches) on 18 Hawaiian streams located on all major islands. A significant relationship was validated between relative levels of human impact occurring within-watersheds (determined through use of a landscape indicator) and IBI ratings with metrics responding predictably to gradients of human influence. For management interpretation of HS-IBI results, a framework comprised of five “integrity classes” (excellent–good–fair–poor–impaired) is provided which can be used to operationalize HS-IBI results obtained through standardized sampling of stream sites that “…translates into a verbal and visual portrait of biological condition.” Through its focus on native species, the HS-IBI incorporates evolutionary and biogeographic variation for the region with biological expectations based upon reference condition benchmarks established in near-pristine stream environments where ecological functioning is naturally self-sustaining and resilient to normal environmental variation. The methods and tools described in this study are appropriate for application in all perennial streams in Hawaii and may be adapted for use in streams on other tropical Pacific islands where native species assemblages persist in near-pristine stream environments.     

Multiscale Spatial and Small-Scale Temporal Variation in the Composition of Riverine Fish Communities

We studied the multiscale (sites, river reaches and rivers) and short-term temporal (monthly) variability in a freshwater fish assemblage. We found that small-scale spatial variation and short-term temporal variability significantly influenced fish community structure in the Macquarie and Namoi Rivers. However, larger scale spatial differences between rivers were the largest source of variation in the data. The interaction between temporal change and spatial variation in fish community structure, whilst statistically significant, was smaller than the variation between rivers. This suggests that although the fish communities within each river changed between sampling occasions, the underlying differences between rivers were maintained. In contrast, the strongest interaction between temporal and spatial effects occurred at the smallest spatial scale, at the level of individual sites. This means whilst the composition of the fish assemblage at a given site may fluctuate, the magnitude of these changes is unlikely to affect larger scale differences between reaches within rivers or between rivers. These results suggest that sampling at any time within a single season will be sufficient to show spatial differences that occur over large spatial scales, such as comparisons between rivers or between biogeographical regions.     

Spatio-temporal variability of solid, total dissolved and labile metal: passive vs. discrete sampling evaluation in river metal monitoring

In order to obtain representative dissolved and solid samples from the aquatic environment, a spectrum of sampling methods are available, each one with different advantages and drawbacks. This article evaluates the use of discrete sampling and time-integrated sampling in illustrating medium-term spatial and temporal variation. Discrete concentration index (CI) calculated as the ratio between dissolved and solid metal concentrations in grab samples are compared with time-integrated concentration index (CI) calculated from suspended particulate matter (SPM) collected in sediment traps and labile metals measured by the diffusive gel in thin films (DGT) method, collected once a month during one year at the Seine River, upstream and downstream of the Greater Paris Region. Discrete CI at Bougival was found to be significantly higher than at Triel for Co, Cu, Mn, Ni and Zn, while discrete metal partitioning at Marnay was found to be similar to Bougival and Triel. However, when using time-integrated CI, not only was Bougival CI significantly higher than Triel CI, CI at Marnay was also found to be significantly higher than CI at Triel which was not observed for discrete CI values. Since values are time-averaged, dramatic fluctuations were smoothed out and significant medium-term trends were enhanced. As a result, time-integrated concentration index (CI) was able to better illustrate urbanization impact between sites when compared to discrete CI. The impact of significant seasonal phenomenon such as winter flood, low flow and redox cycles was also, to a certain extent, visible in time-integrated CI values at the upstream site. The use of time-integrated concentration index may be useful for medium- to long-term metal studies in the aquatic environment.     

Monitoring nekton as a bioindicator in shallow estuarine habitats

Long-term monitoring of estuarine nekton has many practical and ecological benefits but efforts are hampered by a lack of standardized sampling procedures. This study provides a rationale for monitoring nekton in shallow (<#60; 1 m), temperate, estuarine habitats and addresses some important issues that arise when developing monitoring protocols. Sampling in seagrass and salt marsh habitats is emphasized due to the susceptibility of each habitat to anthropogenic stress and to the abundant and rich nekton assemblages that each habitat supports. Extensive sampling with quantitative enclosure traps that estimate nekton density is suggested. These gears have a high capture efficiency in most habitats and are small enough (e.g., 1 m²) to permit sampling in specific microhabitats. Other aspects of nekton monitoring are discussed, including spatial and temporal sampling considerations, station selection, sample size estimation, and data collection and analysis. Developing and initiating long-term nekton monitoring programs will help evaluate natural and human-induced changes in estuarine nekton over time and advance our understanding of the interactions between nekton and the dynamic estuarine environment.     

An urban observatory for quantifying phosphorus and suspended solid loads in combined natural and stormwater conveyances

Water quality in urban streams and stormwater systems is highly dynamic, both spatially and temporally, and can change drastically during storm events. Infrequent grab samples commonly collected for estimating pollutant loadings are insufficient to characterize water quality in many urban water systems. In situ water quality measurements are being used as surrogates for continuous pollutant load estimates; however, relatively few studies have tested the validity of surrogate indicators in urban stormwater conveyances. In this paper, we describe an observatory aimed at demonstrating the infrastructure required for surrogate monitoring in urban water systems and for capturing the dynamic behavior of stormwater-driven pollutant loads. We describe the instrumentation of multiple, autonomous water quality and quantity monitoring sites within an urban observatory. We also describe smart and adaptive sampling procedures implemented to improve data collection for developing surrogate relationships and for capturing the temporal and spatial variability of pollutant loading events in urban watersheds. Results show that the observatory is able to capture short-duration storm events within multiple catchments and, through inter-site communication, sampling efforts can be synchronized across multiple monitoring sites.     

Industrial air pollution by metals monitored by a synthetic fabric: A case study of a community

To supplement an epidemiological investigation into respiratory cancer, a synthetic fabric called tak was used to study the deposition of atmospheric metal pollution within the town of Armadale, central Scotland. Pollution maps showed high concentrations of several metals in areas close to the town's steel foundry and in a second area in the north of the town. Through further statistical analyses, those metals were identified which had probably been emitted by the foundry, and temporal variations in metal deposition patterns were examined. The advantages of this method of low technology sampling, which include the low cost and a high density of sampling sites, are described.     

Limitations of habitats as biodiversity surrogates for conservation planning in estuaries

Increasing pressures on global biodiversity and lack of data on the number and abundance of species have motivated conservation planners and researchers to use more readily available information as proxies or surrogates for biodiversity. “Habitat” is one of the most frequently used surrogates but its assumed value in marine conservation planning is not often tested. The present study developed and tested three alternative habitat classification schemes of increasing complexity for a large estuary in south-east Australia and tested their effectiveness in predicting spatial variation in macroinvertebrate biodiversity and selecting estuarine protected areas to represent species. The three habitat classification schemes were: (1) broad-scale habitats (e.g., mangroves and seagrass), (2) subdivision of each broad-scale habitat by a suite of environmental variables that varied significantly throughout the estuary, and (3) subdivision of each broad-scale habitat by the subset of environmental variables that best explained spatial variation in macroinvertebrate biodiversity. Macroinvertebrate assemblages differed significantly among the habitats in each classification scheme. For each classification scheme, habitat richness was significantly correlated with species richness, total density of macroinvertebrates, assemblage dissimilarity, and summed irreplaceability. However, in a reserve selection process designed to represent examples of each habitat, no habitat classification scheme represented species significantly better than a random selection of sites. Habitat classification schemes may represent variation in estuarine biodiversity; however, the results of this study suggest they are inefficient in designing representative networks of estuarine protected areas.     

Ambient toxicity due to chlorpyrifos and diazinon in a central California coastal watershed

The Salinas River watershed along the central coast of California, U.S.A., supports rapidly growing urban areas and intensive agricultural operations. The river drains to an estuarine National Wildlife Refuge and a National Marine Sanctuary. The occurrence, spatial patterns, sources and causesof aquatic toxicity in the watershed were investigated by sampling four sites in the main river and four sites in representative tributaries during 15 surveys between September1998 and January 2000. In 96 hr toxicity tests, significant Ceriodaphnia dubia mortality was observed in 11% of the mainriver samples, 87% of the samples from a channel draining anurban/agricultural watershed, 13% of the samples fromchannels conveying agricultural tile drain runoff, and in 100% of the samples from a channel conveying agricultural surface furrow runoff. In six of nine toxicity identificationevaluations (TIEs), the organophosphate pesticides diazinon and/or chlorpyrifos were implicated as causes of observed toxicity, and these compounds were the most probable causes oftoxicity in two of the other three TIEs. Every sample collectedin the watershed that exhibited greater than 50% C. dubia mortality (n = 31) had sufficient diazinon and/or chlorpyrifos concentrations to account for the observed effects.Results are interpreted with respect to potential effects on other ecologically important species.     

Effective Long-term Ecological Monitoring Using Spatially and Temporally Nested Sampling

Effective environmental management requires documentation of ecosystem status and changes to that status. Without long-term data, short-term natural variability can mask chronic and/or cumulative impacts, often until critical levels are reached. However, a trade-off generally occurs between sampling in space and time. This study analyses a spatially and temporally nested long-term (12 years) monitoring programme conducted on benthic macrofauna in a large harbour. Sampling was carried out at six sites for 5.5 years, after which only two sites were sampled for the next 5 years. After this period, all six sites were sampled for another 2 years. While ecology is frequently thought of being highly variable, this design was able to detect trends, and cycles, in abundance, with only around 10% of species at each site exhibiting unpredictable temporal variability. Sites exhibiting similar trends in the abundance of a species over the 12.5-year period were generally spatially contiguous, and the spatial scale of change could be assessed. Continuous sampling at two sites identified whether changes in unsampled sites were related to long-term cycles. Moreover, this sampling provided a long-term background of temporal fluctuations against which to assess the ecological significance of observed changes.     

Estuarine Macrobenthic Community Structure in the Hawkesbury River, Australia: Relationships with Sediment Physicochemical and Anthropogenic Parameters

Macrobenthic community assemblage diversity and abundance were monitored on both Cowan and Berowra Creeks in the estuarine reaches of the Hawkesbury River, Sydney Australiaduring 1997–1998. Natural sediment physicochemical differenceswere assessed, along with low-level anthropogenic contaminantsincluding copper, lead, zinc, phosphorus and nitrogen. Contaminant levels at all sites were below sediment guidelinevalues for biological effects. Natural physicochemical sedimentdifferences were the main determinants in species assemblage patterns among sites. Three groupings of sites with similar assemblages were observed during February 1998. Berowra Creek sites, which were higher in organic content and silt/clay (andthus metals and nutrients), higher in pH and lower in salinity,were similar in terms of contributions by the polychaetes Ceratoneresis aequisetis, Scoloplos normalis, the isopod Cyathura hakea and the bivalve mollusc Soletellina alba.Sites on upper Cowan Creek, higher in organic content, silt/clay(nutrients and metals) and lower in salinity, were similar andseparated from other sites in terms of the polychaete Carazziella victoriensis and the gastropod mollusc Nassarius jonasii. Sites lower in Cowan Creek, tended to be higher in sand content, more saline and lower in organic contentand thus nutrient and metal concentrations. These sites were similar in terms of contributions of the polychaete Sigalion bandaensis and the bivalve molluscs, Mysella vitrea and Tellina deltoidalis. The biotic assemblage patterns were not maintained temporally, suggesting the importance of monitoring over time to assess possible futureimpacts. Aggregating species data to the family level resultedin similar site discrimination. Site differences were less distinct at higher taxonomic levels and suggests future monitoring at the family level is sufficient to detect assemblage differences among sites. The results obtained represent the difficulty in detecting responses to low-levelcontamination at the community level, and provide a sound anticipatory baseline for the assessment of future possible anthropogenic disturbance in the Hawkesbury River.     

上海市黄浦江表层沉积物重金属污染评价

用沉积物富集系数法和Hakanson潜在生态风险评估法对上海市黄浦江表层沉积物重金属含量进行了评价。结果显示,沉积物中Cd、As和Pb含量富集程度较低,Hg和Cu含量富集程度较高;其分布特征为上游段含量相对较轻,到中游段有所上升,至下游段含量又有所下降,整体呈钟型分布,重金属含量分布规律可能与苏州河对黄浦江下游沉积物的影响和黄浦江中游段有工业污染排放输入有关;河口与内陆河流沉积物中重金属含量存在差异性,河口重金属含量明显下降;调查区37.5%的断面Hg含量潜在生态危害为中等;沉积物富集系数法可用来评价重金属累积程度,而潜在生态风险指数则突出对生物有很强毒性的重金属作用。     

Sampling state and process variables on coral reefs

Contemporary coral reefs are forced to survive through and recover from disturbances at a variety of spatial and temporal scales. Understanding disturbances in the context of ecological processes may lead to accurate predictive models of population trajectories. Most coral-reef studies and monitoring programs examine state variables, which include the percentage coverage of major benthic organisms, but few studies examine the key ecological processes that drive the state variables. Here we outline a sampling strategy that captures both state and process variables, at a spatial scale of tens of kilometers. Specifically, we are interested in (1) examining spatial and temporal patterns in coral population size-frequency distributions, (2) determining major population processes, including rates of recruitment and mortality, and (3) examining relationships between processes and state variables. Our effective sampling units are randomly selected 75 × 25 m stations, spaced approximately 250?C500 m apart, representing a 10³ m spatial scale. Stations are nested within sites, spaced approximately 2 km apart, representing a 10⁴ m spatial scale. Three randomly selected 16 m² quadrats placed in each station and marked for relocation are used to assess processes across time, while random belt-transects, re-randomized at each sampling event, are used to sample state variables. Both quadrats and belt-transects are effectively sub-samples from which we will derive estimates of means for each station at each sampling event. This nested sampling strategy allows us to determine critical stages in populations, examine population performance, and compare processes through disturbance events and across regions.     

京杭运河苏州市区段大型底栖动物种群结构特征与评价

对京杭运河苏州市区段4个点位进行了底栖动物群落结构和多样性进行多年研究,并进行了水质评价。结果表明,底栖动物共12种,寡毛类的克拉泊水丝蚓为各点位的优势种;从时间尺度来看,S1点位的物种种类数量从2008年开始明显增加,软体类物种出现,种群密度也在增加,生物污染指数下降,水质明显改善;从空间尺度来看,京杭运河苏州市区段上游和中游物种种类数量要多于下游和老运河城区段,下游水质有所下降。     

Analysis of polycyclic aromatic hydrocarbons in tree-rings of Masson pine (Pinus massoniana L.) from two industrial sites in the Pearl River Delta, south China

Concentrations of polycyclic aromatic hydrocarbons (PAHs) were examined and potential sources of PAHs were identified from the dated tree-rings of Masson pine (Pinus massoniana L.) near two industrial sites (Danshuikeng, DSK and Xiqiaoshan, XQS) in the Pearl River Delta of south China. Total concentrations of PAHs (∑PAHs) were revealed with similar patterns of temporal trends in the tree-rings at both sites, suggesting tree-rings recorded the historical variation in atmospheric PAHs. The differences of individual PAHs and of ∑PAHs detected in the tree-rings between the two sites reflected the historical differences of airborne PAHs. Regional changes in industrial activities might contribute to the site-specific and period-specific patterns of the tree-ring PAHs. The diagnostic PAH ratios of Ant/(Ant + PA), FL/(FL + Pyr), and BaA/(BaA + Chr)) revealed that PAHs in the tree-rings at both sites mainly stemmed from the combustion process (pyrogenic sources). Principal component analysis further confirmed that wood burning, coal combustion, diesel, and gasoline-powered vehicular emissions were the dominant contributors of PAHs sources at DSK, while diesel combustion, gasoline and natural gas combustion, and incomplete coal combustion were responsible for the main origins of PAHs at XQS. Tree-ring analysis of PAHs was indicative of PAHs from a mixture of sources of combustion, thus minimizing the bias of short-term active air sampling.     

Seasonal and Interannual Variations in the Frequency and Severity of Deformities in Larvae of Chironomus riparius (Meigen, 1804) and Prodiamesa olivacea (Meigen, 1818) (Diptera, Chironomidae) collected in a polluted site

Larvae of Chironomus riparius and Prodiamesa olivacea were sampled at intervals overthe period November 1993 and October 1995 from theriver Sar in Galicia (N.W. Spain), with the aim ofinvestigating possible temporal variations in thefrequency of deformed individuals and in `Toxic Score'values (Lenat, 1993), a score for severity of theabnormalities calculated for each species. The resultsobtained indicate that, in both species, deformitiesare more frequent during the colder period of theyear. Similarly, Toxic Score values are higher duringthis period. These finding suggest that studies usingchironomid larvae as indicators of contaminationsshould involve sampling over an extended period, tominimize the influence of temporal variation.     

Dissolved organic iodine in marine waters: role in the estuarine geochemistry of iodine

Non-volatile dissolved organic iodine (DOI) can be a major, or even the dominant, species of dissolved I in coastal, inshore and estuarine waters. It can be converted to IO3- in the presence of an oxidizing agent and to I- by reacting it with a reducing agent. Depending on the exact experimental conditions, the yields of these reactions may not be quantitative. In previous analytical schemes for the determination of IO3-, I- and DOI in marine waters, if oxidation or reduction steps are involved and the concentrations of one or more species are estimated by difference, the presence of DOI can lead to an overestimation of the concentrations of the inorganic species determined by difference and an underestimation of the concentration of DOI. In two cruises covering the James River to the southern Chesapeake Bay and from the southern Chesapeake Bay to the Atlantic, above a salinity (S) of 2, the contribution of DOI to total I increased with decreasing salinity and reached a maximum of 80%. DOI, I- and IO3- were successively the dominant form of dissolved I at 0.1 < S < 15 in the James River estuary, 15 < S < 30 in the Southern Chesapeake Bay and S > 30 in the Atlantic Ocean at the Bay mouth, respectively. Total I behaved conservatively (i.e., no evidence of consumption or production) during estuarine mixing during both cruises. In the southern Chesapeake Bay, total inorganic I was also approximately conservative. The primary process affecting the speciation of dissolved I was the conversion of IO3- to I-. In the James River estuary, there were indications of the conversion of both IO3- and I- to DOI. The concentrations of total I, IO3-, I- and DOI in James River water were 0.121, undetectable, 0.068 and 0.053 microM, respectively. These concentrations of total I and I- are significantly higher while that of IO3- is noticeably lower than those used presently for estimating global riverine input of these I species to the oceans. The riverine flux of DOI to the oceans is presently unknown.     

Monitoring and estimating scale-dependent hierarchical relationships between Sicyopterus japonicus density and stream habitat features in different seasons in northern Taiwan

Biological and physical processes operate collaboratively through spatial or temporal scales to form ecological patterns, which are considered as a key element for understanding the natural liens within an ecosystem. Given the importance of scaling in ecological inference, this study elucidates how physical and biological variables under or within scales interact with each other. Density of Sicyopterus japonicus and environmental variables are examined and quantified at 70 stream sections distributed among 14 reaches in the Datuan stream catchment of northern Taiwan during the fall and winter of 2007, as well as the spring and summer of 2008. Hierarchical linear regression analysis indicates that S. japonicus density and habitat features are related on two levels, i.e., sections within reaches and reaches within streams throughout the year. Moreover, parameter uncertainty is represented by the confidence interval, which is calculated by the variance-covariance matrix of hierarchical linear model (HLM) parameters. According to HLM results, environmental variables at the section level (water depth and current velocity) and the reach level (stream width, water temperature, stream slope, soil erosion index) influence S. japonicus density. Although S. japonicus density varies significantly among reaches and sections within reaches, cross-level interaction may not always influence the distribution, processes and activities of S. japonicus throughout the year. The HLMs of S. japonicus density associated with stream features describe thoroughly multiple processes and the activities of S. japonicus across scales and within scales during different seasons. The annual HLM results represent the overall biological and physical patterns of the Datuan stream annually, explaining why they do not reflect seasonal associations or explain S. japonicus-related activities and environmental features of the stream.     

Trace metal and total suspended solids concentrations in freshwater: the importance of small-scale temporal variation

The temporal variation in the concentrations of particulate trace metals (Cu, Pb and Zn) and total suspended solids (TSS) was examined in three rivers that drain into the Port Jackson estuary, Australia, using a nested, hierarchical sampling design. Sampling was conducted between March and June 1999, under low flow conditions. The sampling design incorporated four temporal scales (hours, days, weeks and months). It was considered that hours, days, weeks and months were representative of such time scales and could be analyzed as random, nested sources of variation in an analysis of variance (ANOVA). Significant variation was found at temporal scales ranging from hours, within the same day, to months. The amount and scales of variation differed between particulate trace metals and TSS concentrations and between rivers. In many cases, differences between small-scale were as important as differences between months. The results suggest that higher anthropogenic influences cause higher variability at small temporal scale. Results indicate the need for nested sampling designs to be incorporated into studies of temporal variation in order to unconfound small-scale temporal variation. The conclusions of this study are likely to be applicable to other water quality variables and pollutants.     

Foliar concentrations of volunteer willows growing on polluted sediment-derived sites versus sites with baseline contamination levels

Many alluvial soils along navigable waterways are affected by disposal of dredged sediments or overbank sedimentation and contain metal concentrations that are elevated compared to baseline levels. Uptake patterns for metals and other elements by several volunteer Salix species growing on these sites were determined during a growing season in field plots and compared with the same species growing on soils with baseline contamination levels. For Cd and Zn, foliar concentrations were clearly higher on dredged sediment landfills. Uptake patterns differed significantly between species. A high uptake of Mn and low uptake of Cu, K and S in S. cinerea was attributed to wetland soil chemistry. Site effects on metal uptake were evaluated in more detail for Salix cinerea and S. alba growing on different sediment-derived sites under field conditions. Foliar Cd concentrations were higher in S. cinerea than in S. alba. This appeared to be a genetic feature not influenced by soil chemical properties, as it was observed both on clean sites and polluted sediment-derived sites. For S. cinerea, soil chemistry was reflected in foliar concentrations, while foliar Cd concentrations and bioavailability were found to be independent of the thickness of the polluted horizon. Dredged sediment landfills and freshwater tidal marshes with comparable Cd soil pollution had significantly different foliar Cd concentrations.     

Comprehensive analysis of an ecological risk assessment of the Daliao River estuary, China

At present, most estuarine ecological risk studies are based on terrestrial ecosystem models, which ignore spatial heterogeneity. The Daliao River estuary has representative characteristics of many estuaries in China, and we used this estuary as the study area to formulate an estuarine ecological risk evaluation model. Targeting the estuary's special hydrodynamic condition, this model incorporated variables that were under the influence of human activities and used them as the major factors for partitioning sections of the river according to risk values. It also explored the spatial and temporal distribution laws of estuarine ecological risk. The results showed that, on the whole, the ecological risk of the Daliao River estuary area was relatively high. At a temporal level, runoff was the main factor resulting in differences in ecological risk, while at the spatial level, the ecological risk index was affected by pollutants carried by runoff from upstream, as well as downstream pollution emissions and dilution by seawater at the mouth of the sea. The characteristics of this model make it possible to simulate the spatial and temporal risk distribution in different regions and under different rainfall regimes. This model can thus be applied in other estuarine areas and provides some technical support for analysis and control of ecological destruction in estuary areas.