Bacterial colonization of the phyllosphere of nineteen plant species and antimicrobial activity of their leaf secondary metabolites against leaf associated bacteria

Summary. The scope of this work was to examine whether leaf constitutive secondary metabolites play a role in determining bacterial colonization of the phyllosphere. To this aim, we surveyed nineteen native or cultivated plant species that share a common bacterial pool in a North Mediterranean area, and estimated the size of total and ice nucleation active (INA) bacterial populations on their leaves. Large differences in the colonization of their phyllosphere were found; the population size of epiphytic bacteria ranged from 7.5 × 10² to 1 × 10⁶ CFU/g fresh weight, in eucalypt and celery, respectively. Species native in Mediterranean-type climate areas, particularly those belonging to the group of aromatic plants, are characterized by scarce presence of INA bacteria. The antibacterial activity of essential oils, surface phenolics and leaf tissue extracts was also estimated against the INA strains P. syringae and E. herbicola, isolated from two of these plant species. E. herbicola proved more sensitive than P. syringae. Of the species examined, oregano [Origanum vulgare L. subsp. hirtum (Link.) Ietswaart], an aromatic plant, had the highest antimicrobial activity, whereas six species showed no activity at all. Further experiments were performed with oregano and bean (Phaseolus vulgaris L.) that represent two extremes in their secondary metabolite content. Both plants were inoculated with P. syringae. By the end of incubation, the bacterial population on bean plants was about 100 times higher than that on oregano leaves. Scanning electron micrographs showed that bacterial growth on oregano leaves was confined to sites away from glandular hairs. Results from the bacterial colonization survey together with those from the toxicity tests showed that all species rich in antibacterial secondary metabolites harbored low leaf bacterial populations. These results provide substantial evidence that leaf secondary metabolites function as constitutive defense chemicals against microbial invasions. However, the fact that species with non- or moderately active leaf secondary metabolites are not always highly colonized suggests mediation of other unknown factors, the contribution of which requires further investigation.     

Spatio-temporal patterns in the diversity of demersal fish communities off the south coast of South Africa

The diversity of ecological communities has been the focus of many studies. Because biodiversity provides several indicators used in an Ecosystem Approach to Fisheries (EAF) to track changes in fish communities, we investigated the spatial and temporal patterns in the diversity of some demersal fish communities subjected to varying fishing pressure. Depth and catch rate were the most important predictors in explaining changes in diversity followed by longitude and survey year. Diversity, as measured by the various indices except for taxonomic distinctness (∆*), initially declined with increasing depth to about a depth of 80 m, then increased to about 150 m after which it declined. Taxonomic distinctness index (∆*) showed an increase in the taxonomic heterogeneity of the demersal community below the 300-m isobath. Diversity remained relatively constant with increase in longitude to around 24°E (which has the lowest diversity) after which it increased. The assessment of the temporal trend in diversity indicates that survey year has a significant effect on all diversity indices except for ∆*. Diversity increased and dominance declined with time. This may be result of a decline in the abundance of dominant species or an increase in the abundance less dominant species, or a combination of both effects. Multivariate analysis of the set of diversity indices showed three groups of indices: those reflecting species richness (S, Margalef’s d), those measuring mainly taxonomic relatedness (∆*), and those balancing the richness and evenness components of diversity (J′, H′, λ, ∆, Hill’s N1, and Hill’s N2). The relationship between evenness, catch rate, and size was also investigated. Size classes with highest evenness were found to have lowest catch rate and vice versa. This highlights the need to consider the size and trophic level of species when linking diversity to the functioning of ecosystems.     

Application of temperature gradient gel electrophoresis technique to monitor changes in the structure of the eukaryotic leaf-epiphytic community of <Emphasis Type="Italic">Posidonia oceanica</Emphasis>

Seagrass leaves have been recognized as a suitable substratum in shallow sedimentary environments for the establishment of epiphytic communities. Microscope-based identification of species has been traditionally used to monitor changes in the composition of the eukaryotic leaf-epiphytic community of the seagrass Posidonia oceanica (L.) Delile. Our main goal was to adapt the temperature gradient gel electrophoresis (TGGE) barcoding technique largely used in molecular microbial ecology studies to monitor changes in the composition of P. oceanica epiphytic community. This molecular technique has been successful for handling large amounts of samples in a fast and reproducible manner. To that end, we applied the TGGE technique to study the epiphytic community in two different seasons and compare the results with those provided by the classical microscope approach. The results obtained with both approaches were generally consistent. The complexity of the banding pattern produced by TGGE was mirrored by the taxa richness of the community described using the classical approach. The minimum number of P. oceanica shoots necessary to adequately represent the composition of the eukaryotic leaf-epiphytic community was of the same order of magnitude for both techniques. Partial gene sequences of some selected bands affiliated with sequences of zoo and phytoephytic taxa. Some of them were detected using microscopy. Our results showed that TGGE is an excellent approach for comparative macrobenthic community studies that need parallel treatment of many samples at a time. To the best of our knowledge, this is the first time in which molecular barcoding techniques have been applied to the comparison of eukaryotic epiphytic communities.     

Effects of plant morphology on small-scale distribution of invertebrates

Habitat structure influences organism communities by mediating interactions between individuals and species, affecting abundance and species richness. We examined whether variations in the morphology of soft-bottom plants affect their function as habitat and whether complex structured plants support higher macroinvertebrate abundance and species richness. Three Baltic Sea plant species were studied, together with artificial plants resembling each species. In a field collection, we found higher invertebrate abundance on the morphologically more complex plants Myriophyllum spicatum and Chara baltica than on the structurally simpler plant Potamogeton perfoliatus. In a colonization experiment, we found the highest invertebrate abundance on artificial M. spicatum but found no difference between natural plants. Invertebrate taxon richness displayed no consistent relationship with plant structural complexity. The results imply that plant morphology influences small-scale invertebrate distribution, partly supporting the hypothesis that structurally complex plants harbour higher invertebrate abundance.     

Negative effects of nitrogen deposition on Swiss butterflies

Nitrogen (N) deposition from agriculture and combustion of fossil fuels is a major threat to plant diversity, but its effects on organisms at higher trophic levels are unclear. We investigated how N deposition may affect species richness and abundance (number of individuals per species) in butterflies. We reviewed the peer-reviewed literature on variables used to explain spatial variation in butterfly species richness and found that vegetation variables appeared to be as important as climate and habitat variables in explaining butterfly species richness. It thus seemed likely that increased N deposition could indirectly affect butterfly communities via its influence on plant communities. To test this prediction, we analyzed data from the Swiss biodiversity monitoring program for vascular plants and butterflies in 383 study sites of 1 km² that are evenly distributed throughout Switzerland. The area has a modeled N deposition gradient of 2–44 kg N ha⁻¹ year⁻¹. We used traditional linear models and structural equation models to infer the drivers of the spatial variation in butterfly species richness across Switzerland. High N deposition was consistently linked to low butterfly diversity, suggesting a net loss of butterfly diversity through increased N deposition. We hypothesize that at low elevations, N deposition may contribute to a reduction in butterfly species richness via microclimatic cooling due to increased plant biomass. At higher elevations, negative effects of N deposition on butterfly species richness may also be mediated by reduced plant species richness. In most butterfly species, abundance was negatively related to N deposition, but the strongest negative effects were found for species of conservation concern. We conclude that in addition to factors such as intensified agriculture, habitat fragmentation, and climate change, N deposition is likely to play a key role in negatively affecting butterfly diversity and abundance.     

Effects of Widespread Drought‐Induced Aspen Mortality on Understory Plants

Forest die‐off around the world is expected to increase in coming decades as temperature increases due to climate change. Forest die‐off will likely affect understory plant communities, which have substantial influence on regional biological diversity, ecosystem function, and land–atmosphere interactions, but how die‐off alters these plant communities is largely unknown. We examined changes in understory plant communities following a widespread, drought‐induced die‐off of trembling aspen (Populus tremuloides) in the western United States. We assessed shrub and herbaceous cover and volume in quadrats in 55 plots located across a wide range of levels of aspen mortality. We measured species richness and composition of herbaceous plant communities by recording species presence and absence in 12 sets of paired (1 healthy, 1 dying) aspen plots. Although understory composition in healthy and dying stands was heterogeneous across the landscape, shrub abundance, cover, and volume were higher and abundance of herbaceous species, cover, and volume were lower in dying aspen stands. Shrub cover and volume increased from 2009 to 2011 in dying stands, which suggests that shrub growth and expansion is ongoing. Species richness of herbs declined by 23% in dying stands. Composition of herbs differed significantly between dying and healthy stands. Richness of non‐native species did not differ between stand types. The understory community in dying aspen stands was not similar to other shrub‐dominated plant communities in the region and may constitute a novel community. Our results suggest that changes in understory plant communities as forests die off could be a significant indirect effect of climate change on biological diversity and forest communities. Efectos de la Mortalidad Extensiva de Álamos Inducida por Sequía sobre Plantas del Sotobosque     

Macrophyte species composition and structure along littoral region in relation to limnological variables of a tropical wetland ecosystem

The composition and structure of macrophyte communities of the littoral region of Bhindawas wetland (India) was investigated. Two hypotheses were tested: (1) if limnological variables such as water chemistry and soil parameters are important determinants of species composition and abundance and (2) what is the variance in species richness and composition within the wetland. Twenty-eight macrophyte species belonging to 17 different families were identified with relatively low species diversity and richness (H′?=?2.09; Margalef index?=?1.12). Eichhornia crassipes, attained the highest relative frequency (22.69%), followed by Salvinia natans, Paspalum paspaloides, Phragmites karka, Cynodon dactylon and Cyperus alopecuroides. The first and second axis of CCA ordination explained 38.4% and 28.5% of the total variance of species–limnological variables relationship, respectively. Water-related variables (dissolved oxygen, pH and nitrate concentration) and soil nutrient factors (soil carbon and phosphorus levels) were significantly correlated to macrophyte distribution. Sampling sites formed two distinct groups based on cluster analysis, indicating varying ecological conditions. Generally, composition and abundance of macrophytes evince highly productive nature of the lake, while dominance of invasive species like E. crassipes and S. natans indicates high influence of increased nutrient levels and anthropogenic activities in the catchment on lake macrophyte composition.     

Relative Effects of Disturbance on Red Imported Fire Ants and Native Ant Species in a Longleaf Pine Ecosystem

Abstract: The degree to which changes in community composition mediate the probability of colonization and spread of non‐native species is not well understood, especially in animal communities. High species richness may hinder the establishment of non‐native species. Distinguishing between this scenario and cases in which non‐native species become established in intact (lacking extensive anthropogenic soil disturbance) communities and subsequently diminish the abundance and richness of native species is challenging on the basis of observation alone. The red imported fire ant (Solenopsis invicta), an invasive species that occurs throughout much of the southeastern United States, is such an example. Rather than competitively displacing native species, fire ants may become established only in disturbed areas in which native species richness and abundance are already reduced. We used insecticide to reduce the abundance of native ants and fire ants in four experimental plots. We then observed the reassembly and reestablishment of the ants in these plots for 1 year after treatment. The abundance of fire ants in treated plots did not differ from abundance in control plots 1 year after treatment. Likewise, the abundance of native ants increased to levels comparable to those in control plots after 1 year. Our findings suggest that factors other than large reductions in ant abundance and species density (number of species per unit area) may affect the establishment of fire ants and that the response of native ants and fire ants to disturbance can be comparable.     

Bacterial communities of the marine sponges Hymeniacidon heliophila and Polymastia janeirensis and their environment in Rio de Janeiro, Brazil

In this study we performed a survey of the bacterial communities associated with the Western Atlantic demosponges Hymeniacidon heliophila and Polymastia janeirensis, based on 16S rRNA sequencing and transmission electron microscopy (TEM). We compared diversity and composition of the sponge-associated bacteria to those of environmental bacteria, represented by free-living bacterioplankton and by bacteria attached to organic particulate matter in superficial sediments. Partial bacterial 16S rRNA sequences from seawater, sediment, and sponges were retrieved by PCR, cloning, and sequencing. Sequences were subjected to rarefaction analyses, phylogenetic tree construction, and LIBSHUFF quantitative statistics to verify coverage and similarity between libraries. Community structure of the free-living bacterioplankton was phylogenetically different from that of the sponge-associated bacterial assemblages. On the other hand, some sediment-attached bacteria were also found in the sponge bacterial community, indicating that sponges may incorporate bacteria together with sediment particles. Rare and few prokaryotic morphotypes were found in TEM analyses of sponge mesohyl matrix of both species. Molecular data indicate that bacterial richness and diversity decreases from bacterioplankton, to particulate organic sediment, and to H. heliophila and P. janeirensis. Sponges from Rio de Janeiro harbor a pool of novel and exclusive sponge-associated bacterial taxa. Sponge-associated bacterial communities are composed of both taxons shared by many sponge groups and by species-specific bacteria.     

Habitat biodiversity as a determinant of fish community structure on coral reefs

Increased habitat diversity is often predicted to promote the diversity of animal communities because a greater variety of habitats increases the opportunities for species to specialize on different resources and coexist. Although positive correlations between the diversities of habitat and associated animals are often observed, the underlying mechanisms are only now starting to emerge, and none have been tested specifically in the marine environment. Scleractinian corals constitute the primary habitat-forming organisms on coral reefs and, as such, play an important role in structuring associated reef fish communities. Using the same field experimental design in two geographic localities differing in regional fish species composition, we tested the effects of coral species richness and composition on the diversity, abundance, and structure of the local fish community. Richness of coral species overall had a positive effect on fish species richness but had no effect on total fish abundance or evenness. At both localities, certain individual coral species supported similar levels of fish diversity and abundance as the high coral richness treatments, suggesting that particular coral species are disproportionately important in promoting high local fish diversity. Furthermore, in both localities, different microhabitats (coral species) supported very different fish communities, indicating that most reef fish species distinguish habitat at the level of coral species. Fish communities colonizing treatments of higher coral species richness represented a combination of those inhabiting the constituent coral species. These findings suggest that mechanisms underlying habitat-animal interaction in the terrestrial environment also apply to marine systems and highlight the importance of coral diversity to local fish diversity. The loss of particular key coral species is likely to have a disproportionate impact on the biodiversity of associated fish communities.     

Land‐Cover Change and Avian Diversity in the Conterminous United States

Abstract: Changes in land use and land cover have affected and will continue to affect biological diversity worldwide. Yet, understanding the spatially extensive effects of land‐cover change has been challenging because data that are consistent over space and time are lacking. We used the U.S. National Land Cover Dataset Land Cover Change Retrofit Product and North American Breeding Bird Survey data to examine land‐cover change and its associations with diversity of birds with principally terrestrial life cycles (landbirds) in the conterminous United States. We used mixed‐effects models and model selection to rank associations by ecoregion. Land cover in 3.22% of the area considered in our analyses changed from 1992 to 2001, and changes in species richness and abundance of birds were strongly associated with land‐cover changes. Changes in species richness and abundance were primarily associated with changes in nondominant types of land cover, yet in many ecoregions different types of land cover were associated with species richness than were associated with abundance. Conversion of natural land cover to anthropogenic land cover was more strongly associated with changes in bird species richness and abundance than persistence of natural land cover in nearly all ecoregions and different covariates were most strongly associated with species richness than with abundance in 11 of 17 ecoregions. Loss of grassland and shrubland affected bird species richness and abundance in forested ecoregions. Loss of wetland was associated with bird abundance in forested ecoregions. Our findings highlight the value of understanding changes in nondominant land cover types and their association with bird diversity in the United States.     

Effects of Oil‐Palm Plantations on Diversity of Tropical Anurans

Agriculturally altered vegetation, especially oil‐palm plantations, is rapidly increasing in Southeast Asia. Low species diversity is associated with this commodity, but data on anuran diversity in oil‐palm plantations are lacking. We investigated how anuran biological diversity differs between forest and oil‐palm plantation, and whether observed differences in biological diversity of these areas is linked to specific environmental factors. We hypothesized that biological diversity is lower in plantations and that plantations support a larger proportion of disturbance‐tolerant species than forest. We compared species richness, abundance, and community composition between plantation and forest areas and between site types within plantation and forest (forest stream vs. plantation stream, forest riparian vs. plantation riparian, forest terrestrial vs. plantation terrestrial). Not all measures of biological diversity differed between oil‐palm plantations and secondary forest sites. Anuran community composition, however, differed greatly between forest and plantation, and communities of anurans in plantations contained species that prosper in disturbed areas. Although plantations supported large numbers of breeding anurans, we concluded the community consisted of common species that were of little conservation concern (commonly found species include Fejervarya limnocharis, Microhyla heymonsi, and Hylarana erythrea). We believe that with a number of management interventions, oil‐palm plantations can provide habitat for species that dwell in secondary forests. Efectos de las Plantaciones de Palma de Aceite sobre la Diversidad de Anuros Tropicales Faruk et al.     

Complex patterns of change in the macrobenthos of a large sandbank following dredging

The impact of dredging operations on the marine benthos of a large, subtropical, sublittoral sandbank (Middle Banks, Moreton Bay, Queensland, Australia) was investigated during July and August 1982. Statistical comparisons (ANOVA) of species richness, total abundance, Shannon diversity and Shannon equitability were made with extensive predredging data base. Both the dredged and adjacent areas were investigated. Changes in sediments and the distribution and deposition rates of the dredge plumes were also examined. There were significant decreases (P0.025) in the species richness (from 33.0 to 16.6 mean number of species per site), total abundance (from 117.9 to 47.6 mean number of individuals per site) and Shannon diversity (from 4.03 to 3.22 mean diversity per site) within the dredged area. There were significant increases (P0.01) in species richness (from 31.2 to 67.9 mean number of species per site) and total abundance (from 177.7 to 752 mean number of individuals per site) in adjacent benthic areas. The distribution and the predicted deposition rates of the sediment plume correlated precisely with the area of enhancement (P<0.05). The potential causal relationship between deposition and faunal enhancement is discussed. We suggest that the enhanced effect is probably a response of the benthic biota to an increase in available resources.     

Experimental evidence for the effects of the thalassinidean sandprawn <Emphasis Type="Italic">Callianassa kraussi</Emphasis> on macrobenthic communities

Bioturbation by thalassinidean sandprawns is known to structure soft-bottom communities, and field observations have suggested that the sandprawn Callianassa kraussi is a significant force influencing macrofaunal communities. To investigate causal relationships, a field experiment was undertaken in Durban Bay, South Africa, in which experimental cages were used to exclude or include C. kraussi and the abundance of macrofauna in these treatments documented. Cage effects were assessed by comparing macrofauna in inclusion cages with that of unmanipulated areas containing high densities of C. kraussi equivalent to those in inclusion cages. Measurements were made in 3 months, in March, June and September 2005. Total abundance and species richness of macrofauna were significantly greater in exclusion cages than in inclusion treatments during all sampling seasons, while diversity differed between these treatments in June and September only. Ordinations indicated that macrofaunal assemblages in exclusion cages differed statistically from inclusion and control treatments in all three sampling seasons. In general, the surface-grazing gastropod Nassarius kraussianus and suspension and deposit-feeding species such as the polychaetes Prionospio sexoculata and Desdemona ornata, cumaceans, and the bivalves Dosinia hepatica and Eumarcia paupercula were significantly more abundant in prawn-exclusion plots, implying that they are negatively affected by bioturbation by C. kraussi, whereas burrowing infauna were not affected.     

Indirect effects of African megaherbivore conservation on bat diversity in the world's oldest desert

In extreme environments, temperature and precipitation are often the main forces responsible for structuring ecological communities and species distributions. The role of biotic interactions is typically thought to be minimal. By clustering around rare and isolated features, like surface water, however, effects of herbivory by desert-dwelling wildlife can be amplified. Understanding how species interact in these environments is critical to safeguarding vulnerable or data-deficient species. We examined whether African elephants (Loxodonta africana), black rhinoceros (Diceros bicornis), and southern giraffe (Giraffa giraffa) modulate insectivorous bat communities around permanent waterholes in the Namib Desert. We estimated megaherbivore use of sites based on dung transects, summarized vegetation productivity from satellite measurements of the normalized difference vegetation index, and surveyed local bat communities acoustically. We used structural equation models to identify relationships among megaherbivores and bat species richness and dry- (November 2016–January 2017) and wet- (February–May 2017) season bat activity. Site-level megaherbivore use in the dry season was positively associated with bat activity—particularly that of open-air foragers—and species richness through indirect pathways. When resources were more abundant (wet season), however, these relationships were weakened. Our results indicate that biotic interactions contribute to species distributions in desert areas and suggest the conservation of megaherbivores in this ecosystem may indirectly benefit insectivorous bat abundance and diversity. Given that how misunderstood and understudied most bats are relative to other mammals, such findings suggest that managers pursue short-term solutions (e.g., community game guard programs, water-point protection near human settlements, and ecotourism) to indirectly promote bat conservation and that research includes megaherbivores’ effects on biodiversity at other trophic levels.     

Meiofauna on the seagrass Thalassia testudinum: population characteristics of harpacticoid copepods and associations with algal epiphytes

The composition and abundance of bladedwelling meiofauna was determined over a 15 mo period (1983–1984) from a Thalassia testudinum Banks ex König meadow near Egmont Key, Florida, USA. Harpacticoid copepods, copepod nauplii, and nematodes were the most abundant meiofaunal taxa on T. testudinum blades. Temporal patterns in species composition and population life-history stages were determined for harpacticoid copepods, the numerically predominant taxon. Sixteen species or species complexes of harpacticoid copepods were identified. Harpacticus sp., the most abundant harpacticoid, comprised 47.8% of the total copepods collected, and was present throughout the study. Copepodites dominated the population structures of the blade-dwelling harpacticoid species on most collection dates. Ovigerous females and/or copepodites were always present, indicating continuous reproductive activity. Results suggest that epiphytic algae influence meiofaunal abundance on seagrass blades, as densities of most meiofaunal taxa at Egmont Key were positively associated with percent cover of epiphytic algae throughout the study. The majority of significant correlations between meiofaunal density and cover of epiphytic algae involved filamentous algae, although encrusting algae dominated the epiphytic community. It appears that resources provided by epiphytic algae to seagrass meiofauna (additional food, habitat, and/or shelter from predation) may be associated with algal morphology.     

Microbial reaction rates and bacterial communities in sediment surrounding burrows of two nereidid polychaetes (Nereis diversicolor and N. virens)

The effects of infaunal mode of life on sediment properties, microbial reaction rates, as well as abundance and composition of bacterial communities were studied in sediment surrounding burrows (mucus lining, oxidised wall, ambient anoxic and surface sediment) of two closely related, but behaviourally different, nereidid polychaete worms: the facultative suspension-feeder Nereis (Hediste) diversicolor and the obligate deposit-feeder Nereis (Neanthes) virens. Burrow sediment of the two species was collected from two adjacent (50 m distance) shallow sandy locations (Kertinge Nor, Denmark). The burrow lining and wall of both polychaete species were enriched in organic matter originating from mucous secretions by the inhabitants and phytoplankton trapped through irrigation. This was more evident for N. diversicolor that shows a significantly higher irrigation rate than N. virens. Both the organic matter mineralisation rates (based on anaerobic incubations) and bacterial abundance were higher along the burrow linings and walls. However, accumulation of porewater TCO₂ and dissolved organic carbon in sediments adjacent to burrows increased most rapidly in the presence of N. diversicolor, suggesting higher heterotrophic activity associated with this species. Surprisingly, bacterial abundance was lower around burrows of N. diversicolor than those from N. virens indicating that burrow environments from the first species harbour a more active bacterial community. Molecular fingerprints of the 16S rRNA gene from bacterial communities showed that the composition of the burrow linings and walls resembled the ambient anoxic sediment rather than the oxic sediment surface. On the other hand, the bacterial fingerprints of the sediment surrounding the burrows of the two polychaete species were markedly different suggesting either a site-specific difference in sediment parameters or a significant species-specific impact of the burrow inhabitants.     

Macroinfaunal structure and effects of thermal discharges in a mesohaline habitat of Chesapeake Bay,near a Nuclear Power Plant

The soft-bottom macroinfauna of the Chesapeake Bay near the Calvert Cliffs Nuclear Power Plant, Maryland, USA, was studied quarterly in 1977. A total of 42,900 organisms distributed among 55 taxa was taken in 180 Smith-McIntyre grabs. Two communities and an ecotone between these two communities were identified in association with three sediment types: sand, sand-clay, and clay. Reproductive activities of 8 numerically dominant species are described. The macroinfauna at Calvert Cliffs was largely seasonal; species richness and organism abundances were lowest in late summer. The polychaetes Scolecolepides viridis and Heteromastus filiformis and the bivalves Macoma balthica and Mya arenaria were dominant in March-June. In September-December, the polychaetes Neanthes succinea, Paraprionospio pinnata, and Glycinde solitaria and the bivalve Gemma gemma became dominant. There were clear indications of differences associated with sediment types in total number of species, total number of individuals, and abundances of the dominant species. The shallower and intermediate habitats had higher sand-clay ratios, lower organic carbon contents, and larger numbers of organisms than the deeper clay habitat. Within each depth, no apparent detrimental effects caused by the thermal discharges on total number of species, total number of individuals, abundances of the dominant species, species diversity or evenness were found. Increased abundance was observed at the discharge stations for a few species, especially for Mya arenaria and N. succinea.     

Consequences of Buffelgrass Pasture Development for Primary Productivity,Perennial Plant Richness,and Vegetation Structure in the Drylands of Sonora,Mexico

Abstract: In large parts of northern Mexico native plant communities are being converted to non‐native buffelgrass (Pennisetum ciliare) pastures, and this conversion could fundamentally alter primary productivity and species richness. In Sonora, Mexico land conversion is occurring at a regional scale along a rainfall‐driven gradient of primary productivity, across which native plant communities transition from desert scrub to thorn scrub. We used a paired sampling design to compare a satellite‐derived index of primary productivity, richness of perennial plant species, and canopy‐height profiles of native plant communities with buffelgrass pastures. We sampled species richness across a gradient of primary productivity in desert scrub and thorn scrub vegetation to examine the influence of site productivity on the outcomes of land conversion. We also examined the influence of pasture age on species richness of perennial plants. Index values of primary productivity were lower in buffelgrass pastures than in native vegetation, which suggests a reduction in primary productivity. Land conversion reduced species richness by approximately 50% at local and regional scales, reduced tree and shrub cover by 78%, and reduced canopy height. Land conversion disproportionately reduced shrub species richness, which reflects the common practice among Sonoran ranchers of conserving certain tree and cactus species. Site productivity did not affect the outcomes of land conversion. The age of a buffelgrass pasture was unrelated to species richness within the pasture, which suggests that passive recovery of species richness to preconversion levels is unlikely. Our findings demonstrate that land conversion can result in large losses of plant species richness at local and regional scales and in substantial changes to primary productivity and vegetation structure, which casts doubt on the feasibility of restoring native plant communities without active intervention on the part of land managers.     

Hotspots of Epiphytic Lichen Diversity in Two Young Managed Forests

Understanding within-stand variation in diversity of epiphytes will provide an improved basis for producing timber while conserving biological diversity. Two 80-ha, 50–year–old managed stands of conifers were surveyed to locate 0.4 ha putative "diversity" plots, the areas appearing most diverse in lichen epiphytes. These plots were generally located in areas made heterogeneous by canopy gaps, wolf trees (trees with large-diameter lower branches), and old-growth remnant trees. "Matrix" plots, in contrast, were chosen at random from the remaining, more homogenous forest. Diversity plots hosted from 25% to 40% more epiphytic lichen species than matrix plots in both stands. The strongest within-stand gradients in species composition were correlated with percentage of plot occupied by gaps and wolf trees. Percentage of the plot in gaps was correlated with species richness (r = 0.79). In the more structurally diverse stand, diversity and abundance of nitrogen-fixing "cyanolichens" were correlated with percentage of the plot occupied by gaps (0.5 < r < 0.9), and alectorioid lichens were correlated with percentage of the plot occupied by old-growth remnant trees (0.5 < r < 0.6). In the stand with more homogenous structure, percentage of the plot under gaps was correlated with regionally common species that were otherwise absent or sparse in the matrix. Protecting gaps, hardwoods, wolf trees, and old-growth remnant trees during thinning or other partial cutting is likely to promote the majority of epiphytic macrolichens in young conifer forests. Because these features are easily recognized on aerial photos and on the ground by land managers, it is practical to manage for forest structures that would promote lichen diversity.