Microcystin-LR biodegradation by Sphingopyxis sp. USTB-05

A promising bacterial strain for biodegrading microcystin-LR (MC-LR) as the sole carbon and nitrogen source was successfully isolated from Lake Dianchi, China. The strain was identified as Sphingopyxis sp. USTB-05, which was the first isolated MCs-biodegrading Sphingopyxis sp. in China. The average biodegradation rate of MC-LR by Sphingopyxis sp. USTB-05 was 28.8 mg??L^?1 per day, which was apparently higher than those of other bacteria reported so far. The optimal temperature and pH for both strain USTB-05 growth and MC-LR biodegradation were 30??C and 7.0, respectively. The release of MC-LR from the cyanobacterial cells collected from Lake Guishui and the biodegradation of MC-LR by both strain and cell-free extract (CE) were investigated. The results indicated that MC-LR with the initial concentration of 4.0 mg??L^?1 in water was biodegraded by Sphingopyxis sp. USTB-05 within 4 d, while MC-LR with the initial concentration of 28.8 mg??L^?1 could be completely removed in 3 h by CE of Sphingopyxis sp. USTB-05 containing 350 mg??L^?1 protein. During enzymatic biodegradation of MC-LR, two intermediate metabolites and a dead-end product were observed on an HPLC chromatogram. Moreover, the similar scanning profiles of MC-LR and its metabolic products indicate that the Adda side-chain of MC-LR was kept intact in all products.     

Isolation and characterisation of a carbofuran degrading Burkholderia sp. PCL3 from carbofuran-phytoremediated rhizosphere soil

A bacterial strain capable of degrading carbofuran as the sole carbon source was isolated from carbofuran-phytoremediated rhizosphere soil of rice. A 16S rRNA study identified the strain as Burkholderia sp. (isolate PCL3). Free cells of isolate PCL3 possessed inhibitory-type degradation kinetics with a q _max of 0.087 day^?1 and S _m of 248.76 mg·L^?1. Immobilised PCL3 on corncob and sugarcane bagasse possessed Monod-type degradation kinetics with a q _max of 0.124 and 0.098 day^?1, respectively. The optimal pH and temperature with the highest degradation rate coefficient of carbofuran were pH 7.5 and 35 °C, respectively.     

Biodegradation kinetics of cymoxanil in aquatic system

A potential method to detoxify pesticides in aquatic system is using bioremediation. In this study, four microorganisms (Pseudomonas sp (EB11), Streptomyces sp. (EB12), Aspergillus niger (EB13) and Trichoderma viride (EB14) were isolated from cucumber leaves previously treated with cymoxanil using enrichment technique. These strains were evaluated for their potential to detoxify cymoxanil in aquatic system at the concentration level of 5×10^?4M. The effect of pH and temperature on the growth ability of the tested strains was also investigated by measuring the intracellular protein and mycelia dry weight for bacterial and fungal strains, respectively. Moreover, the remaining toxicity of cymoxanil after 28 days of incubation with tested strains was evaluated to confirm the complete removal of any toxic materials (cymoxanil and its metabolites). The results showed that the optimum pH for the growth of cymoxanil degrading strains (bacteria and fungi) was 7. A temperature of 30°C appears to be the optimum for the growth of either fungal or bacterial strains. Pseudomonas sp. (EB11) was the most effective strain in cymoxanil degradation followed Streptomyces sp (EB12), Trichoderma viride (EB14) and Aspergillus niger (EB13), with half-lives of 4.33, 9.5, 17.3 and 24.7 days, respectively. The degradation of cymoxanil by bacterial strains was much faster than fungal one. There is no remaining toxicity of cymoxanil detected in aqueous media previously treated with Pseudomonas sp. (EB11) for 28 days. The results suggest that bioremediation by Pseudomonas sp. (EB11) are promising for the detoxification of cymoxanil in aqueous media.     

Selection of poly(R)-3-hydroxybutyric acid utilising bacteria by enrichment,optimisation and compatibility testing for consortia development

Bacterial strains with poly-3-hydroxybutyrate (PHB) degradation potential were isolated from waste yard soil samples of selected industrial sites in Uttarakhand, India, and two microbial consortia were developed, i.e. Consortium I comprises Pseudomonas sp. strain Rb10, Pseudomonas sp. strain Rb11 and Bacillus sp. strain Rb18, and Consortium II is composed of Lysinibacillus sp. strain Rb1, Pseudomonas sp. strain Rb13 and Pseudomonas sp. strain Rb19. The current study involved enrichment selection via liquid and semi-solid media, followed by isolation and screening of bacterial strains using PHB pellets and films. Furthermore, the identification and characterisation was done by triphasic approach. The utilisation of PHB by the characterised strains was confirmed by Fourier transform infrared spectroscopy and scanning electron microscopy. Moreover, the minimum inhibitory concentration of solubilised PHB was found to be 2.5?mg/mL, which was detected through ‘clear zone assay’. Further, the selection and biocompatibility testing of potential isolates were performed for the formation of bacterial consortia. Thus, the present work would provide direct and standardised protocol for screening and selection of potential microbiomes for biodegradation of polymers by overcoming the negative effect of organic solvents. Moreover, indigenously developed consortia would be evaluated for their in situ biodegradation potential against various bioplastic films.     

Dibenzofuran: Bakterielle Mineralisierung

The degradation of uniformly¹⁴C-labelled dibenzofuran (DBF) by the strainPseudomonas sp HH 69 and a consortium consisting of the DBF-degrading Pseudomonas strain NRM and an accompanying Nocardia-like strain NRH, was monitored in liquid-batch cultures and in different soil samples. Experiments involving the strain and a consortium in aereated liquid cultures (batch process) showed that DBF was utilized as a source of energy and carbon. Thereby, more than 65% of DBF is rapidly converted to CO₂, about 20% to biomass and only about 10% to slow-degrading intermediate metabolites, respectively. The same microorganisms also exhibited comparable degrees of degradation efficiency in various types of soils contaminated with DBF. For instance, DBF, uniformly distributed in sterile soil samples, in concentrations between 0.2 to 200 ppm, was converted to CO₂, within 10 days, to the extent of about 75% by the strainPseudomonas sp. HH 69.     

Effects of salinity on soil bacterial and archaeal community in estuarine wetlands and its implications for carbon sequestration: verification in the Yellow River Delta

Soils from two typical tidal salt marshes with varied salinity in the Yellow River Delta wetland were analysed to determine possible effects of salinity on soil carbon sequestration through changes in soil microbiology. The mean soil respiration (SR) of the salt water–fresh water mixing zone (MZ) was 2.89 times higher than that of the coastal zone (CZ) (4.73 and 1.63?μmol?m^?2?s^?1, respectively, p?Pseudomonas sp. and Limnobacter sp. that might have led to its higher dehydrogenase activity and respiratory rates. Additionally, the CZ possessed more Halobacteria and Thaumarchaeota with the ability to fix CO₂ than the MZ. Significantly lower soil salinity in MZ (4.25?g?kg^?1) was suitable for β-Proteobacteria, but detrimental for Halobacteria compared with CZ (7.09?g?kg^?1, p?相似文献   

Bacterial degradation of monocrotophos and phyto- and cyto-toxicological evaluation of metabolites

The bacterium Serratia marsescens strain JAS16 was isolated from agricultural soil which had prior exposure to monocrotophos for three years. The strain JAS16 tolerated up to 1200 mg L^–1 monocrotophos and degraded the insecticide (1000 mg L^–1) at a degradation rate constant of 136 d^?1 (DT₅₀ = 3.7 d). In soil, the degradation rate constant was 105 d^?1 (DT₅₀ = 4.8 d). A schematic pathway is being proposed from the degraded products derived from gas chromatography--mass spectrometry (GC-MS). The phytotoxicity of degradation products to Vigna radiata, Vigna unguiculata, and Macrotyloma uniflorum and the genotoxicity to Allium cepa roots were found to be low. A cost-effective powder-based formulation was achieved with the isolate. The isolate remained viable during the storage and also multiplied with a higher colony forming units (CFU) load g^–1 for over a period of seven weeks of storage.     

Isolation and characterization of an Arthrobacter sp. strain HB-5 that transforms atrazine

A bacterial strain (HB-5) capable of utilizing atrazine as sole carbon and nitrogen source for growth was isolated from an industrial wastewater sample by enrichment culture. The isolate was identified as Arthrobacter sp. according to its phenotypic features, physiologic and biochemical characteristics, and phylogenetic analysis. The strain exhibited faster atrazine degradation rates in atrazine-containing mineral media than the well-characterized atrazine-degrading bacteria Pseudomonas sp. ADP. The broad optimum pH and temperature ranges observed for strain HB-5 indicate that it has potential for remediation of atrazine-contaminated sites. Strain HB-5 first metabolizes atrazine to yield hydroxyatrazine. Then, the bacterium metabolizes hydroxyatrazine to cyanuric acid, but could not mineralize atrazine.     

Degradation characteristics and metabolic pathway of 4-nitrophenol by a halotolerant bacterium Arthrobacter sp. CN2

Arthrobacter sp. strain CN2, capable of degrading 4-nitrophenol, was isolated from activated sludge. Degradation of 4-nitrophenol was optimized at pH 7.7, 30?°C, and 0.53% of glucose. Salt tolerance of 4-nitrophenol degradation was as high as 6% (w/v). Several biodegradation intermediates were identified and quantified by high-performance liquid chromatography and mass spectrometry. 4-Nitrocatechol is involved in the degradation of 4-nitrophenol by CN2. Scale-up of 4-nitrophenol degradation was conducted in a bioreactor with different salinity. When the salinity was below 7%, the degradation rate of 4-nitrophenol was above 90% (100 mg L^?1, 3 L).     

As(V)-reduction to As(III) by arsenic-resistant Bacillus spp. bacterial strains isolated from low-contaminated sediments of the Oliveri-Tindari Lagoon,Italy

Five arsenic-resistant bacterial strains designated MT1, MT2, MT3, V1 and V2 were isolated from sediments of the Oliveri-Tindari Lagoon (Italy), which comprises six small lakes whose sediments contain low arsenic concentrations. Phylogenetic analysis of the 16S rRNA gene sequences assigned them to the genus Bacillus. Bacillus sp. strain MT3 showed higher tolerance to As(III) and As(V), as indicated by minimum inhibitory concentrations of 14 and 135 mmol^?1, respectively. Bacillus sp. strain V1 showed growth inhibition at 14 mmol^?1 in the presence of As(III) and at 68 mmol^?1 in the presence of As(V), whereas the arsenic resistance of Bacillus sp. strain MT1 was 10 and 27 mmol^?1 for As(III) and As(V), respectively. The strains Bacillus spp. MT2 and V2 showed low levels of As(III) and As(V) resistance, as it was unable to grow at concentrations>7 and 14 mmol^?1, respectively. The isolated arsenic-resistant Bacillus spp. strains were able to reduce As(V) to As(III), especially Bacillus spp. strain MT3. This study suggests that the isolated bacterial strains play a role in the arsenic biogeochemical cycle of arsenic-poor sediments in the Oliveri-Tindari Lagoon.     

Biodegradation of N,N-bis(carboxymethyl)-L-glutamate and its utilization as sole source of carbon,nitrogen, and energy by a Rhizobium radiobacter strain in seawater

Biodegradation of N,N-bis(carboxymethyl)-L-glutamate and its utilization by micro-organisms in marine environments were studied in Organization of Economic Development and Cooperation (OECD) screening tests and with pure bacterial cultures. Biodegradation in excess of 60% was achieved in closed bottle tests in less than 60 days, suggesting complete degradation. The bacterial strain isolated from marine sandy sediment and utilizing N,N-bis(carboxymethyl)-L-glutamate as sole source of carbon, nitrogen, and energy was identified as Rhizobium radiobacter. The strain was capable to mineralize N,N-bis(carboxymethyl)-L-glutamate in seawater and in synthetic media containing 0–60 g L^?1 sea salts. Growth and adaptation studies indicated that N-carboxymethyl-L-glutamate and L-glutamate are main metabolites.     

Biodegradation of phenylurea herbicide diuron by microorganisms from long-term-treated sugarcane-cultivated soils in Kenya

The phenylurea herbicide diuron [N-(3,4-dichlorophenyl)-N,N-dimethylurea] is widely used alone or in a broad range of herbicide formulations. Its degradation in sugarcane-cultivated soils which have been impacted by the herbicide through repeated applications was studied. Liquid culture experiments with diuron as the only carbon source led to the isolation of different bacterial strains capable of degrading diuron. The bacterial species belonging to the genera Bacillus, Vagococcus, and Burkholderia, identified through biochemical and molecular characterization, degraded diuron to different extents. The isolated Bacillus cereus, Vagococcus fluvialis, Burkholderia ambifaria, and Bacillus spp1 degraded diuron by 21%, 25%, 22%, and 19% of the initially applied concentration of 40?mg?L^?1, respectively, after 35 days of incubation in liquid culture media. Small amounts of 3,4-dichloroaniline and the de-methylated metabolite N-(3,4-dichlorophenyl)-N-methylurea were detected in liquid culture media. The combination of V. fluvialis and B. ambifaria showed an enhanced degradation of up to 30% of the initially applied concentration of 40?mg?L^?1. Degradation by pure isolates was low (18–25%) compared to the capacities of diuron degradation shown by the bacterial communities (58–74%). This study showed the presence of diuron degraders in sugarcane-cultivated soils impacted by diuron due to repeated applications.     

Arsenic detoxification potential of <Emphasis Type="Italic">aox</Emphasis> genes in arsenite-oxidizing bacteria isolated from natural and constructed wetlands in the Republic of Korea

Arsenic is subject to microbial interactions, which support a wide range of biogeochemical transformations of elements in natural environments such as wetlands. The arsenic detoxification potential of the bacterial strains was investigated with the arsenite oxidation gene, aox genotype, which were isolated from the natural and constructed wetlands. The isolates were able to grow in the presence of 10 mM of sodium arsenite (As(III) as NaAsO₂) and 1 mM of d+glucose. Phylogenetic analysis based on 16S rRNA gene sequencing indicated that these isolated strains resembled members of the genus that have arsenic-resistant systems (Acinetobacter sp., Aeromonas sp., Agrobacterium sp., Comamonas sp., Enterobacter sp., Pantoea sp., and Pseudomonas sp.) with sequence similarities of 81–98%. One bacterial isolate identified as Pseudomonas stutzeri strain GIST-BDan2 (EF429003) showed the activity of arsenite oxidation and existence of aoxB and aoxR gene, which could play an important role in arsenite oxidation to arsenate. This reaction may be considered as arsenic detoxification process. The results of a batch test showed that P. stutzeri GIST-BDan2 (EF429003) completely oxidized in 1 mM of As(III) to As(V) within 25–30 h. In this study, microbial activity was evaluated to provide a better understanding of arsenic biogeochemical cycle in both natural and constructed wetlands, where ecological niches for microorganisms could be different, with a specific focus on arsenic oxidation/reduction and detoxification.     

Degradation of benzyldimethyl hexadecylammonium chloride by Bacillus niabensis and Thalassospira sp. isolated from marine sediments

Following enrichment in its presence, two strains of bacteria, isolated from marine sediments, were shown to degrade the quaternary ammonium surfactant benzyldimethyl hexadecylammonium chloride (BDHAC) in a minimal salts medium. The bacteria identified by 16S ribosomal deoxyribonucleic acid sequencing were shown to belong to several genera and determined to be Bacillus niabensis and Thalassospira sp. Initial investigations demonstrated that the bacteria were capable of degrading BDHAC when it was present at concentrations in the range 2–4 mg mL^?1. In media containing BDHAC, up to 90% was degraded within 7 days, but limited growth of the strain was observed at 2 and 4 mg mL^?1 BDHAC. Preliminary analysis of samples after degradation experiment by electrospray ionization mass spectrometry/mass spectrometry produced a peak with a parent–daughter ion transition of 136 → 91, corresponding to N,N-dimethylbenzylamine. The presence of this potential metabolite suggests the cleavage of the C-alkyl-N bond as a step in BDHAC catabolism.     

Glycolate metabolism by Pseudomonas sp., strain S227, isolated from a coastal marine sediment

Glycolate excreted by phytoplankton is a potentially important nutrient for bacteria in coastal and estuarine environments. The metabolism of glycolate by Pseudomonas sp., strain S227, originally isolated from the New York Bight Apex, has been studied. The specific growth rate for this strain on glycolate is 0.156 doublings h^-1. The apparent V_max and K_m for glycolate uptake are 83.6 nmol min^-1 mg cell protein^-1 and 7.4x10^-8 M, respectively. The preferential respiration of the carboxyl carbon (C-1) and the incroporation of the hydroxymethyl carbon (C-2) suggest that the glycerate pathway is used for growth on glycolate. Alternatively, another pathway can be utilized which results in the complete catabolism of glycolate. Glycolate and lactate metabolism are also closely linked either by a common metabolic pathway or a common transport system other than the monocarboxylate transport system. The magnesium ion concentration is also important in glycolate metabolism. The characteristics of glycolate metabolism observed in Pseudomonas sp., strain S227, are advantageous in coastal and estuarine environments where glycolate production is intermittent, and the concentrations are low.     

Selective pseudosolubilization capability of Pseudomonas sp. DG17 on n-alkanes and uptake mechanisms analysis

Pseudosolubilized ability of Pseudomonas sp. DG17 on n-alkanes, role of biosurfactants in n-octadecane uptake and trans-membrane transport mechanism of n-octadecane were studied by analyzing amount of pseudosolubilized oil components in water phase, and the fraction of radiolabeled ¹⁴C n-octadecane in the broth and cell pellet. GC-MS results showed that pseudosolubilized oil components were mainly C₁₂ to C₂₈ of n-alkanes. In n-octadecane broth, pseudosolubilized n-octadecane could be accumulated as long as pseudosolubilized rate was faster than mineralization rate of substrate, and the maximum concentration of pseudosolubilized n-octadecane achieved to 45.37 mg·L^?1. All of these results showed that Pseudomonas sp. DG17 mainly utilized alkanes by directly contacting with pseudosolubilized small oil droplets in the water phase. Analysis of ¹⁴C amount in cell pellet revealed that an energy-dependent system mainly controlled the trans-membrane transport of n-octadecane.     

Carbon dioxide fixation by Chlorella sp. USTB-01 with a fermentor-helical combined photobioreactor

A promising microalgal strain isolated from fresh water, which can grow both autotrophically on inorganic carbon under lighting and heterotrophically on organic carbon without lighting, was identified as Chlorella sp. USTB-01 with the phylogenetic analysis based on 18S ribosomal ribonucleic acid (rRNA) gene sequences. In the heterotrophic batch culture, more than 20.0 g·L^?1 of cell dry weight concentration (DWC) of Chlorella sp. USTB-01 was obtained at day 5, and which was used directly to seed the autotrophic culture. A novel fermentor-helical combined photobioreactor was established and used to cultivate Chlorella sp. USTB-01 for the fixation of carbon dioxide (CO₂). It showed that the autotrophic growth of Chlorella sp. USTB-01 in the combined photobioreactor was more effective than that in the fermentor alone and the maximum DWC of 2.5 g·L^?1 was obtained at day 6. The highest CO₂ fixation of 95% appeared on day 1 in the exponential growth phases of Chlorella sp. USTB-01 and 49.8% protein was found in the harvested microalgal cells.     

Microbial decolourisation of pulp and paper mill effluent in presence of nitrogen and phosphorus by activated sludge process

The effect of pH, nutrient and aeration was studied on the removal of colour and reduction of BOD, COD and heavy metals with addition of readily available source of nitrogen and phosphorus in concentration of 1.0 g/L. Recalcitrant compound was effectively degraded by active microbial consortia. The isolated bacteria were identified as Pseudomonas putida (S1), Citrobacter sp. (S4) and Enterobacter sp. (S5). These organisms not only decolourised effluent upto 97% but reduced BOD, COD, phenolics and sulfide upto 96.63, 96.80, 96.92 and 96.67% respectively within 24 hrs of aeration and the heavy metals were removed upto 82-99.80%. The TSS and TDS were sharply reduced due to degradation. The absorption maxima was also decreased to 90%. However, in control without the microbial consortium no noticeable change was produced.     

Evidence for n-alkane consumption and oxidation by filamentous cyanobacteria from oil-contaminated coasts of the Arabian Gulf

Microcoleus chthonoplastes and Phormidium corium were isolated from microbial mats covering all sediments along the Arabian Gulf coasts. These isolates could consume and oxidise n-alkanes. The establishment of axenic cultures faced the problem that with progressive axenity the cyanobacterial growth seemed to cease. The associated organotrophic bacteria, Rhodococcus rhodochrous, Arthrobacter nicotianae, Pseudomonas sp. and Bacillus sp., could utilize n-alkanes. The total number of these organotrophs was about 2×10⁶ cells g⁻¹ fresh culture, and R. rhodochrous was the most dominant. In order to test the potential of cyanobacteria for n-alkane consumption, experiments were constructed to rule out the role of the associated organotrophic bacteria. Aliquots, 0.5 g fresh cyanobacterial samples, each containing about 1×10⁶ organotrophic bacterial cells (≡0.001 mg fresh bacteria) were incubated in inorganic medium aliquots supplied with an n-alkane. The same was repeated using 1.0×10⁶ cells each of the four organotrophic bacteria instead of the cyanobacterial samples. The nonaxenic cyanobacterial samples consumed up to 60% of the available alkane, whereas no detectable consumption was measured in any of the pure organotrophic bacterial cultures. For all organotrophic bacteria, the numbers had to be increased ten-thousand times in order that detectable alkane consumption might become measurable. The fatty acids resulting from the n-alkane oxidation were found incorporated in cell lipid classes characteristic of cyanobacteria, namely in galactolipids and sulfolipids. These results may imply that the two test cyanobacteria contribute directly to n- alkane uptake and oxidation. Received: 6 May 1997 / Accepted: 2 October 1997     

Seasonal differences in treatment efficiency of a set of stabilization ponds in a semi-arid region

This article aims to determine the significant differences of the seasonal changes of pH, chemical oxygen demand (COD), biological oxygen demand (BOD), and total suspended solids (TSS) parameters in a wastewater stabilization pond. The variation of these parameters followed the seasonal pattern of temperature. The mean seasonal pH of the influent wastewater ranged between 7.8 (in spring) and 7.9 (in summer), while in the final effluents it was between 7.9 (in winter) and 8.3 (in summer). The mean seasonal COD of the influent wastewater ranged between 650?mg?L^?1 in spring and 600?mg?L^?1 in autumn, whereas in the effluents it was between 150?mg?L^?1 in autumn and 270?mg?L^?1 in spring. The mean seasonal BOD₅ of the influent wastewater ranged between 360?mg?L^?1 in autumn and 390?mg?L^?1 in winter, whereas in the effluents it was between 66?mg?L^?1 in summer and 130?mg?L^?1 in winter. The results showed that the percent removals of COD, BOD₅ and TSS from final effluents were maximum in summer for COD and BOD₅ (76%), summer (83%) and for TSS in winter (78%), respectively. Data analysis showed that there were significant differences between parameters of pH, COD, BOD₅ and TSS at four different seasons (p?相似文献