高氯酸盐降解菌的分离鉴定及特性研究

研究降解高氯酸盐环境污染物微生物的形态特征、分子系统特征、生长特性和降解活性。利用PCA选择性培养基富集分离高氯酸根降解菌,观察其形态,进行生理生化测定,用分子克隆技术获得菌株的16SrDNA基因并测序,并对菌株的16S rDNA基因序列进行比对和系统发育分析,并用培养技术和离子色谱法检测菌株对底物的利用和降解情况。从镇江江滨和镇江新区污水处理厂的活性污泥中分别分离到一株能降解高氯酸根的菌株JD14和JD125。此菌株在24～30℃条件下较快地降解底物高氯酸盐,其中在24℃下,15d内可以将初始质量浓度为1600mg·kg-1的高氯酸根降解（86±6.5）%。对两菌株的16S rDNA基因进行了克隆和测序,并进行系统发育分析,结果表明菌株JD14和Dechloromonas sp.SIUL相似度高达100%,JD125和Dechlorospirillum相似度达97%,最后鉴定JD14和JD125属于高氯酸盐降解菌。此前国内并无降解高氯酸根微生物的报道,对今后在环境污染防治中开发利用此类细菌具有指导意义。     

含油废水中一株高效油脂降解菌的筛选和鉴定

从中国海洋大学餐厅下水道废水中分离、筛选获得9株具有油脂降解能力的菌株。菌株ss-11油脂降解能力最强,在初始筛选条件下其降解率达47.29%。对ss-11的降解条件进行初步研究,结果表明,在初始豆油量为1.0mL·L-1,初始pH为7.5,摇床转速为140r·min-1,37℃下培养72h,该菌的油脂降解率达87.55%。通过菌落形态、生理生化特征、16SrDNA序列系统发育分析,将其鉴定为产酸克雷伯氏菌（Klebsiell aoxytoca）。     

1株贫营养好氧反硝化菌的分离鉴定及其脱氮特性

从水库底泥样品中,以硝酸盐为唯一氮源进行驯化、分离筛选出1株能在贫营养及好氧条件下进行高效反硝化的菌株PY8,经过电镜形态学观察、生理生化和16S rDNA序列分析,并基于16SrDNA序列结果,构建了该菌株的系统发育树,最终确定菌株PY8为根瘤菌Rhizobiumsp.。考察了初始pH值、温度、C/N、初始硝酸钠质量浓度、投菌量对菌株PY8硝酸盐还原活性的影响,以及该菌株的异养硝化性能。结果表明,在pH6.0～10.0,温度25～30℃,C/N1.0～9.0,初始硝酸钠质量浓度0.01～0.50g·L-1,投菌量1%～15%时,菌株PY8培养72h后的硝氮去除率可达到95%以上。另外,该菌株具有同时硝化-反硝化作用,在培养过程中氨氮去除率可达到58%左右。实验结果表明,菌株PY8在微污染水体生物脱氮领域中具有很大的应用潜力。     

Isolation and characterisation of cadmium-resistant bacteria from an industrially polluted coastal ecosystem on the southeast coast of India

A total of 35 bacterial strains were isolated from the industrially polluted Cuddalore coast, on the southeast coast of India. Of these, 17 strains were cadmium resistant and the remainder were sensitive. Six strains (C-1, C-8, C-10, C-12, C-14 and N-1) were selected based on high levels of cadmium tolerance (>150 mg L^?1) and were termed highly cadmium-resistant bacteria (HCRB). These HCRB were identified on the basis of morphological, biochemical and partial sequencing of their 16S rRNA genes. The antibiotic-susceptibility patterns and minimum inhibitory concentrations (MIC) of different metals (Cu²⁺, Pb²⁺ and Zn²⁺) against each HCRB were determined. Among the isolates, C-14 showed high degrees of metal and antibiotic resistance compared with other HCRB. Growth rates of HCRB at two different Cd²⁺ concentrations (50 and 100 mg L^?1) and under different metal conditions (Cd²⁺, Cu²⁺ and Pb²⁺) were also investigated. HCRB growth rates were lower in the metal-treated condition than in the untreated condition. Isolates C-14 and N-1 removed>80% of Cd²⁺ from cadmium-treated broth. However, isolate C-14 removed 92.3% of Cd²⁺ compared with 86.5% for isolate N-1. Bacteria showing residual growth rates under metal stress conditions might be useful in metal removal applications under growing conditions.     

废水反硝化生物反应器中喹啉降解细菌的分离与特性

杂环化合物喹啉是焦化等工业废水中的一种难降解化合物.有关喹啉微生物降解的研究还很有限,分离筛选多样的喹啉降解细菌,对认识喹啉的降解机制和强化废水中喹啉的降解具有重要意义.本研究通过富集和多种分离条件的培养,从焦化废水活性污泥及唪啉驯化的生物膜样品中分离获得56株与喹啉降解相关的菌株,以16S rDNA双酶切方法进行ARDRA分型,将这些菌株分为12个OTU.选取部分代表菌株进行16S rDNA测序分析,表明分离所获得的菌株主要是Ochrobactrum、Bacillus、Pseudomonas和Rhodococcus属的微生物.通过对部分菌株测定其喹啉降解能力.发现大部分菌株都能以喹啉为唯一碳源进行生长并高效降解喹啉,极少数菌株不能单独降解喹啉.降解喹啉的Ochrobactrum属菌株还未见报道.     

甲胺磷农药降解菌HS-A32的分离鉴定及降解特性

从长期受有机磷农药污染的土壤中分离到一株降解菌HS-A32,能以甲胺磷作为唯一的碳源和氮源生长.HS-A32菌降解甲胺磷的最适温度为30℃,最适pH值为7.0,甲胺磷的最适降解浓度为1 000 mg/L,降解率达82%.聚酰胺薄层色谱(TLC)可检测到降解产物中有NH4 生成.HS-A32菌能以多种碳、氮源生长,外加可利用的碳源和氮源能促进甲胺磷的降解.通过16S rDNA扩增、测序,运用BLAST检索分析,构建系统进化树.结合生理生化鉴定,初步确定HS-A32为不动杆菌属(Acinetobacter).HS-A32菌还能降解甲基对硫磷等多种有机磷农药.图6表1参14     

油田土壤中脱除有机硫菌株的分离与鉴定

从中原油田采集的土壤样品中分离得到有脱除有机硫(二苯并噻吩)能力的菌株ZYX。该菌株为革兰氏染色阳性,无运动性,专性需氧,固体培养基上菌落为浅黄色、圆形、湿润、有光泽、边缘整齐,培养2d后平均直径为1.5mm,在液体培养基中有明显的杆-球状生长周期。对该菌株的16SrDNA的全序列测序,并进行DNA同源性分析,发现它与与Arthrobactersp.P2的同源性为99.53%,其主要形态及生理生化特征也与Arthrobacter属相符。实验表明,最佳生长所需的DBT浓度是0.01g·L-1,最适pH值为7.0,最佳碳源和氮源分别为甘油和谷氨酰氨。     

孔雀石绿降解菌M3的分离鉴定及降解特性研究

从鱼塘底泥中筛选分离出1株能高效降解低含量孔雀石绿(MG)的细菌M3.经16S rDNA同源性序列分析,鉴定为泛菌属(Pantoea sp.).30 ℃静止培养条件下,该菌株对0.5、1.0、2.0和5.0 mg·L-1孔雀石绿5 d的降解率分别为97.54%、97.1%、100%和77.8%.菌株M3不能以MG为唯一碳源进行生长和代谢.葡萄糖、NH4NO3、KH2PO4/K2HPO4均能影响菌株M3对MG的降解.20～30 ℃温度范围内菌株M3对MG有明显降解效果,且降解速率随温度上升而提高.     

耐热石油烃降解混合菌的筛选及其群落结构分析

对克拉玛依采集的部分石油污染土壤进行了筛选,得到了5组石油烃高效降解混合菌,其中混合菌KL9-1在45℃的条件下,通过7 d的降解,稀油的降解率达到43.27%,稠油的降解率达到20.09%。混合菌KL9-1经过多次分离纯化后,获得3株具有石油烃降解能力的优势单菌,3株单菌对稀油的降解率都在30%以上。结合分离单菌株的形态、生理生化特征和16S rDNA基因序列的分析结果,初步鉴定KL9-1-1为Pseudomonas putida,KL9-1-2和KL9-1-3为Pseudomonas sp.。     

一株大熊猫肠道厌氧纤维素菌的分离鉴定、系统发育分析及生物学特性的研究

从成都动物园健康大熊猫的肠道采集样品,富集分离获得一株典型的厌氧纤维素分解菌PD.分离菌是杆状,革兰氏阳性(G ),菌体大小为0.5μm×(3～5)μm,严格厌氧;生长温度为25～40℃,最适生长温度为38℃;pH范围5.0～9.0,最适pH7.2;在纤维素粉作碳源的琼脂培养基上菌落直径为1～3mm,白色透明斑;分离菌株不仅能利用纤维二糖、葡萄糖、蔗糖、淀粉、松三糖、覃糖等多种可溶性碳源,而且可以利用纤维素粉等不溶性碳源.同时,对菌株PD进行了16SrDNA的PCR扩增,并对扩增产物测序.对16SrDNA部分序列进行了分析,并构建了系统发育树,表明菌株PD属于梭菌属,与Clostridiumlentocellum(T)的16SrDNA序列具有92.2%相似性.图5表1参18     

Biodegradation of anthracene and phenanthrene by bacteria isolated from oil-contaminated soil of Bangladesh

Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous environmental pollutants entering into the environment through natural and anthropogenic activities. Owing to their toxicity to various life forms including humans, detoxification of PAHs is crucial to reduce their effects on cells. In this study, we have isolated two bacteria capable of degrading two common PAHs, anthracene and phenanthrene, from contaminated soil samples by using selective enrichment culture supplemented with test PAHs as the sole source of carbon and energy. The isolated bacteria were identified and affiliated as Pseudomonas aeruginosa strain KD and Stenotrophomonas maltophilia strain RC based on their 16s rRNA gene sequences. The degradation of anthracene and phenanthrene was estimated indirectly by measuring the decolourisation extent of a redox indicator, 2, 6-dichlorophenolindophenol, incorporated into PAH-supplemented mineral salt media. In the case of anthracene, ≥90% decolourisation was recorded at 20 and 48 days for P. aeruginosa and S. Maltophilia, respectively. On the other hand, ≥94% decolourisation was recorded at 56 and 52 days for P. aeruginosa and S. maltophilia, respectively during the utilisation of phenanthrene.     

4株多环芳烃降解菌的分离及鉴定

以多环芳烃(PAHs)为筛选培养基,从石油污染土壤和石油废水中筛选到4株能够降解PAHs的高效微生物菌株,分别定名为3-28、NF、EW和EY;并对其进行了形态学观察、生理生化指标测定及分子生物学鉴定.16S rDNA序列分析显示,这4株细菌分别有581、582、1209和1230个碱基,与Microbacterium、Cellulosimicrobium、Chelatococcus和Sphingopyxis等4个属有较高的序列同源性,分别为100%、97.8%、98.2%和99.0%.结合表型特征和16S rDNA序列分析,用DNAMAN构建系统发育树,并用Bootstraping法对其评价,初步将3-28、NF、EW和EY这4株PAHs降解菌分别归属于Microbacterium sp.、Cellulosimicrobium sp.、Chelatococcus sp.和Sphingopyxis sp..图3表1参22     

铅锌污染耕地中重金属耐受细菌调查

对铅锌矿冶炼厂周围耕地中的细菌总数和抗性细菌群体数进行了调查。结果表明 ,随着污染的加重 ,土壤中可培养的细菌数量急剧减少 ,抗性细菌的比例增加。但是 ,细菌对Pb、Zn胁迫的适应进化反应不一样。经过长期的选择作用后 ,多数细菌群体能够耐受低浓度的Pb污染 (<2mmol·L-1) ,部分群体对低浓度Pb(0 .5mmol·L-1)有依赖性 ,但没有观察到能够耐受Pb浓度大于 4mmol·L-1的群体 ;0 .5mmol·L-1的Zn对细菌有抑制作用 ,但在所调查的样品中都存在能够耐受 4～ 6mmol·L-1Zn污染的群体 ,有的群体甚至能耐受 8mmol·L-1的Zn污染。能同时耐受Pb、Zn 2种重金属污染的群体数量较少 ,且耐受水平也较低 ,仅达到 2mmol·L-1。     

九株染料脱色菌的脱色特性及其质粒与基因分析

对9株染料脱色菌的脱色特性及其质粒的携带情况进行初步的研究，测定和比较了这9株细菌的16SrDNA序列，并对其进行分子鉴定和分类，经检测的9株细菌均属于肠杆菌科，其中脱色能力较广谱的5株细菌均未检测到质粒的存在，它们在系统分类地位上基本上聚为一类，与埃希氏菌属的大肠埃希氏菌具有较高的同源性。而另外4株脱色能力单一、仅对三苯基甲烷类染料有较强脱色能力的菌株除一株以外，其它3株均携带有大分子量的质粒，在系统分类地位上也基本聚为另一类。     

菲降解菌的筛选鉴定及其降解酶基因的研究

经过富集从活性污泥中筛选出两株菲降解菌WSCII和WSCIII,经16SrDNA鉴定,它们分别属于鞘氨醇单胞菌属(Sphingomonassp. )和假单胞菌属(Pseudomonassp. ),在28℃下4d内对菲( 0. 6g/L)的降解率分别达到了70. 9%和78. 1%;在LB、萘和菲为碳源的培养条件下,测得菌体的双加氧酶比活力不同.在菲的诱导下,两株菌的双加氧酶比活力最高,而以LB和萘为碳源时酶的比活力较低,其中WSCII在萘中不能生长;这表明该酶在两菌中皆为底物诱导表达.以其它菌的萘双加氧酶基因大亚基片段做模板制备异源探针,与两菌总DNA进行斑点杂交;结果表明,这两株菌可能含有不同的菲双加氧酶基因.利用简并引物进行PCR扩增菲双加氧酶,结果仅能从WSCIII的总DNA中扩增得到目的片段,序列分析证明,该基因与已报道的(P. putidaNCIB9816 -4, AF491307 )双加氧酶同源性最高为98%. 图5参10     

Sol-gel immobilisation of methyl parathion degrading bacteria isolated from agricultural areas of Pakistan

The following areas are discussed in this paper: immobilisation of bacterial consortium in sol-gel; methyl parathion degradation and bioremediation applications; evaluation of indigenous bacterial isolates of contaminated soils. Bacterial strains were isolated from agricultural areas of Pakistan which were contaminated with methyl parathion. A bacterial consortium of seven (out of 64) Enterobacteriaceae isolates including Citrobacter, Enterobacter and Proteus vulgaris capable of degrading methyl parathion (enzyme activity ranging 410–675 mU mL^?1 for individual isolates and 982 mU/mL for consortium) was selected and subsequently immobilised in tetraethyl orthosilicate (TEOS) and sodium-silicate-based sol-gel matrices. Cell viability of suspended and immobilised bacterial consortium was monitored using a minimal salt medium supplemented with methyl parathion. The results indicate that sol-gel immobilisation can be helpful to increase the shelf life of methyl parathion degrading bacterial strains along with preservation of biological activity for bioremediation applications in field.     

一株菲降解菌的分离鉴定及其降解条件研究

以菲为研究对象,从克拉玛依稠油污染土壤中筛选到1株对菲具有较好降解效果的菌株JZ3-21。通过形态观察、生理生化指标及16S rDNA序列分析对该菌株进行了鉴定。该株菌的16S rDNA序列与Pseudomonas属的相似性达99%,结合分离菌株的形态、生理生化特征和16S rDNA基因序列的分析结果,初步鉴定该菌株为恶臭假单胞菌（Pseudomonas putida.）。对其降解条件进行了研究,结果表明：在40℃,pH 8.0,接种量为1.5%的条件下,菌株对初始质量浓度为100 mg.L-1的菲在64 h内的降解率高达94.2%。该菌对高质量浓度菲有较好的耐受性,其最高耐受质量浓度可达2 000 mg.L-1。     

Isolation and characterisation of a carbofuran degrading Burkholderia sp. PCL3 from carbofuran-phytoremediated rhizosphere soil

A bacterial strain capable of degrading carbofuran as the sole carbon source was isolated from carbofuran-phytoremediated rhizosphere soil of rice. A 16S rRNA study identified the strain as Burkholderia sp. (isolate PCL3). Free cells of isolate PCL3 possessed inhibitory-type degradation kinetics with a q _max of 0.087 day^?1 and S _m of 248.76 mg·L^?1. Immobilised PCL3 on corncob and sugarcane bagasse possessed Monod-type degradation kinetics with a q _max of 0.124 and 0.098 day^?1, respectively. The optimal pH and temperature with the highest degradation rate coefficient of carbofuran were pH 7.5 and 35 °C, respectively.     

Biodegradation of Hexachlorocyclohexane by two species of Bacillus isolated from contaminated soil

Biodegradation of α, β, γ and δ hexachlorocyclohexane (HCH) isomers was studied in broth medium and soil microcosm by Bacillus circulans and Bacillus brevis isolated from contaminated soil. Degradation of α and γ isomers by both the bacterial isolates was higher than thermodynamically stable β and δ isomers. However, B. circulans was found more effective than B. brevis for β and δ isomers. Maximum rate of degradation was recorded at 150 mg/L followed by 100 and 50 mg/L. Soil microcosm study revealed maximum degradation of HCH isomers in the treatment containing natural soil, pesticide and bacterial inocula than the treatment having sterilised soil, pesticide and bacterial isolates. Chloride release was positively co-related with HCH degradation in broth medium as well as in soil microcosm, suggesting that B. circulans and B. brevis hold promising potential by having efficient enzyme(s) required for dechlorination of HCH from contaminated sites.     

北运河水体浮游细菌群落的空间分布特征及其与水质的关系

污染源汇入和闸坝拦截等因素能够影响城市河流水生生态环境质量,主要表现在群落结构和功能的改变。分别于春季、夏季和冬季3个季节对北运河干流的10个点进行水样采集,通过16S rDNA末端限制性片段长度多态性(T-RFLP)分析手段研究了北运河河道水体浮游细菌的群落结构,以揭示流域微生物多样性以及浮游细菌群落与水质因子的响应关系。共得到47种不同的片段,其中218bp片段是优势菌。T-RFs片段计算微生物多样性指数和均匀度指数结果表明,目前北运河水体生态结构已经较为脆弱。冬季与其他季节的群落组成有明显差别,夏季细菌丰度高于冬季。通过CANOCO软件分析浮游细菌群落结构与水质指标的空间特点,发现水体流动性降低、支流汇入和污染源的汇入都会引起微生物群落结构在空间上的改变;环境因子与微生物群落组成的相关性研究表明,总磷、溶解性有机碳(DOC)和温度对北运河微生物群落结构影响较大。