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The influence of multiple anchored fish aggregating devices (FADs) on the spatial behavior of yellowfin (Thunnus albacares) and bigeye tuna (T. obesus) was investigated by equipping all thirteen FADs surrounding the island of Oahu (HI, USA) with automated sonic receivers
(“listening stations”) and intra-peritoneally implanting individually coded acoustic transmitters in 45 yellowfin and 12 bigeye
tuna. Thus, the FAD network became a multi-element passive observatory of the residence and movement characteristics of tuna
within the array. Yellowfin tuna were detected within the FAD array for up to 150 days, while bigeye tuna were only observed
up to a maximum of 10 days after tagging. Only eight yellowfin tuna (out of 45) and one bigeye tuna (out of 12) visited FADs
other than their FAD of release. Those nine fish tended to visit nearest neighboring FADs and, in general, spent more time
at their FAD of release than at the others. Fish visiting the same FAD several times or visiting other FADs tended to stay
longer in the FAD network. A majority of tagged fish exhibited some synchronicity when departing the FADs but not all tagged
fish departed a FAD at the same time: small groups of tagged fish left together while others remained. We hypothesize that
tuna (at an individual or collective level) consider local conditions around any given FAD to be representative of the environment
on a larger scale (e.g., the entire island) and when those conditions become unfavorable the tuna move to a completely different
area. Thus, while the anchored FADs surrounding the island of Oahu might concentrate fish and make them more vulnerable to
fishing, at a meso-scale they might not entrain fish longer than if there were no (or very few) FADs in the area. At the existing
FAD density, the ‘island effect’ is more likely to be responsible for the general presence of fish around the island than
the FADs. We recommend further investigation of this hypothesis.
相似文献
Laurent Dagorn (Corresponding author)Email: |
Kim N. HollandEmail: |
David G. ItanoEmail: |
3.
Vertical movement and habitat of opah (Lampris guttatus) in the central North Pacific recorded with pop-up archival tags 总被引:1,自引:0,他引:1
Data from 11 pop-up archival transmitting tags attached to opah (Lampris guttatus, F. Lampridae) in the central North Pacific between November 2003 and March 2005 were used to describe their vertical movement
and habitat. In the subtropical gyre northwest of the Hawaiian Islands, opah generally inhabited a 50–400 m depth range and
8–22°C temperatures. They were frequently found in depths of 50–150 m at night and in greater depths (100–400 m) during the
day, but were constantly moving vertically within this broad range. At night, excursions below 200 m were not uncommon and
during the day they were very likely to spend some time at depths <175 m. Their vertical speeds were generally <25 cm s−1 but on one occasion an opah descended at a burst speed of 4 m s−1. Vertical habitat use by individual opah apparently varied with local oceanographic conditions, but over a 24-h period the
average temperature experienced was always in the narrow range of 14.7 to 16.5°C.
相似文献
Jeffrey J. PolovinaEmail: |
4.
The tiger shark (Galeocerdo cuvier Peron and Lesueur 1822) is a widely distributed predator with a broad diet and the potential to affect marine community structure, yet information on local patterns of abundance for this species is lacking. Tiger shark catch data were gathered over 7 years of tag and release research fishing (1991–2000, 2002–2004) in Shark Bay, Western Australia (25°45′S, 113°44′E). Sharks were caught using drumlines deployed in six permanent zones (~3 km2 in area). Fishing effort was standardized across days and months, and catch rates on hooks were expressed as the number of sharks caught h−1. A total of 449 individual tiger sharks was captured; 29 were recaptured. Tiger shark catch rate showed seasonal periodicity, being higher during the warm season (Sep–May) than during the cold season (Jun–Aug), and was marked by inter-annual variability. The most striking feature of the catch data was a consistent pattern of slow, continuous variation within each year from a peak during the height of the warm season (February) to a trough in the cold season (July). Annual growth rates of recaptured individuals were generally consistent with estimates from other regions, but exceeded those for populations elsewhere for sharks >275 cm fork length (FL), perhaps because mature sharks in the study area rely heavily on large prey. The data suggest that (1) the threat of predation faced by animals consumed by tiger sharks fluctuates dramatically within and between years, and (2) efforts to monitor large shark abundance should be extensive enough to detect inter-annual variation and sufficiently intensive to account for intra-annual trends. 相似文献
5.
A benthological survey in the Benguela upwelling area off northern Namibia (located at 17.3°S and water depth ranging between
26 and 117 m) showed the concentration of dissolved oxygen and the accumulation of organic-rich sediments to control macrozoobenthic
community patterns. In contrast to highly biodiverse nearshore areas with well-structured shell deposits of the brachiopod
Discinisca tenuis (Sowerby 1847), the benthic community in the oxygen minimum zone (OMZ) decreased strongly in species numbers. Nevertheless,
a well-established community ranging from 13 to 31 species persisted. Species densities (300–3,350 ind m−2) and biomass (4–109 g afdw/m2) were surprisingly high for areas with near bottom oxygen concentrations from 0.06 to 0.88 ml l−1. In contrast to OMZ’s of other upwelling areas, where the benthic macrofauna is generally dominated by small-bodied polychaetes,
off Namibia larger key organisms like the bivalve Nuculana bicuspidata (Gould 1845) and the snail Nassarius vinctus (Marrett 1877) accounted for a large proportion of the macrozoobenthos >1 mm. This is supposed to have a distinct effect
on the functional properties of the sediments.
相似文献
Michael Lothar ZettlerEmail: |
6.
In this paper we examine the use of data augmentation techniques for simplifying iterative simulation in the context of both
Bayesian and classical statistical inference for survival rate estimation. We examine two distinct model families common in
population ecology to illustrate our ideas, ring-recovery models and capture–recapture models, and we present the computational
advantage of this approach. We discuss also the fact that problems associated with identifiability in the classical framework
can be overcome using data augmentation, but highlight the dangers in doing so under both inferential paradigms.
相似文献
I. C. OlsenEmail: |
7.
Matthew R. Schofield Richard J. Barker Darryl I. MacKenzie 《Environmental and Ecological Statistics》2009,16(3):369-387
Hierarchical mark-recapture models offer three advantages over classical mark-recapture models: (i) they allow expression
of complicated models in terms of simple components; (ii) they provide a convenient way of modeling missing data and latent
variables in a way that allows expression of relationships involving latent variables in the model; (iii) they provide a convenient
way of introducing parsimony into models involving many nuisance parameters. Expressing models using the complete data likelihood
we show how many of the standard mark-recapture models for open populations can be readily fitted using the software WinBUGS.
We include examples that illustrate fitting the Cormack–Jolly–Seber model, multi-state and multi-event models, models including
auxiliary data, and models including density dependence.
相似文献
Darryl I. MacKenzieEmail: |
8.
F. Badalamenti C. J. Sweeting N. V. C. Polunin J. Pinnegar G. D’Anna C. Pipitone 《Marine Biology》2008,154(5):765-773
Trawling has a significant effect on the structure of marine communities, yet the ubiquity of trawling impacts makes testing
such effects difficult. This study examines trawling impacts on trophodynamics of three fishes among the Gulfs of Castellammare
and Termini Imerese (northern Sicily), the first of which has been subject to a trawling ban since 1990 that initially resulted
in an eightfold increase in total fish biomass. The Gulf of Termini Imerese remains heavily fished and was treated as a control
site. Nitrogen and carbon stable isotope data were used to assess fishing induced changes in trophic levels or source of production
supporting three demersal fish species; Mullus barbatus,
Merluccius merluccius and Lophius budegassa following a control-impact approach. The exclusion of trawling resulted in only small alteration of δ15N in two of the three-three species. There were no systematic changes in the δ13C of any species sampled. Thus, a large influence of trawling on the trophodynamics of the studied species at sampled size
was discounted. Although stable isotopes do not have spatial or temporal resolution to identify detailed shifts in diet composition,
their integrative nature highlights that the trophic role these species play is robust to fishing impacts at scales over which
the fishery operates. This is despite a significant increase in the abundance of these species and of total fish biomass within
the protected area.
相似文献
C. J. SweetingEmail: |
9.
Stefan Krause Lutz Mattner Richard James Tristan Guttridge Mark J. Corcoran Samuel H. Gruber Jens Krause 《Behavioral ecology and sociobiology》2009,63(7):1089-1096
Analyses of animal social networks derived from group-based associations often rely on randomisation methods developed in
ecology (Manly, Ecology 76:1109–1115, 1995) and made available to the animal behaviour community through implementation of a pair-wise swapping algorithm by Bejder
et al. (Anim Behav 56:719–725, 1998). We report a correctable flaw in this method and point the reader to a wider literature on the subject of null models in
the ecology literature. We illustrate the importance of correcting the method using a toy network and use it to make a preliminary
analysis of a network of associations among eagle rays.
相似文献
Stefan KrauseEmail: |
10.
Ralph L. Kodell 《Environmental and Ecological Statistics》2009,16(1):3-12
Although benchmark-dose methodology has existed for more than 20 years, benchmark doses (BMDs) still have not fully supplanted
the no-observed-adverse-effect level (NOAEL) and lowest-observed-adverse-effect level (LOAEL) as points of departure from
the experimental dose–response range for setting acceptable exposure levels of toxic substances. Among the issues involved
in replacing the NOAEL (LOAEL) with a BMD are (1) which added risk level(s) above background risk should be targeted as benchmark
responses (BMRs), (2) whether to apply the BMD methodology to both carcinogenic and noncarcinogenic toxic effects, and (3)
how to model continuous health effects that aren’t observed in a natural risk-based context like dichotomous health effects.
This paper addresses these issues and recommends specific BMDs to replace the NOAEL and LOAEL.
相似文献
Ralph L. KodellEmail: |
11.
Chang Xuan Mao 《Environmental and Ecological Statistics》2007,14(4):473-481
Consider the removal experiment used to estimate population sizes. Statistical methods towards testing the homogeneity of
capture probabilities of animals, including a graphical diagnostic and a formal test, are presented and illustrated by real
biological examples. Simulation is used to assess the test and compare it with the χ2 test.
相似文献
Chang Xuan MaoEmail: |
12.
Griffith DA 《Environmental geochemistry and health》2008,30(6):495-509
Properly sampling soils and mapping soil contamination in urban environments requires that impacts of spatial autocorrelation
be taken into account. As spatial autocorrelation increases in an urban landscape, the amount of duplicate information contained
in georeferenced data also increases, whether an entire population or some type of random sample drawn from that population
is being analyzed, resulting in conventional power and sample size calculation formulae yielding incorrect sample size numbers
vis-à-vis model-based inference. Griffith (in Annals, Association of American Geographers, 95, 740–760, 2005) exploits spatial statistical model specifications to formulate equations for estimating the necessary sample
size needed to obtain some predetermined level of precision for an analysis of georeferenced data when implementing a tessellation
stratified random sampling design, labeling this approach model-informed, since a model of latent spatial autocorrelation
is required. This paper addresses issues of efficiency associated with these model-based results. It summarizes findings from
a data collection exercise (soil samples collected from across Syracuse, NY), as well as from a set of resampling and from
a set of simulation experiments following experimental design principles spelled out by Overton and Stehman (in Communications in Statistics: Theory and Methods, 22, 2641–2660). Guidelines are suggested concerning appropriate sample size (i.e., how many) and sampling network (i.e., where).
相似文献
Daniel A. GriffithEmail: |
13.
Glen D. Johnson 《Environmental and Ecological Statistics》2008,15(3):293-311
Infectious disease surveillance has become an international top priority due to the perceived risk of bioterrorism. This is
driving the improvement of real-time geo-spatial surveillance systems for monitoring disease indicators, which is expected
to have many benefits beyond detecting a bioterror event. West Nile Virus surveillance in New York State (USA) is highlighted
as a working system that uses dead American Crows (Corvus brachyrhynchos) to prospectively indicate viral activity prior to human onset. A cross-disciplinary review is then presented to argue that
this system, and infectious disease surveillance in general, can be improved by complementing spatial cluster detection of
an outcome variable with predictive “risk mapping” that incorporates spatiotemporal data on the environment, climate and human
population through the flexible class of generalized linear mixed models.
相似文献
Glen D. JohnsonEmail: |
14.
When animals die in traps in a mark-recapture study, straightforward likelihood inferences are possible in a class of models.
The class includes M0, Mt, and Mb as reported by White et al. (Los Alamos National Laboratory, LA-8787-NERP, pp 235, 1982), those that do not involve heterogeneity.
We include three Markov chain “persistence” models and show that they provide good fits in a trapping study of deer mice in
the Cascade-Siskiyou National Monument of Southern Oregon where trapping mortality was high.
相似文献
Fred L. RamseyEmail: |
15.
Estimating abundance of killer whales in the nearshore waters of the Gulf of Alaska and Aleutian Islands using line-transect sampling 总被引:1,自引:0,他引:1
Alexandre N. Zerbini Janice M. Waite John W. Durban Rick LeDuc Marilyn E. Dahlheim Paul R. Wade 《Marine Biology》2007,150(5):1033-1045
Killer whale (Orcinus orca Linnaeus, 1758) abundance in the North Pacific is known only for a few populations for which extensive longitudinal data
are available, with little quantitative data from more remote regions. Line-transect ship surveys were conducted in July and
August of 2001–2003 in coastal waters of the western Gulf of Alaska and the Aleutian Islands. Conventional and Multiple Covariate
Distance Sampling methods were used to estimate the abundance of different killer whale ecotypes, which were distinguished
based upon morphological and genetic data. Abundance was calculated separately for two data sets that differed in the method
by which killer whale group size data were obtained. Initial group size (IGS) data corresponded to estimates of group size
at the time of first sighting, and post-encounter group size (PEGS) corresponded to estimates made after closely approaching
sighted groups. ‘Resident’-type (fish-eating) killer whales were more abundant than the ‘transient’-type (mammal-eating).
Abundance estimates of resident killer whales (991 [95% CI = 379–2,585] [IGS] and 1,587 [95% CI = 608–4,140] [PEGS]), were
at least four times greater than those of the transient killer whales (200 [95% CI = 81–488] [IGS] and 251 [95% CI = 97–644]
whales [PEGS]). The IGS estimate of abundance is preferred for resident killer whales because the estimate based on PEGS data
may show an upward bias. The PEGS estimate of abundance is likely more accurate for transients. Residents were most abundant
near Kodiak Island in the northern Gulf of Alaska, around Umnak and Unalaska Islands in the eastern Aleutians, and in Seguam
Pass in the central Aleutians. This ecotype was not observed between 156 and 164°W, south of the Alaska Peninsula. In contrast,
transient killer whale sightings were found at higher densities south of the Alaska Peninsula between the Shumagin Islands
and the eastern Aleutians. Only two sightings of ‘offshore’-type killer whales were recorded during the surveys, one northeast
of Unalaska Island and the other south of Kodiak Island. These are the first estimates of abundance of killer whale ecotypes
in the Aleutian Islands and Alaska Peninsula area and provide a baseline for quantifying the role of these top predators in
their ecosystem.
Electronic Supplementary Material Supplementary material is available in the online version of this article at and is accessible for authorized users.
相似文献
Alexandre N. ZerbiniEmail: |
16.
We propose a hierarchical modeling approach for explaining a collection of spatially referenced time series of extreme values.
We assume that the observations follow generalized extreme value (GEV) distributions whose locations and scales are jointly
spatially dependent where the dependence is captured using multivariate Markov random field models specified through coregionalization.
In addition, there is temporal dependence in the locations. There are various ways to provide appropriate specifications;
we consider four choices. The models can be fitted using a Markov Chain Monte Carlo (MCMC) algorithm to enable inference for
parameters and to provide spatio–temporal predictions. We fit the models to a set of gridded interpolated precipitation data
collected over a 50-year period for the Cape Floristic Region in South Africa, summarizing results for what appears to be
the best choice of model.
相似文献
Alan E. GelfandEmail: |
17.
Lucio Barabesi 《Environmental and Ecological Statistics》2007,14(4):483-494
Line-intersect sampling based on segmented transects is adopted in many forest inventories to quantify important ecological
indicators such as coarse woody debris attributes. By assuming a design-based approach, Affleck, Gregoire and Valentine (2005,
Environ Ecol Stat 12:139–154) have recently proposed a sampling protocol for this line-intersect setting and have suggested
an estimation method based on linear homogeneous estimators. However, their proposal does not encompass the estimation procedure
currently adopted in some national forest inventories. Hence, the present paper aims to introduce a unifying perspective for
both methods. Moreover, it is shown that the two procedures give rise to coincident estimators for almost all the usual field
applications. Finally, some strategies for efficient segmented-transect replications are considered.
相似文献
Lucio BarabesiEmail: |
18.
Hierarchical spatial point process analysis for a plant community with high biodiversity 总被引:1,自引:0,他引:1
Janine B. Illian Jesper Møller Rasmus P. Waagepetersen 《Environmental and Ecological Statistics》2009,16(3):389-405
A complex multivariate spatial point pattern of a plant community with high biodiversity is modelled using a hierarchical
multivariate point process model. In the model, interactions between plants with different post-fire regeneration strategies
are of key interest. We consider initially a maximum likelihood approach to inference where problems arise due to unknown
interaction radii for the plants. We next demonstrate that a Bayesian approach provides a flexible framework for incorporating
prior information concerning the interaction radii. From an ecological perspective, we are able both to confirm existing knowledge
on species’ interactions and to generate new biological questions and hypotheses on species’ interactions.
相似文献
Rasmus P. WaagepetersenEmail: |
19.
Surface “swarms” of the swimming crabs Charybdis smithii are still considered as an unusual phenomenon in the open Indian Ocean, although their dense pelagic aggregations were already
reported in waters off the Indian coast and in the northern Arabian Sea. Based on an extensive large-scale data series taken
over 45 years, we demonstrate that C. smithii is common in the pelagic provinces of the western Indian Ocean driven by the wind monsoon regime. Swimming crabs are dispersed
by the monsoon currents throughout the equatorial Indian Ocean. They aggregate at night in the upper 150-m layer, where their
estimated biomass derived from pelagic trawling data can exceed 130 kg km−2. Abundance of C. smithii can reach >15,000 ind. km−2 in July (i.e. the peak of the south-west monsoon), declines by 50-fold in March and is negligible in May. C. smithii is an important prey for more than 30 species of abundant epipelagic top predators. In turn, it feeds on mesopelagic species.
This swimming crab is a major species of the intermediate trophic levels and represents a crucial seasonal trophic link in
the open ocean ecosystem of the western Indian Ocean. Outbursts in pelagic waters of huge biomasses of ordinarily benthic
crustaceans (C. smithii and Natosquilla investigatoris) are a remarkable feature of the Indian Ocean, although similar, but smaller, events are reported in the Pacific and Atlantic
Oceans.
相似文献
Evgeny RomanovEmail: |
20.
M. M. Manzano-Sarabia E. A. Aragón-Noriega C. A. Salinas-Zavala D. B. Lluch-Cota 《Marine Biology》2007,152(5):1021-1029
Life histories of penaeid shrimp have been classified according to the preferred habitats of postlarval, juvenile, and adult
stages, ranging from exclusively estuarine to exclusively offshore waters. Brown shrimp Farfantepenaeus californiensis migrate to an offshore habitat at the juvenile stage or even a smaller body size. This paper presents results of monthly
samplings from 24 stations over 1 year in the Agiabampo Lagoon complex, a hypersaline lagoon in northwestern Mexico. Five
species of penaeid shrimp were identified, with brown shrimp the most abundant during the year of sampling. Results suggest
that residency of brown shrimp inside this lagoon is longer than reported in previous studies. An interaction between length
and environmental variables (near-surface temperature, salinity, and rainfall) appear to be cues concerning migration.
相似文献
C. A. Salinas-ZavalaEmail: |