Restoring native fish assemblages to a regulated California stream using the natural flow regime concept

We examined the response of fishes to establishment of a new flow regime in lower Putah Creek, a regulated stream in California, U.S.A. The new flow regime was designed to mimic the seasonal timing of natural increases and decreases in stream flow. We monitored fish assemblages annually at six sample sites distributed over approximately 30 km of stream for eight years before and nine years after the new flow regime was implemented. Our purpose was to determine whether more natural stream flow patterns would reestablish native fishes and reduce the abundances of alien (nonnative) fishes. At the onset of our study, native fishes were constrained to habitat immediately (<1 km) below the diversion dam, and alien species were numerically dominant at all downstream sample sites. Following implementation of the new flow regime, native fishes regained dominance across more than 20 km of lower Putah Creek. We propose that the expansion of native fishes was facilitated by creation of favorable spawning and rearing conditions (e.g., elevated springtime flows), cooler water temperatures, maintenance of lotic (flowing) conditions over the length of the creek, and displacement of alien species by naturally occurring high-discharge events. Importantly, restoration of native fishes was achieved by manipulating stream flows at biologically important times of the year and only required a small increase in the total volume of water delivered downstream (i.e., water that was not diverted for other uses) during most water years. Our results validate that natural flow regimes can be used to effectively manipulate and manage fish assemblages in regulated rivers.     

Flows, droughts, and aliens: factors affecting the fish assemblage in a Sierra Nevada, California, stream

The fishes of Martis Creek, in the Sierra Nevada of California (USA), were sampled at four sites annually over 30 years, 1979-2008. This long-term data set was used to examine (1) the persistence and stability of the Martis Creek fish assemblage in the face of environmental stochasticity; (2) whether native and alien fishes responded differently to a natural hydrologic regime (e.g., timing and magnitude of high and low flows); and (3) the importance of various hydrologic and physical habitat variables in explaining the abundances of native and alien fish species through time. Our results showed that fish assemblages were persistent at all sample sites, but individual species exhibited marked interannual variability in density, biomass, and relative abundance. The density and biomass of native fishes generally declined over the period of study, whereas most alien species showed no significant long-term trends. Only alien rainbow trout increased in both density and biomass at all sites over time. Redundancy analysis identified three hydrologic variables (annual 7-day minimum discharge, maximum winter discharge, and number of distinct winter floods) and two habitat variables (percentage of pool habitat and percentage of gravel substrate) that each explained a significant portion of the annual variation in fish assemblage structure. For alien taxa, their proportional contribution to the total fish assemblage was inversely related to mean annual streamflow, one-day maximum discharge in both winter and spring, and the frequency of springtime floods. Results of this study highlight the need for continuous annual monitoring of streams with highly variable flow regimes to evaluate shifts in fish community structure. Apparent successes or failures in stream management may appear differently depending on the time series of available data.     

A Regional Perspective on the Diversity and Conservation of Tropical Andean Fishes

Abstract: The tropical Andes harbor an extraordinarily varied concentration of species in a landscape under increasing pressure from human activities. Conservation of the region's native plants and animals has received considerable international attention, but the focus has been on terrestrial biota. The conservation of freshwater fauna, particularly the conservation of fishes, has not been emphasized. Tropical Andean fishes are among the most understudied vertebrates in the world. We estimate that between 400 and 600 fish species inhabit the diverse aquatic environments in the region. Nearly 40% of these species are endemic. Tropical Andean fishes are vulnerable to ongoing environmental changes related to deforestation, water withdrawals, water pollution, species introductions, and hydropower development. Additionally, their distributions and population dynamics may be affected by hydrologic alterations and warmer water temperatures associated with projected climate change. Presently, at least three species are considered extinct, some populations are endangered, and some species are likely to decline or disappear. The long‐term persistence of tropical Andean fishes will depend on greater consideration of freshwater systems in regional conservation initiatives.     

Using survival analysis to study translocation success in the Gila topminnow (Poeciliopsis occidentalis).

Translocation, the intentional release of captive-propagated and/or wild-caught animals into the wild in an attempt to establish, reestablish, or augment a population, is a commonly used approach to species conservation. Despite the frequent mention of translocation as an aid in threatened or endangered species recovery plans, translocations have resulted in the establishment of few sustainable populations. To improve the effectiveness of translocation efforts, it is essential to identify and adopt features that contribute to successful translocations. This study analyzed 148 translocations of the endangered Gila topminnow (Poeciliopsis occidentalis) to identify various factors that have significantly influenced translocation success. We quantified success as the "persistence time" of translocated populations and used survival analysis to interpret the role of several factors. The following factors affected persistence times of translocated populations: season in which the fish were translocated, habitat type of the translocation site, and genetic origin of the fish stocked. In general, factors associated with stocking, the population stocked, and the site of translocation can significantly affect the persistence of translocated populations and thus increase the probability of translocation success. For Gila topminnow, future translocations should be undertaken in late summer or fall (not early summer), should occur into ponds (not streams, wells, or tanks), and should generally utilize individuals from genetic lineages other than Monkey Spring. For other species, a key lesson emerging from this work is that life history attributes for each translocated species need to be considered carefully.     

Post-Perturbation Genetic Changes in Populations of Endangered Virgin River Chubs

A 34-kilometer reach of the Virgin River, Utah-Arizona-Nevada, was poisoned with rotenone in an attempt to eradicate non-native red shiners ( Cyprinella lutrensis ), a species implicated in the decline of native fish populations in the American West. An error in detoxification resulted in lethal concentrations of piscicide passing through an additional 50 kilometers of stream. We used allozyme electrophoresis to analyze genetic variation among pre- and post-poison samples of endangered Virgin River chubs ( Gila seminuda ). Pre-poison samples indicated a single panmictic population in the river. In contrast, fish subsequently produced through natural recruitment in poisoned reaches exhibited deviations from the original pattern of genetic variation. A genetic bottleneck caused by severe reduction in the number of spawning adults was indicated. The altered pattern persisted 2.5 years post-poisoning, indicating unexpectedly slow recolonization from the unpoisoned reach upstream. Genetic variation among hatchery-produced young was similarly unrepresentative of the original pattern because of the small number of brood fish used in propagation. Because of their small numbers and/or restricted distribution, endangered species are particularly vulnerable to natural or anthropogenic catastrophes. Assessment of the genetic impact of such events is essential but requires that baseline data are available.     

Trait synergisms and the rarity, extirpation, and extinction risk of desert fishes

Understanding the causes and consequences of species extinctions is a central goal in ecology. Faced with the difficult task of identifying those species with the greatest need for conservation, ecologists have turned to using predictive suites of ecological and life-history traits to provide reasonable estimates of species extinction risk. Previous studies have linked individual traits to extinction risk, yet the nonadditive contribution of multiple traits to the entire extinction process, from species rarity to local extirpation to global extinction, has not been examined. This study asks whether trait synergisms predispose native fishes of the Lower Colorado River Basin (USA) to risk of extinction through their effects on rarity and local extirpation and their vulnerability to different sources of threat. Fish species with "slow" life histories (e.g., large body size, long life, and delayed maturity), minimal parental care to offspring, and specialized feeding behaviors are associated with smaller geographic distribution, greater frequency of local extirpation, and higher perceived extinction risk than that expected by simple additive effects of traits in combination. This supports the notion that trait synergisms increase the susceptibility of native fishes to multiple stages of the extinction process, thus making them prone to the multiple jeopardies resulting from a combination of fewer individuals, narrow environmental tolerances, and long recovery times following environmental change. Given that particular traits, some acting in concert, may differentially predispose native fishes to rarity, extirpation, and extinction, we suggest that management efforts in the Lower Colorado River Basin should be congruent with the life-history requirements of multiple species over large spatial and temporal scales.     

Community ecology of invasions: direct and indirect effects of multiple invasive species on aquatic communities

With many ecosystems now supporting multiple nonnative species from different trophic levels, it can be challenging to disentangle the net effects of invaders within a community context. Here, we combined wetland surveys with a mesocosm experiment to examine the individual and combined effects of nonnative fish predators and nonnative bullfrogs on aquatic communities. Among 139 wetlands, nonnative fish (bass, sunfish, and mosquitofish) negatively influenced the probability of occupancy of Pacific treefrogs (Pseudacris regilla), but neither invader correlated strongly with occupancy by California newts (Taricha torosa), western toads (Anaxyrus boreas), or California red-legged frogs (Rana draytonii). In mesocosms, mosquitofish dramatically reduced the abundance of zooplankton and palatable amphibian larvae (P. regilla and T. torosa), leading to increases in nutrient concentrations and phytoplankton (through loss of zooplankton), and rapid growth of unpalatable toad larvae (through competitive release). Bullfrog larvae reduced the growth of native anurans but had no effect on survival. Despite strong effects on natives, invaders did not negatively influence one another, and their combined effects were additive. Our results highlight how the net effects of multiple nonnative species depend on the trophic level of each invader, the form and magnitude of invader interactions, and the traits of native community members.     

Environmental variables and fisheries diversity of the Naaf River Estuary,Bangladesh

The Naaf River estuary is one of the large estuaries in the Bangladesh coastal region not to have been affected by extensive human disturbance. This research provides information about the fisheries diversity status by Estuarine Set Bag Net (ESBN) sampling relation to physicochemical variables in both spatio-temporal scales. About 25 km of the lower estuary was divided into six zones for sample collection by considering the accessibility and availability of the ESBN operation, fish landing centers and location of the fishing villages. In total 48 samples have been analyzed which were taken throughout March to October 2006. To quantify the species diversity, all fisheries data were analyzed by using EstimateS and EcoSim software which accounts the different diversity indices viz., species richness, Shannon–Wiener diversity Index, Dominance and Evenness index. The research results demonstrate that the Naaf River estuary is a habitat of 161 (species richness, Sobs = 161, Choa 1 = 162 ± 2.34, ACE = 161.73) different species which belong to 98 fin fishes, 23 shrimps and prawns, 13 crabs, 11 molluscs, 3 echinoderms, 4 other crustaceans; while 9 remain unidentified. Results on the aquatic environment, mainly salinity and turbidity were found to have a major influence on their occurrence and distribution. All the findings indicated that the Naaf River estuary is a highly productive system and provides a favourable environment for large variety of estuarine species assemblages.     

Going with the flow: using species-discharge relationships to forecast losses in fish biodiversity

In response to the scarcity of tools to make quantitative forecasts of the loss of aquatic species from anthropogenic effects, we present a statistical model that relates fish species richness to river discharge. Fish richness increases logarithmically with discharge, an index of habitat space, similar to a species-area curve in terrestrial systems. We apply the species-discharge model as a forecasting tool to build scenarios of changes in riverine fish richness from climate change, water consumption, and other anthropogenic drivers that reduce river discharge. Using hypothetical reductions in discharges (of magnitudes that have been observed in other rivers), we predict that reductions of 20-90% in discharge would result in losses of 2-38% of the fish species in two biogeographical regions in the United States (Lower Ohio-Upper Mississippi and Southeastern). Additional data on the occurrence of specific species relative to specific discharge regimes suggests that fishes found exclusively in high discharge environments (e.g., Shovelnose sturgeon) would be most vulnerable to reductions in discharge. Lag times in species extinctions after discharge reduction provide a window of opportunity for conservation efforts. Applications of the species-discharge model can help prioritize such management efforts among species and rivers.     

Public perception of river fish biodiversity in four European countries

Public support for biodiversity conservation is shaped by people's values and their knowledge, beliefs, and attitudes toward the environment. We conducted the first multinational representative survey of the general public's perceptions of river fish biodiversity in France, Germany, Norway, and Sweden. For the online survey, 1000 respondents per country were randomly selected from large panels following country-specific quotas set on age, gender, and educational level. Questions covered people's level of knowledge, beliefs, values, and attitudes toward river fish, environmental threats, and conservation measures. We found that the public had limited knowledge of freshwater fishes. Two non-native species, rainbow trout (Oncorhynchus mykiss) and brook trout (Salvelinus fontinalis), were widely perceived as native, whereas native Atlantic salmon (Salmo salar) was mostly classified as native in Scandinavia and largely as non-native in central Europe. These results suggest an extinction of experience paralleling the extirpation or decline of salmon stocks in countries such as Germany and France. Respondents thought pollution was the dominant threat to riverine fish biodiversity. In reality, habitat loss, dams, and the spread of non-native fishes are equally important. Despite limited biological knowledge, respondents from all countries held an overwhelmingly proecological worldview, supported conservation stocking, and appreciated native fishes, although only a minority interacted with them directly. Differences among the 4 countries related to several conservation issues. For example, threats to biodiversity stemming from aquaculture were perceived as more prevalent in Norway compared with the other 3 countries. Promoting fish conservation based on charismatic species and use values of fishes may work well in countries with a strong economic and cultural link to the freshwater environment, such as Norway. In countries where people rather abstractly care for nature, focusing conservation messaging on broader ecosystem traits and non-use values of fishes is likely to win more support.     

Coral Reef Habitats as Surrogates of Species, Ecological Functions, and Ecosystem Services

Abstract: Habitat maps are often the core spatially consistent data set on which marine reserve networks are designed, but their efficacy as surrogates for species richness and applicability to other conservation measures is poorly understood. Combining an analysis of field survey data, literature review, and expert assessment by a multidisciplinary working group, we examined the degree to which Caribbean coastal habitats provide useful planning information on 4 conservation measures: species richness, the ecological functions of fish species, ecosystem processes, and ecosystem services. Approximately one‐quarter to one‐third of benthic invertebrate species and fish species (disaggregated by life phase; hereafter fish species) occurred in a single habitat, and Montastraea‐dominated forereefs consistently had the highest richness of all species, processes, and services. All 11 habitats were needed to represent all 277 fish species in the seascape, although reducing the conservation target to 95% of species approximately halved the number of habitats required to ensure representation. Species accumulation indices (SAIs) were used to compare the efficacy of surrogates and revealed that fish species were a more appropriate surrogate of benthic species (SAI = 71%) than benthic species were for fishes (SAI = 42%). Species of reef fishes were also distributed more widely across the seascape than invertebrates and therefore their use as a surrogate simultaneously included mangroves, sea grass, and coral reef habitats. Functional classes of fishes served as effective surrogates of fish and benthic species which, given their ease to survey, makes them a particularly useful measure for conservation planning. Ecosystem processes and services exhibited great redundancy among habitats and were ineffective as surrogates of species. Therefore, processes and services in this case were generally unsuitable for a complementarity‐based approach to reserve design. In contrast, the representation of species or functional classes ensured inclusion of all processes and services in the reserve network.     

Absence of Blood Parasites in Indigenous and Introduced Birds from the Cook Islands, South Pacific

Abstract: We found no protozoan parasites in 79 blood smears of birds from the Cook Islands, South Pacific. Our sample consisted of 55 smears from nine indigenous species of land and aquatic birds, and 24 smears from one introduced land bird The absence or scarcity of avian hematozoa in the Cook Islands is probably due to a very low prevalence of infection among introduced and naturally colonizing species of birds, rather than a scarcity of insect vectors. On one hand, the apparent absence or extreme scarcity of avian hematozoa, particularly the malaria-causing Plasmodium spp., is fortunate from a conservation standpoint, considering the devastating impact that Plasmodium from human-introduced mosquitoes and birds has had on the indigenous avifauna of Hawaii during the past century. On the other hand, our results suggest that the indigenous birds of the Cook Islands, much like those of Hawaii, would have little natural resistance to avian malaria should it be introduced. Thus precautions should be taken to prohibit the introduction of potentially infected nonnative birds or mosquitoes in the Cook Islands and elsewhere in Polynesia     

Ecosystem ecology meets adaptive management: food web response to a controlled flood on the Colorado River, Glen Canyon

Large dams have been constructed on rivers to meet human demands for water, electricity, navigation, and recreation. As a consequence, flow and temperature regimes have been altered, strongly affecting river food webs and ecosystem processes. Experimental high-flow dam releases, i.e., controlled floods, have been implemented on the Colorado River, U.S.A., in an effort to reestablish pulsed flood events, redistribute sediments, improve conditions for native fishes, and increase understanding of how dam operations affect physical and biological processes. We quantified secondary production and organic matter flows in the food web below Glen Canyon dam for two years prior and one year after an experimental controlled flood in March 2008. Invertebrate biomass and secondary production declined significantly following the flood (total biomass, 55% decline; total production, 56% decline), with most of the decline driven by reductions in two nonnative invertebrate taxa, Potamopyrgus antipodarum and Gammarus lacustris. Diatoms dominated the trophic basis of invertebrate production before and after the controlled flood, and the largest organic matter flows were from diatoms to the three most productive invertebrate taxa (P. antipodarum, G. lacustris, and Tubificida). In contrast to invertebrates, production of rainbow trout (Oncorhynchus mykiss) increased substantially (194%) following the flood, despite the large decline in total secondary production of the invertebrate assemblage. This counterintuitive result is reconciled by a post-flood increase in production and drift concentrations of select invertebrate prey (i.e., Chironomidae and Simuliidae) that supported a large proportion of trout production but had relatively low secondary production. In addition, interaction strengths, measured as species impact values, were strongest between rainbow trout and these two taxa before and after the flood, demonstrating that the dominant consumer-resource interactions were not necessarily congruent with the dominant organic matter flows. Our study illustrates the value of detailed food web analysis for elucidating pathways by which dam management may alter production and strengths of species interactions in river food webs. We suggest that controlled floods may increase production of nonnative rainbow trout, and this information can be used to help guide future dam management decisions.     

Anadromous Fish as Keystone Species in Vertebrate Communities

Many wildlife species feed on anadromous fishes of several life-history stages. There is evidence for some wildlife species that the availability of anadromous fish is critically important for survival or reproduction. In some regions anadromous fishes in fresh water appear to be keystone food resources for vertebrate prediators and scavengers, forging an ecologically significant link between aquatic and terrestrial ecosystems. The spatial distribution of anadromous fish in fresh water, including the occurrence of runs in very small streams, has important consequences for wildlife biology (social interactions, distribution, activity patterns, possibly survivorship) and conservation of biodiversity.     

Quantifying Rarity, Losses, and Risks for Native Fishes of the Lower Colorado River Basin: Implications for Conservation Listing

Abstract:  We examined spatial distributions of fishes native to the lower basin of the Colorado River (25 species) at three scales to determine percent decline from historical distributions based on a regional biodiversity database. We cumulated records from 1843 to 1980 to develop a "historical distribution" for each species and used those occurrences recorded from 1981 to 1998 as "modern" records. We then contrasted historical and modern distributions to (1) quantify losses in spatial distribution; (2) determine how strongly these losses and fragmentation patterns corresponded to the perceived risk of extinction of each species, as represented by its status under the IUCN Red List of Endangered Species; and (3) update extinction risk rankings for 15 fishes endemic to the lower Colorado Basin according to the IUCN criteria. Based on presence and absence data, fish fauna of the lower Colorado Basin have suffered massive distributional losses. On average, ranges of extant species have diminished more than 45% relative to their historical distribution, and 35% of species have lost 50% or more of their occurrences. We provide nine new IUCN rankings and six updates to reflect more accurately the heightened imperilment of these species. Based on our new rankings, 7 of the 15 lower Colorado Basin endemics are critically endangered, 1 is endangered, 2 are vulnerable, and 1 is already extinct. We categorize the remaining 2 endemics as lower risk. This work demonstrates the utility of matching quantitative spatial metrics such as the scale-area slope statistic to extinction risk criteria for species whose persistence is strongly influenced by spatial distribution.     

Molecular Evidence for a Unique Evolutionary Lineage of Endangered Sonoran Desert Fish (Genus Poeciliopsis)

Efforts to restore an endangered species in its former range should be based on a sound understanding of evolutionary relationships among remaining natural populations. In this study mitochondrial (mt) DNA diversity within and among Gila River drainage populations of the endangered Sonoran topminnow ( Poeciliopsis occidentalis ) in Arizona was compared to that from neighboring populations in Sonora, Mexico, where the species remains locally abundant. No mtDNA diversity was detected within or among samples from the Gila River basin in Arizona. But considerable variation was found within and among populations from several river systems in Sonora. Examination of mtDNA from a population that inhabits the upper reaches of the Río Yaqui in southeastern Arizona revealed substantial divergence between it and all other populations examined. We comment on the implications of this divergent population for topminnow management in Arizona and argue for more-detailed genetic and morphological studies to determine the distributional limits and specific status of this highly divergent form.     

Effects of flow regimes altered by dams on survival, population declines, and range-wide losses of California river-breeding frogs

Widespread alteration of natural hydrologic patterns by large dams combined with peak demands for power and water delivery during summer months have resulted in frequent aseasonal flow pulses in rivers of western North America. Native species in these ecosystems have evolved with predictable annual flood-drought cycles; thus, their likelihood of persistence may decrease in response to disruption of the seasonal synchrony between stable low-flow conditions and reproduction. We evaluated whether altered flow regimes affected 2 native frogs in California and Oregon (U.S.A.) at 4 spatial and temporal extents. We examined changes in species distribution over approximately 50 years, current population density in 11 regulated and 16 unregulated rivers, temporal trends in abundance among populations occupying rivers with different hydrologic histories, and within-year patterns of survival relative to seasonal hydrology. The foothill yellow-legged frog (Rana boylii), which breeds only in flowing water, is more likely to be absent downstream of large dams than in free-flowing rivers, and breeding populations are on average 5 times smaller in regulated rivers than in unregulated rivers. Time series data (range = 8 - 19 years) from 5 populations of yellow-legged frogs and 2 populations of California red-legged frogs (R. draytonii) across a gradient of natural to highly artificial timing and magnitude of flooding indicate that variability of flows in spring and summer is strongly correlated with high mortality of early life stages and subsequent decreases in densities of adult females. Flow management that better mimics natural flow timing is likely to promote persistence of these species and others with similar phenology.     

基于非本地物种毒性数据推导出的水质基准可为本地物种提供适当保护吗？

基于非本地物种的毒性数据推导出的水质基准一直存在争议,质疑者提出应有针对不同生物区系的水质基准。而这个问题在中国尤为突出。本文作者搜集了38种污染物对本地物种和非本地物种的毒性数据,比较了这些生物的HC₅和物种敏感度分布,结果显示,基于非本地物种推导的水质基准有74%的确定性可以有效保护中国的水生态系统。如果采用评价因子(AF=5)来校正基准,那么可以获得90%的确定性。
精选自Xiaowei Jin, Zijian Wang, Yeyao Wang, Yibing Lv, Kaifeng Rao, Wei Jin, John P. Giesy and Kenneth M. Y. Leung. Do water quality criteria based on nonnative species provide appropriate protection for native species? Environmental Toxicology and Chemistry: Volume 34, Issue 8, pages 1744–1750, August 2015. DOI: 10.1002/etc.2985
详情请见http://onlinelibrary.wiley.com/doi/10.1002/etc.2985/full     

基于非本地物种毒性数据推导出的水质基准可为本地物种提供适当保护吗？

基于非本地物种的毒性数据推导出的水质基准一直存在争议,质疑者提出应有针对不同生物区系的水质基准。而这个问题在中国尤为突出。本文作者搜集了38种污染物对本地物种和非本地物种的毒性数据,比较了这些生物的HC₅和物种敏感度分布,结果显示,基于非本地物种推导的水质基准有74%的确定性可以有效保护中国的水生态系统。如果采用评价因子(AF=5)来校正基准,那么可以获得90%的确定性。
精选自Xiaowei Jin, Zijian Wang, Yeyao Wang, Yibing Lv, Kaifeng Rao, Wei Jin, John P. Giesy and Kenneth M. Y. Leung. Do water quality criteria based on nonnative species provide appropriate protection for native species? Environmental Toxicology and Chemistry: Volume 34, Issue 8, pages 1744–1750, August 2015. DOI: 10.1002/etc.2985
详情请见http://onlinelibrary.wiley.com/doi/10.1002/etc.2985/full     

基于非本地物种毒性数据推导出的水质基准可为本地物种提供适当保护吗？

基于非本地物种的毒性数据推导出的水质基准一直存在争议,质疑者提出应有针对不同生物区系的水质基准。而这个问题在中国尤为突出。本文作者搜集了38种污染物对本地物种和非本地物种的毒性数据,比较了这些生物的HC₅和物种敏感度分布,结果显示,基于非本地物种推导的水质基准有74%的确定性可以有效保护中国的水生态系统。如果采用评价因子(AF=5)来校正基准,那么可以获得90%的确定性。
精选自Xiaowei Jin, Zijian Wang, Yeyao Wang, Yibing Lv, Kaifeng Rao, Wei Jin, John P. Giesy and Kenneth M. Y. Leung. Do water quality criteria based on nonnative species provide appropriate protection for native species? Environmental Toxicology and Chemistry: Volume 34, Issue 8, pages 1744–1750, August 2015. DOI: 10.1002/etc.2985
详情请见http://onlinelibrary.wiley.com/doi/10.1002/etc.2985/full