Assessing Influences of Hydrology,Physicochemistry, and Habitat on Stream Fish Assemblages Across a Changing Landscape1

Abstract: We evaluated the impact of land cover on fish assemblages by examining relationships between stream hydrology, physicochemistry, and instream habitat and their association with fish responses in streams draining 18 watersheds of the Lower Piedmont of western Georgia. Several important relationships between land use and physicochemical, hydrological, and habitat parameters were observed, particularly higher frequency of spate flows, water temperatures, and lower dissolved oxygen (DO) with percentage impervious surface (IS) cover, higher habitat quality with percentage forest cover, and elevated suspended solid concentrations with percentage pasture cover. Fish assemblages were largely explained by physicochemical and hydrological rather than habitat variables. Specifically, fish species diversity, richness, and biotic integrity were lower in streams that received high frequency of spate flows. Also, overall fish assemblage structure as determined by nonmetric multidimensional scaling was best described by total dissolved solids (TDS) and DO, with high TDS and low DO streams containing sunfish‐based assemblages and low TDS and high DO streams containing minnow‐based assemblages. Our results suggest that altered hydrological and physicochemical conditions, induced largely by IS, may be a strong determinant of fish assemblage structure in these lowland streams and allow for a more mechanistic understanding of how land use ultimately affects these systems.     

Linear Superposition in Total Maximum Daily Loads Applications: The Steady‐State Response Matrix Revisited1

Abstract: The steady‐state response matrix has historically proved a valuable tool in computing the water quality response to loadings and in providing insight into the relative impact of individual loading sources. The insight obtained may be is particularly useful in modern applications of increasingly complex water quality models to problems involving multiple point and nonpoint sources, such as in the assessment of total maximum daily loads (TMDLs). Where appropriate and the underlying equations linear, the steady‐state response matrix can be used to synthesize the results of more complicated models and present them in a way easily understood by policy makers. A straightforward method is presented for generating the response matrix using complex models, and example applications discussed. Example applications include a simple demonstration; incorporation of the method into the Mississippi Department of Environmental Quality’s STREAM model used in TMDL development; a TMDL modeling study of the Grand Calumet River and Indiana Harbor Canal, Indiana, using CE‐QUAL‐ICM; and a TMDL modeling study of the Big Sunflower River, Mississippi, using the Water Analysis Simulation Program model.     

MODELING THE BIG BLACK RIVER: A COMPARISON OF WATER QUALITY MODELS1

ABSTRACT: The Mississippi Department of Environmental Quality uses the Steady Riverine Environmental Assessment Model (STREAM) to establish effluent limitations. While the U.S. Environmental Protection Agency has approved of its use, questions arise regarding the model's simplicity. The objective of this research was to compare STREAM with the more commonly utilized Enhanced Stream Water Quality Model (QUAL2E). The comparison involved a statistical evaluation procedure based on sensitivity analyses, input probability distribution functions, and Monte Carlo simulation with site‐specific data from a 46‐mile (74‐km) reach of the Big Black River in central Mississippi. Site specific probability distribution functions were derived from measured rates of reaeration, sediment oxygen demand, photosynthesis, and respiration. Both STREAM and QUAL2E reasonably predicted daily average dissolved oxygen (DO) based on a comparison of output probability distributions with observed DO. Observed DO was consistently within 90 percent confidence intervals of model predictions. The STREAM approach generally overpredicted while QUAL2E generally matched observed DO. Using the more commonly assumed lognormal distribution as opposed to a Weibull distribution for two of the sensitive input parameters resulted in minimal differences in the statistical evaluations. The QUAL2E approach had distinct advantages over STREAM in simulating the growth cycle of algae.     

A Tool for Modeling the Winter Oxygen Depletion Rate in Arctic Lakes1

Abstract: Many arctic lakes freeze completely in winter. The few that retain unfrozen water for the entire winter period serve as overwintering fish habitat. In addition to serving as fish habitat, water in arctic lakes is needed for industrial and domestic use. Permits for water extraction seek to maximize water use without impacting dissolved oxygen (DO) levels and endangering fish habitat. The relationship between lake volume, winter DO budget, and extraction of water through pumping has historically not been well understood. A management model that could estimate end‐of‐winter DO would improve our understanding of the potential impacts of different management strategies. Using under‐ice DO measurements (November to April) taken from two natural lakes and one flooded gravel mine on the North Slope of Alaska, a physically based model was developed to predict end‐of‐winter DO concentration, water‐column DO profiles, and winter oxygen depletion rate in arctic lakes during periods of ice cover. Comparisons between the measured and model‐predicted oxygen profiles in the three study lakes suggest that the depth‐based DO modeling tool presented herein can be used to adequately predict the amount of DO available in arctic lakes throughout winter.     

Reducing risks of maintenance dredging on freshwater mussels (Unionidae) in the Big Sunflower River, Mississippi

In response to proposed dredging in a 122-km reach of the Big Sunflower River, Mississippi, we studied freshwater mussels (family: Unionidae) using qualitative, semi-quantitative, and quantitative (0.25 m(2) total substratum removal) methods in 1987, 1993, 1994, 2001, 2002, and 2003. Our objectives were to identify important mussel resources, to devise methods for minimizing dredging risks, and to identify habitat improvement features. Approximately 60% of the fauna was located on two high-density shoals characterized by extreme dominance of the commercially valuable threeridge (Amblema plicata). Shallow nearshore and main channel areas comprised approximately 10 and 88% of the aquatic habitat in the project area; however, these areas were of less importance for mussels and supported densities of approximately 5 and 0.5 individuals/m(2), respectively. Throughout the project area the mussel fauna exhibited little or no evidence of recent recruitment, dominance of relatively few species (either A. plicata, or the bank climber Plectomerus dombeyanus), and low species diversity (H') and evenness. No federally listed endangered or threatened mussels were found, although the pyramid pigtoe (Pleurobema pyramidatum), a species listed as endangered in Mississippi, was collected in and upstream of the project area. Two other state-listed species, Plethobasus cyphyus (sheepnose) and Quadrula cylindrica (rabbitsfoot), were only found on gravelly shoals upriver of the project area. Maintenance plans were redesigned to minimize environmental damage; a hydraulic cutterhead dredge will be used in most of the mainstem to reduce risk to nearshore habitats. High-density assemblages on four shoals will not be dredged and 150 and 100 m buffer zones will be left immediately up and downriver. Enhancements for aquatic biota will be created with gravel substratum and wing dams.     

A Regional‐Scale Habitat Suitability Model to Assess the Effects of Flow Reduction on Fish Assemblages in Michigan Streams1

Zorn, Troy G., Paul W. Seelbach, and Edward S. Rutherford, 2012. A Regional‐Scale Habitat Suitability Model to Assess the Effects of Flow Reduction on Fish Assemblages in Michigan Streams. Journal of the American Water Resources Association (JAWRA) 48(5): 871‐895. DOI: 10.1111/j.1752‐1688.2012.00656.x Abstract: In response to concerns over increased use and potential diversion of Michigan’s freshwater resources, and the resulting state legislative mandate, an advisory council created an integrated assessment model to determine the potential for water withdrawals to cause an adverse resource impact to fish assemblages in Michigan’s streams. As part of this effort, we developed a model to predict how fish assemblages characteristic of different stream types would change in response to decreased stream base flows. We describe model development and use in this case study. The model uses habitat suitability information (i.e., catchment size, base‐flow yield, and July mean water temperature) for over 40 fish species to predict assemblage structure in an individual river segment under a range of base‐flow reductions. By synthesizing model runs for individual fish species at representative segments for each of Michigan’s 11 ecological stream types, we developed curves describing how typical fish assemblages in each type respond to flow reduction. Each stream type‐specific, fish response curve was used to identify streamflow reduction levels resulting in adverse resource impacts to characteristic fish populations, the regulatory standard. Used together with a statewide map of stream types, our model provided a spatially comprehensive framework for evaluating impacts of flow withdrawals on biotic communities across a diverse regional landscape.     

Effects of channel incision on base flow stream habitats and fishes

Channel incision is a widespread phenomenon that results in stream and riparian habitat degradation. Fishes and physical habitat variables were sampled at base flow from three incised stream channels and one reference stream in northwest Mississippi, USA, to quantify incision effects on fish habitat and provide a basis for habitat rehabilitation planning and design. Incised channels were sampled in spring and autumn; the reference channel was sampled only in the autumn. Incised channel habitat quality was inferior to the reference channel despite the presence of structures designed to restore channel stability. Incised channels had physical habitat diversity levels similar to a nonincised reference channel, but contained fewer types of habitat. At base flow, incised channels were dominated by shallow, sandy habitats, moderate to high mean local Froude numbers, and had relatively little organic debris in their beds. In contrast, the reference stream had greater mean water depth, contained more woody debris, and provided more deep pool habitat. Fish assemblages in incised channels were composed of smaller fishes representing fewer species relative to the reference site. Fish species richness was directly proportional to the mean local Froude number, an indicator of the availability of pool habitat.     

Reach‐Scale Comparison of Habitat and Mollusk Assemblages for Select Sites in the Clinch River with Regional Context

Several hypotheses, including habitat degradation and variation in fluvial geomorphology, have been posed to explain extreme spatial and temporal variation in Clinch River mollusk assemblages. We examined associations between mollusk assemblage metrics (richness, abundance, recruitment) and physical habitat (geomorphology, streambed composition, fish habitat, and riparian condition) at 10 sites selected to represent the range of current assemblage condition in the Clinch River. We compared similar geomorphological units among reaches, employing semi‐quantitative and quantitative protocols to characterize mollusk assemblages and a mix of visual assessments and empirical measurements to characterize physical habitat. We found little to no evidence that current assemblage condition was associated with 54 analyzed habitat metrics. When compared to other sites in the Upper Tennessee River Basin (UTRB) that once supported or currently support mollusk assemblages, Clinch River sites were more similar to each other, representing a narrower range of conditions than observed across the larger geographic extent of the UTRB. A post‐hoc analysis suggested stream size and average boundary shear stress at bankfull stage may have historically limited species richness in the UTRB (p < 0.001). Associations between mollusk assemblages and physical habitat in the UTRB and Clinch River currently appear obscured by other factors limiting richness, abundance, and recruitment.     

REACH SCALE HYDRAULIC ASSESSMENT OF INSTREAM SALMONID HABITAT RESTORATION1

ABSTRACT: This study investigates the use of a two‐dimensional hydrodynamic model (River2D) for an assessment of the effects of instream large woody debris and rock groyne habitat structures. The bathymetry of a study reach (a side channel of the Chilliwack River located in southwestern British Columbia) was surveyed after the installation of 11 instream restoration structures. A digital elevation model was developed and used with a hydrodynamic model to predict local velocity, depth, scour, and habitat characteristics. The channel was resurveyed after the fall high‐flow season during which a bankfull event occurred. Pre‐flood and post‐flood bathymetry pool distributions were compared. Measured scour was compared to predicted shear and pre‐flood and post‐flood fish habitat indices for coho salmon (Oncorhynchus kisutch) and steelhead trout (O. mykiss) were compared. Two‐dimensional flow model velocity and depth predictions compare favorably to measured field values with mean standard errors of 24 percent and 6 percent, respectively, while areas of predicted high shear coincide with the newly formed pool locations. At high flows, the fish habitat index used (weighted usable area) increased by 150 percent to 210 percent. The application of the hydrodynamic model indicated a net habitat benefit from the restoration activities and provides a means of assessing and optimizing planned works.     

Fish diversity,habitat ecology and their conservation and management issues of a tropical River in Ganga basin,India

In the present communication habitat ecology, species diversity; distribution and different indices of fish biodiversity management were studied in a Central India river (River Betwa, a tributary of River Ganga basin approved under India’s first river linking plan). Correlation between fish species richness with the hydrological attributes showed good relationship and water depth, dissolved oxygen and pH were found the most important variables in shaping fish assemblage. Altogether, sixty-three fish species belonging to 20 families and 45 genera were collected from five sampling stations spread along the upstream, mid stream and lower streams. Cyprinids were the most dominated group represented by 26 species belonging to 15 genera, followed by Bagridae (6 species from 3 genera), and Schilbeidae (4 species from 4 genera). The distribution of fish showed interesting pattern and about 10% species were common to all the sites showing long migration range. Shannon-Weiner diversity index showed considerable variation and ranged from 1.89 to 3.51. Out of 63 species status of 10 species were not known due to data deficit, 29 categorized as lower risk, 14 as vulnerable, 8 as endangered, while the remaining two species were introduced. Our study shows that the River supports considerable diversity of the fishes and is important for conservation and about 34% fish fauna is threatened being either vulnerable or endangered. We assessed that the river supports considerable percentage of food fish (89.47), ornamental fish (49.12%) and sport fish (5.26%). Among the eight major types of fish habitats identified along the entire stretch of river, open river, shallow water and deep pools were habitats contributing maximum diversity. Fish species richness (FSR) were significantly different (P < 0.05) in all the habitats except channel confluence and scour pool. Trophic niche model may be useful for assessing altered as well as less altered fish habitat of the tropical rivers. Since this river will be interlinked in near future, this study would be useful for conservation planning and management and also for future assessment after interlinking. Issues related to various threats to aquatic environment and conservation management strategies have been discussed.     

Spatial and Temporal Evaluation of Hydrological Response to Climate and Land Use Change in Three South Dakota Watersheds

This study analyzed changes in hydrology between two recent decades (1980s and 2010s) with the Soil and Water Assessment Tool (SWAT) in three representative watersheds in South Dakota: Bad River, Skunk Creek, and Upper Big Sioux River watersheds. Two SWAT models were created over two discrete time periods (1981‐1990 and 2005‐2014) for each watershed. National Land Cover Datasets 1992 and 2011 were, respectively, ingested into 1981‐1990 and 2005‐2014 models, along with corresponding weather data, to enable comparison of annual and seasonal runoff, soil water content, evapotranspiration (ET), water yield, and percolation between these two decades. Simulation results based on the calibrated models showed that surface runoff, soil water content, water yield, and percolation increased in all three watersheds. Elevated ET was also apparent, except in Skunk Creek watershed. Differences in annual water balance components appeared to follow changes in land use more closely than variation in precipitation amounts, although seasonal variation in precipitation was reflected in seasonal surface runoff. Subbasin‐scale spatial analyses revealed noticeable increases in water balance components mostly in downstream parts of Bad River and Skunk Creek watersheds, and the western part of Upper Big Sioux River watershed. Results presented in this study provide some insight into recent changes in hydrological processes in South Dakota watersheds. Editor's note: This paper is part of the featured series on SWAT Applications for Emerging Hydrologic and Water Quality Challenges. See the February 2017 issue for the introduction and background to the series.     

Effects of Management Legacies on Stream Fish and Aquatic Benthic Macroinvertebrate Assemblages

Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002–2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence–absence, relative abundance, Index of Biotic Integrity for fish (IBI_F)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBI_BM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat, particularly the amount of overhanging vegetation and fine sediment. This research illustrates the importance of using multiple taxa for biological assessments and the need to consider management legacies when investigating responses to management and conservation actions.     

A Spatially Explicit Resource-Based Approach for Managing Stream Fishes in Riverscapes

The article describes a riverscape approach based on landscape ecology concepts, which aims at studying the multiscale relationships between the spatial pattern of stream fish habitat patches and processes depending on fish movements. A review of the literature shows that few operational methods are available to study this relationship due to multiple methodological and practical challenges inherent to underwater environments. We illustrated the approach with literature data on a cyprinid species (Barbus barbus) and an actual riverscape of the Seine River, France. We represented the underwater environment of fishes for different discharges using two-dimensional geographic information system-based maps of the resource habitat patches, defined according to activities (feeding, resting, and spawning). To quantify spatial patterns at nested levels (resource habitat patch, daily activities area, subpopulation area), we calculated their composition, configuration, complementation, and connectivity with multiple spatial analysis methods: patch metrics, moving-window analysis, and least cost modeling. The proximity index allowed us to evaluate habitat patches of relatively great value, depending on their spatial context, which contributes to the setting of preservation policies. The methods presented to delimit potential daily activities areas and subpopulation areas showed the potential gaps in the biological connectivity of the reach. These methods provided some space for action in restoration schemes.     

Validation of an Invertebrate Community Index for Urban Streams for an Alabama Coastal Plains Watershed1

Abstract: The purpose of this study was to validate the application of an invertebrate community index (ICI) to assess the biological integrity of urban streams. Validation involved comparing chemical and habitat data to ICI scores from 20 urban streams and four least‐impacted streams in the Choctawhatchee and Pea River watersheds located in Southeast Alabama. Chemical and habitat data were collected to support whether the ICI accurately predicts the health of the streams. A significant difference between urban and least‐impacted ICI scores, habitat evaluation scores, chemical variables, taxa richness, and Shannon‐Wiener diversity were observed when urban sites were compared with least‐impacted sites using Mann‐Whitney U‐test. Urban sites having low ICI scores, low species richness and diversity, and poor habitat showed greater impairment than least‐impacted sites. Cluster analysis of macroinvertebrate assemblages indicated two clusters. Significant differences between clusters in habitat evaluations, chemical parameters, and ICI scores showed that some urban sites were more degraded than other urban sites in the study. Differentiation between least‐impacted and urban sites indicated that the ICI provided valid biotic assessments. Therefore, this study validated that the ICI is capable of predicting the biological integrity of urban streams in the Choctawhatchee and Pea River watersheds.     

Habitat Improvements and Fish Community Response Associated with an Agricultural Two‐Stage Ditch in Mower County,Minnesota

Water quality and stream habitat in agricultural watersheds are under greater scrutiny as hydrologic pathways are altered to increase crop production. Ditches have been traditionally constructed to remove water from agricultural lands. Little attention has been placed on alternative ditch designs that are more stable and provide greater habitat diversity for wildlife and aquatic species. In 2009, 1.89 km of a conventional drainage ditch in Mower County, Minnesota, was converted to a two‐stage ditch (TSD) with small, adjacent floodplains to mimic a natural system. Cross section surveys, conducted pre‐ and post‐construction, generally indicate a stable channel with minor adjustments over time. Vegetation surveys showed differences in species composition and biomass between the slopes and the benches, with changes ongoing. Longitudinal surveys demonstrated a 12‐fold increase in depth variability. Fish habitat quality improved with well‐sorted gravel riffles and deeper pool habitat. The biological response to improved habitat quality was investigated using a Fish Index of Biological Integrity (FIBI). Our results show higher FIBI scores post‐construction with scores more similar to natural streams. In summary, the TSD demonstrated improvements in riparian and instream habitat quality and fish communities, which showed greater fish species richness, higher percentages of gravel spawning fish, and better FIBI scores. This type of management tool could benefit ditches in other regions where gradient and geology allow.     

Modeled Summer Background Concentration of Nutrients and Suspended Sediment in the Mid‐Continent (USA) Great Rivers1

Angradi, Ted R., David W. Bolgrien, Matt A. Starry, and Brian H. Hill, 2012. Modeled Summer Background Concentration of Nutrients and Suspended Sediment in the Mid‐Continent (USA) Great Rivers. Journal of the American Water Resources Association (JAWRA) 48(5): 1054‐1070. DOI: 10.1111/j.1752‐1688.2012.00669.x Abstract: We used regression models to predict summer background concentration of total nitrogen (N), total phosphorus (P), and total suspended solids (TSS), in the mid‐continent great rivers: the Upper Mississippi, the Lower Missouri, and the Ohio. From multiple linear regressions of water quality indicators with land use and other stressor variables, we determined the concentration of the indicators when the predictor variables were all set to zero — the y‐intercept. Except for total P on the Upper Mississippi River, we could predict background concentration using regression models. Predicted background concentration of total N was about the same on the Upper Mississippi and Lower Missouri Rivers (430 μg l^?1), which was lower than percentile‐based values, but was similar to concentrations derived from the response of sestonic chlorophyll a to great river total N concentration. Background concentration of total P on the Lower Missouri (65 μg l^?1) was also lower than published and percentile‐based concentrations. Background TSS concentration was higher on the Lower Missouri (40 mg l^?1) than the other rivers. Background TSS concentration on the Upper Mississippi (16 mg l^?1) was below a threshold (30 mg l^?1) designed to protect aquatic vegetation. Our model‐predicted concentrations for the great rivers are an attempt to estimate background concentrations for water quality indicators independent from thresholds based on percentiles or derived from stressor‐response relationships.     

Biodiversity,ecohydrology, threat status and conservation priority of the freshwater fishes of river Gomti,a tributary of river Ganga (India)

Extensive surveys were conducted to explore the diversity of fishes, distribution patterns, abundance, threat, and habitat status in the upper, middle, and lower stretch of river Gomti, a tributary of river Ganga. Altogether 56 fish species belonging to 20 families and 42 genera were collected from various sampling sites. Of the 56 species, five belong to the ‘endangered’ (EN) category and 11 belong to the vulnerable (VU) category. Six major categories of habitat were identified and pattern of fish assemblage and dominant genera in each habitat studied. Considerable differences were observed in the fish species richness and relative abundance (RA) of the species in the different sampling sites of river Gomti. Shannon–Wiener biodiversity index has been calculated for the fishes indicating considerable variation (p < 0.05) across the river. Apart from Indian Major Carps (Labeo rohita, Catla catla, Cirrhinus mrigala), Chitala chitala, Notopterus notopterus, Ompok pabda, O. bimaculatus, Labeo bata, L. calbasu, Cirrhinus reba, Channa marulius, Bagarius bagarius, and Clupisoma garua were the important species. All the species have been reported for the first time in this river. Indiscriminate catch, poisoning, using of fine mesh sized nets, dumping of sewage, siltation, water abstraction, changing land use pattern, decreased water discharge, and exotic species threaten the fish diversity. Urgent need exists for taking up research on the priority fish species and their habitat. Restoration measures have been proposed based on ecosystem scale approach for fish biodiversity conservation.     

Nutrient Sources and Transport in the Missouri River Basin,with Emphasis on the Effects of Irrigation and Reservoirs1

Brown, Juliane B., Lori A. Sprague, and Jean A. Dupree, 2011. Nutrient Sources and Transport in the Missouri River Basin, With Emphasis on the Effects of Irrigation and Reservoirs. Journal of the American Water Resources Association (JAWRA) 47(5):1034‐1060. DOI: 10.1111/j.1752‐1688.2011.00584.x Abstract: SPAtially Referenced Regressions On Watershed attributes (SPARROW) models were used to relate instream nutrient loads to sources and factors influencing the transport of nutrients in the Missouri River Basin. Agricultural inputs from fertilizer and manure were the largest nutrient sources throughout a large part of the basin, although atmospheric and urban inputs were important sources in some areas. Sediment mobilized from stream channels was a source of phosphorus in medium and larger streams. Irrigation on agricultural land was estimated to decrease the nitrogen load reaching the Mississippi River by as much as 17%, likely as a result of increased anoxia and denitrification in the soil zone. Approximately 16% of the nitrogen load and 33% of the phosphorus load that would have otherwise reached the Mississippi River was retained in reservoirs and lakes throughout the basin. Nearly half of the total attenuation occurred in the eight largest water bodies. Unlike the other major tributary basins, nearly the entire instream nutrient load leaving the outlet of the Platte and Kansas River subbasins reached the Mississippi River. Most of the larger reservoirs and lakes in the Platte River subbasin are upstream of the major sources, whereas in the Kansas River subbasin, most of the source inputs are in the southeast part of the subbasin where characteristics of the area and proximity to the Missouri River facilitate delivery of nutrients to the Mississippi River.     

The Fish Fauna of the Doubs River Prior to Completion of the Rhine–Rhône Connection

/ The part of the Doubs River between Montbeliard and Dole (France), i.e., downstream from the confluence with the Allan River, will be affected by the Rhine- Rhone connection project. In order to improve the understanding of the Doubs ichthyofauna, aquatic environments of the Doubs were sampled by electrofishing. Fish diversity and the presence of some rheophilic species demonstrated the good ecological quality of some stretches of the Doubs. This quality was due to alternating areas with very diversified aquatic environments (riffles, islands and side-arms, backwaters) and a considerable range of flow velocities. The differences in the structure of the fish communities of the different types of aquatic environments were more qualitative (fish species) than quantitative (number of species and number of fish). However, the mean number of fish was statistically lower in the canals (Freycinet canal and channelized part of the Allan River) than in the main course and in the backwaters. The natural parts of the Doubs (unnavigable reaches) showed the most diversified environmental structure and had the most rheophilic fish communities. Thus, the rheophilic species were well represented, but they proved also the most vulnerable to river regulation. However, the most abundant fishes throughout the Doubs River were generalists with no special requirements for food sources or spawning substrate.KEY WORDS: Fish communities; Regulation; Restoration; Floodplain; Large ship canal; Doubs River