UVC Inactivation of dsDNA and ssRNA Viruses in Water: UV Fluences and a qPCR-Based Approach to Evaluate Decay on Viral Infectivity

Disinfection by low-pressure monochromatic ultraviolet (UVC) radiation (253.7 nm) became an important technique to sanitize drinking water and also wastewater in tertiary treatments. In order to prevent the transmission of waterborne viral diseases, the analysis of the disinfection kinetics and the quantification of infectious viral pathogens and indicators are highly relevant and need to be addressed. The families Adenoviridae and Polyomaviridae comprise human and animal pathogenic viruses that have been also proposed as indicators of fecal contamination in water and as Microbial Source Tracking tools. While it has been previously suggested that dsDNA viruses may be highly resistant to UVC radiation compared to other viruses or bacteria, no information is available on the stability of polyomavirus toward UV irradiation. Here, the inactivation of dsDNA (HAdV2 and JCPyV) and ssRNA (MS2 bacteriophage) viruses was analyzed at increasing UVC fluences. A minor decay of 2-logs was achieved for both infectious JC polyomaviruses (JCPyV) and human adenoviruses 2 (HAdV2) exposed to a UVC fluence of 1,400 J/m², while a decay of 4-log was observed for MS2 bacteriophages (ssRNA). The present study reveals the high UVC resistance of dsDNA viruses, and the UV fluences needed to efficiently inactivate JCPyV and HAdV2 are predicted. Furthermore, we show that in conjunction with appropriate mathematical models, qPCR data may be used to accurately estimate virus infectivity.     

“Arabidobrassica”: Plant-genome engineering by protoplast fusion

After fusion of somatic cells (isolated protoplasts) of Arabidopsis thaliana and Brassica campestris, plants could be regenerated in which genetic material from parents of taxonomically different tribes is combined. Between these regenerants asymmetric hybrids have also been obtained, in which one parental genome is represented by reduced chromosome numbers. Results concerning the analysis and genesis of these plants are used to discuss the question whether such monster plants are of any importance.     

Cercaricidal activity of some essential oils of plants from Brazil

Extended screening tests on the cercaricidal activity of various plants from northeast Brazil have shown that the extracts of the leaves and fruits ofPiper marginatum,Protium heptaphyllum, andCapsicum annuum show a remarkable effect on the cercaria ofSchistosoma mansoni. In the case of the oils ofPiper marginatum andCapsicum annuum, 90–96% of the cercaria ofSchistosoma mansoni were killed within 15 min. According to the NMR spectra, the active principles of the extracts seem to be water-soluble unsaturated compounds from the oils or their hydrolysis products. Natural substances provide an attractive alternative for preventive actions against schistosomiasis, as the perturbation of the ecological equilibrium of natural waters can be avoided in this manner.     

A new pheromone of the silkworm moth Bombyx mori

The female silkmoth Bombyx mori L. emits a second pheromone component bombykal (E-10, Z-12-hexade-cadien-1-al) in addition to the well-known sexual attractant bombykol (E-10, Z-12-hexadecadien-1-ol). Bombykal stimulates its own specialized and highly sensitive olfactory cells of the male moth. Surprisingly, the aldehyde inhibits the release of the male's wing-fluttering response to bombykol.     

Accumulation fatty acids of in Chlorella vulgaris under heterotrophic conditions in relation to activity of acetyl-CoA carboxylase,temperature, and co-immobilization with Azospirillum brasilense

The relation between fatty acid accumulation, activity of acetyl-CoA carboxylase (ACC), and consequently lipid accumulation was studied in the microalgae Chlorella vulgaris co-immobilized with the plant growth-promoting bacterium Azospirillum brasilense under dark heterotrophic conditions with Na acetate as a carbon source. In C. vulgaris immobilized alone, cultivation experiments for 6 days showed that ACC activity is directly related to fatty acid accumulation, especially in the last 3 days. In co-immobilization experiments, A. brasilense exerted a significant positive effect over ACC activity, increased the quantity in all nine main fatty acids, increased total lipid accumulation in C. vulgaris, and mitigated negative effects of nonoptimal temperature for growth. No correlation between ACC activity and lipid accumulation in the cells was established for three different temperatures. This study demonstrated that the interaction between A. brasilense and C. vulgaris has a significant effect on fatty acid and lipid accumulation in the microalgae.     

The oldest micropepline beetle from Cretaceous Burmese amber and its phylogenetic implications (Coleoptera: Staphylinidae)

The staphylinid subfamily Micropeplinae includes small strongly sclerotized beetles with truncate elytra leaving the most part of abdomen exposed. Fossil micropeplines are rare and confined to Cenozoic representatives of extant genera. Here, we describe the oldest micropepline, Protopeplus cretaceus gen. and sp. n., from the Upper Cretaceous Burmese amber. Fluorescence microscope and confocal laser scanning microscopy (CLSM) were both used to reveal diagnostic features of Micropeplinae and some primitive traits that place Protopeplus very basally within Micropeplinae.     

Transfer-RNA: The early adaptor

Evolutionary history of tRNA is studied by comparative sequence analysis of two specified tRNA's at various phylogenetic levels and of tRNA families within four different species. Criteria are developed that allow 1) to distinguish between convergent and divergent evolution, 2) to determine the mechanism of divergence and 3) to estimate the degree of randomization of the variable parts of the sequences. The conclusion of these investigations is that tRNA's represent ancient molecules that existed in the form of a mutant distribution prior to their integration into genomes.     

Early diagenetic alterations of biogenetic organic compounds

Plant matter from a beech forest, leaves, and soil were extracted and analyzed by GC-MS technique. The amount of the extract varies with the CPI value. Characteristic compounds like phytadienes, plant alcohols, polycyclic aromatics, sterols, and triterpenes are observed in different samples at various concentrations. It seems there is a rapid change in the composition of extracts from recent plant material during early diagenesis based on reactions such as hydrolysis, dehydration, oxidation, and polymerization.     

Egyptian blue — Cuprorivaite a window to ancient Egyptian technology

Egyptian Blue, a multicomponent synthetic blue pigment has been recorded in ancient Egypt since the Fourth Dynasty of the Old Kingdom (2600–2480 B.C.). The pigment consisting of cuprorivaite (CaCuSi₄O₁₀) with variable amounts of wollastonite (CaSiO₃), Cu-rich glass and cuprite (Cu₃O) or tenorite (CuO) was prepared by melting the copper-rich ingredient with lime and desert sand. Low melting temperatures (below 742 °C) were achieved by addition of flux-like plant ashes. The high quality of the pigments collected from monuments of the Fifth Dynasty (2480–2320 B.C.) may indicate that the first manufacture was in early dynastic or perhaps predynastic eras. During the reign of Thutmosis III (18th Dynasty, 1490–1436 B.C.) probably bronze filings were first applied as starting material, thus indicating a technological innovation. This new method was employed till the Roman times.     

On the kinetics of acetylcholine at the synapse

Electrophysiologic, morphologic, and biochemical definitions of the synapse will be correlated spatially and temporally. Postsynaptic fatigue and facilitation follow oscillations of the free pool of acetylcholine, predicted by the kinetic theory and observed at the electric organ of Torpedo marmorata. The underlying thermodynamic instability exhibits properties of the Na⁺—K⁺-dependent hydrolysis of adenosine triphosphate and represents a necessary condition for synaptic memory.     

Simultaneous Concentration of Bovine Viruses and Agricultural Zoonotic Bacteria from Water Using Sodocalcic Glass Wool Filters

Infiltration and runoff from manured agricultural fields can result in livestock pathogens reaching groundwater and surface waters. Here, we measured the effectiveness of glass wool filters to simultaneously concentrate enteric viruses and bacteria of bovine origin from water. The recovery efficiencies were determined for bovine viral diarrhea virus types 1 and 2, bovine rotavirus group A, bovine coronavirus, poliovirus Sabin III, toxigenic Escherichia coli ,and Campylobacter jejuni seeded into water with three different turbidity levels (0.5, 215, and 447 NTU). Twenty liters of dechlorinated tap water (pH 7) were seeded with the test organisms, and then passed through a glass wool filter using a peristaltic pump (flow rate = 1 liter min^?1). Retained organisms were eluted from the filters by passing beef extract-glycine buffer (pH 9.5) in the direction opposite of sample flow. Recovered organisms were enumerated by qPCR except for C. jejuni, which was quantified by culture. Mean recovery efficiencies ranged from 55 to 33 % for the bacteria and 58 to 16 % for the viruses. Using bootstrapping techniques combined with Analysis of Variance, recovery efficiencies were found to differ among the pathogen types tested at the two lowest turbidity levels; however, for a given pathogen type turbidity did not affect recovery except for C. jejuni. Glass wool filtration is a cost-effective method for concentrating several waterborne pathogens of bovine origin simultaneously, although recovery may be low for some specific taxa such as bovine viral diarrhea virus 1.     

Qualitative and Quantitative Assessment of Hepatitis A Virus in Wastewaters in Tunisia

Hepatitis A causes substantial morbidity in both industrialized and non-industrialized countries and represents an important health problem in several southern Mediterranean countries. The objectives of the study were as follows: (a) to assess the occurrence of hepatitis A virus (HAV) in Tunisia through the monitoring of urban wastewaters collected at wastewater treatment plants (WTPs); (b) to characterize environmental strains; and (c) to estimate the viral load in raw and treated sewages, in order to evaluate the potential impact on superficial waters receiving discharges. A total of 150 raw and treated wastewaters were collected from three WTPs and analyzed by both qualitative (RT-PCR/nested) and quantitative (qRT-PCR) methods. Of these, 100 (66 %) were found to be positive for HAV by the qualitative assay: 68.3 % in influents and 64.7 % in effluents. The vast majority of HAV sequences belonged to sub-genotype IA, with 11 different strains detected found to be identical to clinical strains isolated from Tunisian patients with acute hepatitis. Five unique variants were also detected, not previously reported in clinical cases. Only two IB strains were found, confirming the rarity of this sub-genotype in this country. The results of the present study indicate a wide circulation of the pathogen in the population, most probably in the form of asymptomatic infections, a finding consistent with the classification of the country as having intermediate/high endemicity. Quantitative data showed high viral loads in influents (3.5E+05 genome copies/liter, mean value) as well as effluents (2.5E+05 genome copies/liter, mean value), suggesting that contaminated water could be a critical element in transmission.     

Soil infertility in the Amazonian rain forest

Extensive mineral alteration in the older land surfaces of the eastern Amazonian lowland has led to complete impoverishment of the soils in respect of their inorganic nutrient contents. Large-scale use of this area for agricultural purposes seems impossible. In the western Amazonian lowland, younger land surfaces (Pliocene) have developed along with Pleistocene flood plains. The mineral alteration in the soil profiles of this area, which are partly characterized by poor drainage, has resulted in impoverishment of soils to a lesser degree. These soils can be used to a limited extent for agricultural purposes, especially at the level of a subsistence economy.     

The phylogeny of archaebacteria,including novel anaerobic thermoacidophiles in the light of RNA polymerase structure

DNA-dependent RNA polymerases of archaebacteria are distinct from those of eubacteria both in structure and in function. They show similarities to those of the eukaryotic cytoplasm. Extremely thermophilic anaerobic sulfur-respiring archaebacteria isolated from solfataric waters represent four different families, the Thermoproteaceae, the “stiff filaments”, the Desulfurococcaceae and the Thermococcaceae, of a novel order, Thermoproteales. Together with the Sulfolobales, they form the second branch of the urkingdom of the archaebacteria besides that of the methanogens and extreme halophiles. Thermoplasma appears isolated.     

Small scale farmers’ vulnerability to climatic changes in southern Benin: the importance of farmers’ perceptions of existing institutions

Farmers in rural Africa use a number of adaptive strategies to cope with observed climatic changes and their impacts on agriculture. Most studies on adaptive capacity focus on socio-economic parameters (such as poverty or education), and few provide detailed analysis on the role played by different institutions at local level, and the effects of how these institutions are perceived on farmers’ adaptation. Semi-structured interviews were conducted among 46 households from seven villages in southern Benin (West Africa), and among representatives of several institutions at the local level. Half the participants were involved in Non Governmental Organizations (NGOs) development projects and half were independent farmers. Results indicate that independent farmers mostly use non-agricultural coping strategies (loans, work in town) while project farmers mainly use agricultural adaptive strategies (improved seed varieties). Lack of adaptive capacity of independent farmers is linked to weak State institutions at the local level. Due to their lack of efficiency and high corruption rates, local State representatives are mistrusted. NGOs are trusted and seek for help, even by independent farmers. Even if NGOs do not have climate change adaptation in their agendas, they promote activities, which help reduce farmers’ vulnerability. Although our results are limited to south-western Benin, they question the way adaptation is promoted today, for instance through the United Nations Framework Convention for Climate Change (through the National Adaptation Programmes of Action).     

The electromotor system of Torpedo

The electric organ of Torpedo, besides providing abundant amounts of cholinoceptive post-synaptic membrane for the isolation of the acetylcholine receptor protein, is a rich source of cholinergic nerve terminals. Using perfused, innervated tissue blocks from which synaptic vesicles in different functional states can be isolated, much information can be obtained about synaptic-vesicle dynamics. So far this is consistent with the view that the synaptic vesicles are the source of transmitter released on stimulation and that uptake of newly synthesized transmitter by the vesicles is dependent on their having discharged their previous charge of transmitter in at least one cycle of exo- and endocytosis. Studies of the protein composition of the vesicle membrane, especially when combined with similar information about the external presynaptic membrane, purified samples of which are now available from synaptosome (T-sac) preparations, promise to throw new light on the molecular mechanism underlying vesicle exo-/endocytosis.     

Is naïveté forever? Alien predator and aggressor recognition by two endemic island reptiles

The disproportionate impacts of invasive predators are often attributed to the naïveté (i.e., inefficient or non-existing anti-predator behavior) of island native species having evolved without such predators. Naïveté has long been regarded as a fixed characteristic, but a few recent studies indicate a capacity for behavioral adaptation in native species in contact with alien predators. Here, we tested whether two reptiles endemic to New Caledonia, a skink, Caledoniscincus austrocaledonicus, and a gecko, Bavayia septuiclavis, recognized and responded to the odor of six introduced species (two rodents, the feral cat, and three species of ants). We used an experimental design in which reptiles had a choice of retreat sites with or without the odor of predators or aggressors. Skinks avoided two or three of the predators, whereas geckos avoided at most one. These results suggest that diurnal skinks are more responsive than nocturnal geckos to the odor of introduced predators. Neither skinks nor geckos avoided the three species of ants. Thus, the odors of alien predators are shown to influence retreat site selection by two native island reptiles. Moreover, the study suggests that this loss of naïveté varies among native species, probably as a consequence of the intensity of the threat and of time since introduction. These findings argue for re-thinking the behavioral flexibility of ectothermic reptiles in terms of their responses to biological invasion.     

Toward drugs derived from cannabis

Recent work aimed at the introduction of natural and synthetic cannabinoids as drugs is reviewed. Δ¹-Tetrahydrocannabinol (Δ¹-THC) is mainly investigated as a potential drug against glaucoma and asthma, and as an antiemetic agent in cancer chemotherapy. Cannabidiol is being tried in the clinic against epilepsy and as a hypnotic. Numerous synthetic cannabinoids are currently being investigated as analgetics and as sedative-relaxants.     

When xenarthrans had enamel: insights on the evolution of their hypsodonty and paleontological support for independent evolution in armadillos

All xenarthrans known to date are characterized by having permanent teeth that are both high crowned and open rooted, i.e., euhypsodont, and with a type of hypsodonty different from that of the rest of Placentalia: dentine hypsodonty. Also, most xenarthrans lack enamel; however, its presence has been reported in the fossil armadillo Utaetus buccatus and in living Dasypus. Considering the divergence of Xenarthra from other eutherians that possessed enameled teeth, the absence of enamel is a derived character. Diverse specializations are known in the dentition of xenarthrans, but the primitive pattern of their teeth and dentitions is still unknown. Here, we describe the mandible and teeth of a fossil armadillo, Astegotherium dichotomus (Astegotheriini, Dasypodidae), from the early Middle Eocene of Argentine Patagonia, with teeth showing both true enamel and closed roots. It is the oldest xenarthran with mandibular remains exhibiting protohypsodonty and is therefore likely representative of ancestral cingulates and xenarthrans generally. Astegotherium supports a recent hypothesis based on molecular data that enamel loss occurred independently not only within xenarthrans but also within dasypodid armadillos.